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Volumn 188, Issue 17, 2006, Pages 6429-6434

Positive selection in the ComC-ComD system of streptococcal species

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; COMPETENCE STIMULATING PEPTIDE; PEPTIDE; UNCLASSIFIED DRUG;

EID: 33749004815     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.00484-06     Document Type: Article
Times cited : (6)

References (31)
  • 1
    • 0031855362 scopus 로고    scopus 로고
    • Development of competence in Streptococcus pneumoniae: Pheromone autoinduction and control of quorum sensing by the oligopeptide permease
    • Alloing, G., B. Martin, C. Granadel, and J.-P. Claverys. 1998. Development of competence in Streptococcus pneumoniae: pheromone autoinduction and control of quorum sensing by the oligopeptide permease. Mol. Microbiol. 29:75-83.
    • (1998) Mol. Microbiol. , vol.29 , pp. 75-83
    • Alloing, G.1    Martin, B.2    Granadel, C.3    Claverys, J.-P.4
  • 2
    • 0042208362 scopus 로고    scopus 로고
    • Effect of recombination on the accuracy of the likelihood method for detecting positive selection at amino acid sites
    • Anisimova, M., R. Nielsen, and Z. Yang. 2003. Effect of recombination on the accuracy of the likelihood method for detecting positive selection at amino acid sites. Genetics 164:1229-1236.
    • (2003) Genetics , vol.164 , pp. 1229-1236
    • Anisimova, M.1    Nielsen, R.2    Yang, Z.3
  • 3
    • 0346991737 scopus 로고    scopus 로고
    • Diversifying selection at the Bacillus quorum-sensing locus and determinants of modification specificity during synthesis of the ComX pheromone
    • Ansaldi, M., and D. Dubnau. 2004. Diversifying selection at the Bacillus quorum-sensing locus and determinants of modification specificity during synthesis of the ComX pheromone. J. Bacteriol. 186:15-21.
    • (2004) J. Bacteriol. , vol.186 , pp. 15-21
    • Ansaldi, M.1    Dubnau, D.2
  • 4
    • 16444378767 scopus 로고    scopus 로고
    • Evidence of positive Darwinian selection in Omp85, a highly conserved bacterial outer membrane protein essential for cell viability
    • Fitzpatrick, D. A., and J. O. McInerney. 2005. Evidence of positive Darwinian selection in Omp85, a highly conserved bacterial outer membrane protein essential for cell viability. J. Mol. Evol. 60:268-273.
    • (2005) J. Mol. Evol. , vol.60 , pp. 268-273
    • Fitzpatrick, D.A.1    McInerney, J.O.2
  • 5
    • 20844444771 scopus 로고    scopus 로고
    • Competence-programmed predation of noncompetent cells in the human pathogen Streptococcus pneumoniae: Genetic requirements
    • Guiral, S., T. J. Mitchell, B. Martin, and J.-P. Claverys. 2005. Competence-programmed predation of noncompetent cells in the human pathogen Streptococcus pneumoniae: genetic requirements. Proc. Natl. Acad. Sci. USA 102:8710-8715.
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 8710-8715
    • Guiral, S.1    Mitchell, T.J.2    Martin, B.3    Claverys, J.-P.4
  • 6
    • 0028845364 scopus 로고
    • An unmodified heptadecapeptide pheromone induces competence for genetic transformation in Streptococcus pneumoniae
    • Håvarstein, L. S., G. Coomaraswamy, and D. A. Morrison. 1995. An unmodified heptadecapeptide pheromone induces competence for genetic transformation in Streptococcus pneumoniae. Proc. Natl. Acad. Sci. USA 92:11140-11144.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 11140-11144
    • Håvarstein, L.S.1    Coomaraswamy, G.2    Morrison, D.A.3
  • 7
    • 0029781001 scopus 로고    scopus 로고
    • Identification of the streptococcal competence-pheromone receptor
    • Håvarstein, L. S., P. Gaustad, I. F. Nes, and D. A. Morrison. 1996. Identification of the streptococcal competence-pheromone receptor. Mol. Microbiol. 21:863-869.
    • (1996) Mol. Microbiol. , vol.21 , pp. 863-869
    • Håvarstein, L.S.1    Gaustad, P.2    Nes, I.F.3    Morrison, D.A.4
  • 8
    • 0030668266 scopus 로고    scopus 로고
    • Natural competence in the genus Streptococcus: Evidence that streptococci can change pherotype by interspecies recombinational exchanges
    • Håvarstein, L. S., R. Hakenbeck, and P. Gaustad. 1997. Natural competence in the genus Streptococcus: evidence that streptococci can change pherotype by interspecies recombinational exchanges. J. Bacteriol. 179:6589-6594.
    • (1997) J. Bacteriol. , vol.179 , pp. 6589-6594
    • Håvarstein, L.S.1    Hakenbeck, R.2    Gaustad, P.3
  • 9
    • 33645081479 scopus 로고    scopus 로고
    • New insights into the pneumococcal fratricide: Relationship to clumping and identification of a novel immunity factor
    • Håvarstein, L. S., B. Martin, O. Johnsborg, C. Granadel, and J. P. Claverys. 2006. New insights into the pneumococcal fratricide: relationship to clumping and identification of a novel immunity factor. Mol. Microbiol. 59:1297-1307.
    • (2006) Mol. Microbiol. , vol.59 , pp. 1297-1307
    • Håvarstein, L.S.1    Martin, B.2    Johnsborg, O.3    Granadel, C.4    Claverys, J.P.5
  • 10
    • 33644747756 scopus 로고    scopus 로고
    • A hydrophobic patch in the competence-stimulating peptide, a pneumococcal competence pheromone, is essential for specificity and biological activity
    • Johnsborg, O., P. E. Kristiansen, T. Blomqvist, and L. S. Håvarstein. 2006. A hydrophobic patch in the competence-stimulating peptide, a pneumococcal competence pheromone, is essential for specificity and biological activity. J. Bacteriol. 188:1744-1749.
    • (2006) J. Bacteriol. , vol.188 , pp. 1744-1749
    • Johnsborg, O.1    Kristiansen, P.E.2    Blomqvist, T.3    Håvarstein, L.S.4
  • 11
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • H. N. Munro (ed.), Academic Press, Inc., New York, N.Y.
    • Jukes, T. H., and C. R. Cantor. 1969. Evolution of protein molecules, p. 21-132. In H. N. Munro (ed.), Mammalian protein metabolism III. Academic Press, Inc., New York, N.Y.
    • (1969) Mammalian Protein Metabolism III , pp. 21-132
    • Jukes, T.H.1    Cantor, C.R.2
  • 12
    • 0034819230 scopus 로고    scopus 로고
    • Genetic algorithm-based maximum-likelihood analysis for molecular phylogeny
    • Katoh, K., K. Kuma, and T. Miyata. 2001. Genetic algorithm-based maximum-likelihood analysis for molecular phylogeny. J. Mol. Evol. 53:477-484.
    • (2001) J. Mol. Evol. , vol.53 , pp. 477-484
    • Katoh, K.1    Kuma, K.2    Miyata, T.3
  • 13
    • 21144431739 scopus 로고    scopus 로고
    • Choline-binding protein D (CbpD) in Streptococcus pneumoniae is essential for competence-induced cell lysis
    • Kausmally, L., O. Johnsborg, M. Lunde, E. Knutsen, and L. S. Håvarstein. 2005. Choline-binding protein D (CbpD) in Streptococcus pneumoniae is essential for competence-induced cell lysis. J. Bacteriol. 187:4338-4345.
    • (2005) J. Bacteriol. , vol.187 , pp. 4338-4345
    • Kausmally, L.1    Johnsborg, O.2    Lunde, M.3    Knutsen, E.4    Håvarstein, L.S.5
  • 14
    • 0032816642 scopus 로고    scopus 로고
    • Identification of a new regulator in Streptococcus pneumoniae linking quorum sensing to competence for genetic transformation
    • Lee, M. S., and D. A. Morrison. 1999. Identification of a new regulator in Streptococcus pneumoniae linking quorum sensing to competence for genetic transformation. J. Bacteriol. 181:5004-5016.
    • (1999) J. Bacteriol. , vol.181 , pp. 5004-5016
    • Lee, M.S.1    Morrison, D.A.2
  • 15
    • 0035135976 scopus 로고    scopus 로고
    • Natural genetic transformation of Streptococcus mutans growing in biofilms
    • Li, Y. H., P. C. Lau, J. H. Lee, R. P. Ellen, and D. G. Cvitkovitch. 2001. Natural genetic transformation of Streptococcus mutans growing in biofilms. J. Bacteriol. 183:897-908.
    • (2001) J. Bacteriol. , vol.183 , pp. 897-908
    • Li, Y.H.1    Lau, P.C.2    Lee, J.H.3    Ellen, R.P.4    Cvitkovitch, D.G.5
  • 16
    • 14544293686 scopus 로고    scopus 로고
    • Positive selection in the carbohydrate recognition domains of sea urchin sperm receptor for egg jelly (suREJ) proteins
    • Mah, S. A., W. J. Swanson, and V. D. Vacquier. 2005. Positive selection in the carbohydrate recognition domains of sea urchin sperm receptor for egg jelly (suREJ) proteins. Mol. Biol. Evol. 22:533-541.
    • (2005) Mol. Biol. Evol. , vol.22 , pp. 533-541
    • Mah, S.A.1    Swanson, W.J.2    Vacquier, V.D.3
  • 17
    • 0006226387 scopus 로고
    • Extraordinarily high evolutionary rate of pseudogenes: Evidence for the presence of selective pressure against changes between synonymous codons
    • Miyata, T., and H. Hayashida. 1981. Extraordinarily high evolutionary rate of pseudogenes: evidence for the presence of selective pressure against changes between synonymous codons. Proc. Natl. Acad. Sci. USA 78:5739-5743.
    • (1981) Proc. Natl. Acad. Sci. USA , vol.78 , pp. 5739-5743
    • Miyata, T.1    Hayashida, H.2
  • 18
    • 0019134329 scopus 로고
    • Molecular evolution of mRNA: A method for estimating evolutionary rates of synonymous and amino acid substitutions from homologous nucleotide sequences and its application
    • Miyata, T., and T. Yasunaga. 1980. Molecular evolution of mRNA: a method for estimating evolutionary rates of synonymous and amino acid substitutions from homologous nucleotide sequences and its application. J. Mol. Evol. 16:23-36.
    • (1980) J. Mol. Evol. , vol.16 , pp. 23-36
    • Miyata, T.1    Yasunaga, T.2
  • 19
    • 0019151964 scopus 로고
    • Nucleotide sequence divergence of mouse immunoglobulin gamma 1 and gamma 2b chain genes and the hypothesis of intervening sequence-mediated domain transfer
    • Miyata, T., T. Yasunaga, Y. Yamawaki-Kataoka, M. Obata, and T. Honjo. 1980. Nucleotide sequence divergence of mouse immunoglobulin gamma 1 and gamma 2b chain genes and the hypothesis of intervening sequence-mediated domain transfer. Proc. Natl. Acad. Scei. USA 77:2143-2147.
    • (1980) Proc. Natl. Acad. Scei. USA , vol.77 , pp. 2143-2147
    • Miyata, T.1    Yasunaga, T.2    Yamawaki-Kataoka, Y.3    Obata, M.4    Honjo, T.5
  • 20
    • 7644243116 scopus 로고    scopus 로고
    • Release of DNA into the medium by competent Streptococcus pneumoniae: Kinetics, mechanism and stability of the liberated DNA
    • Moscoso, M., and J.-P. Claverys. 2004. Release of DNA into the medium by competent Streptococcus pneumoniae: kinetics, mechanism and stability of the liberated DNA. Mol. Microbiol. 54:783-794.
    • (2004) Mol. Microbiol. , vol.54 , pp. 783-794
    • Moscoso, M.1    Claverys, J.-P.2
  • 21
    • 0029745349 scopus 로고    scopus 로고
    • Regulation of competence for genetic transformation in Streptococcus pneumoniae by an auto-induced peptide pheromone and a two-component regulatory system
    • Pestova, E. V., L. S. Håvarstein, and D. A. Morrison. 1996. Regulation of competence for genetic transformation in Streptococcus pneumoniae by an auto-induced peptide pheromone and a two-component regulatory system. Mol. Microbiol. 21:853-862.
    • (1996) Mol. Microbiol. , vol.21 , pp. 853-862
    • Pestova, E.V.1    Håvarstein, L.S.2    Morrison, D.A.3
  • 22
    • 0029795692 scopus 로고    scopus 로고
    • Competence for genetic transformation in encapsulated strains of Streptococcus pneumoniae: Two allelic variants of the peptide pheromone
    • Pozzi, G., L. Masala, F. Iannelli, R. Manganelli, L. S. Håvarstein, L. Piccoli, D. Simon, and D. A. Morrison. 1996. Competence for genetic transformation in encapsulated strains of Streptococcus pneumoniae: two allelic variants of the peptide pheromone. J. Bacteriol. 178:6087-6090.
    • (1996) J. Bacteriol. , vol.178 , pp. 6087-6090
    • Pozzi, G.1    Masala, L.2    Iannelli, F.3    Manganelli, R.4    Håvarstein, L.S.5    Piccoli, L.6    Simon, D.7    Morrison, D.A.8
  • 24
    • 0031012364 scopus 로고    scopus 로고
    • In search of molecular Darwinism
    • Sharp, P. M. 1997. In search of molecular Darwinism. Nature 385:111-112.
    • (1997) Nature , vol.385 , pp. 111-112
    • Sharp, P.M.1
  • 25
    • 0037188501 scopus 로고    scopus 로고
    • Induction of natural competence in Streptococcus pneumoniae triggers lysis and DNA release from a subfraction of the cell population
    • Steinmoen, H., E. Knutsen, and L. S. Håvarstein. 2002. Induction of natural competence in Streptococcus pneumoniae triggers lysis and DNA release from a subfraction of the cell population. Proc. Natl. Acad. Sci. USA 99:7681-7686.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 7681-7686
    • Steinmoen, H.1    Knutsen, E.2    Håvarstein, L.S.3
  • 26
    • 0344666699 scopus 로고    scopus 로고
    • Competence-induced cells of Streptococcus pneumoniae lyse competence-deficient cells of the same strain during cocultivation
    • Steinmoen, H., A. Teigen, and L. S. Håvarstein. 2003. Competence-induced cells of Streptococcus pneumoniae lyse competence-deficient cells of the same strain during cocultivation. J. Bacteriol. 185:7176-7183.
    • (2003) J. Bacteriol. , vol.185 , pp. 7176-7183
    • Steinmoen, H.1    Teigen, A.2    Håvarstein, L.S.3
  • 27
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 28
    • 27944442272 scopus 로고    scopus 로고
    • Quorum sensing: Cell-to-cell communication in bacteria
    • Waters, C. M., and B. L. Bassler. 2005. Quorum sensing: cell-to-cell communication in bacteria. Annu. Rev. Cell Dev. Biol. 21:319-346.
    • (2005) Annu. Rev. Cell Dev. Biol. , vol.21 , pp. 319-346
    • Waters, C.M.1    Bassler, B.L.2
  • 29
    • 0032790625 scopus 로고    scopus 로고
    • Identification of DNA binding sites for ComE, a key regulator of natural competence in Streptococcus pneumoniae
    • Ween, O., P. Gaustad, and L. S. Håvarstein. 1999. Identification of DNA binding sites for ComE, a key regulator of natural competence in Streptococcus pneumoniae. Mol. Microbiol. 33:817-827.
    • (1999) Mol. Microbiol. , vol.33 , pp. 817-827
    • Ween, O.1    Gaustad, P.2    Håvarstein, L.S.3
  • 30
    • 0032909885 scopus 로고    scopus 로고
    • Genetic diversity of the streptococcal competence (com) gene locus
    • Whatmore, A. M., V. A. Barcus, and C. G. Dowson. 1999. Genetic diversity of the streptococcal competence (com) gene locus. J. Bacteriol. 181:3144-3154.
    • (1999) J. Bacteriol. , vol.181 , pp. 3144-3154
    • Whatmore, A.M.1    Barcus, V.A.2    Dowson, C.G.3
  • 31
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • Yang, Z. 1997. PAML: a program package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci. 13:555-556.
    • (1997) Comput. Appl. Biosci. , vol.13 , pp. 555-556
    • Yang, Z.1


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