메뉴 건너뛰기




Volumn 72, Issue 9, 2006, Pages 5720-5727

Haloalkane dehalogenase LinB is responsible for β- and δ-hexachlorocyclohexane transformation in Sphingobium indicum B90A

Author keywords

[No Author keywords available]

Indexed keywords

ALCOHOLS; CELLS; ISOMERS; LITHIUM COMPOUNDS; MUTAGENESIS; PHASE TRANSITIONS;

EID: 33748799126     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.00192-06     Document Type: Article
Times cited : (77)

References (55)
  • 1
    • 0002869950 scopus 로고
    • Contamination of rice and wheat grains with residues of HCH and DDT
    • Ahuja, A. K., and M. D. Awasthi. 1993. Contamination of rice and wheat grains with residues of HCH and DDT. Pestic. Res. J. 5:83-86.
    • (1993) Pestic. Res. J. , vol.5 , pp. 83-86
    • Ahuja, A.K.1    Awasthi, M.D.2
  • 3
    • 4344669229 scopus 로고    scopus 로고
    • Organochlorine pesticide residues in wheat and drinking water samples from Jaipur, Rajasthan, India
    • Bakore, N., P. J. John, and P. Bhatnagar. 2004. Organochlorine pesticide residues in wheat and drinking water samples from Jaipur, Rajasthan, India. Environ. Monit. Assess. 98:381-389.
    • (2004) Environ. Monit. Assess. , vol.98 , pp. 381-389
    • Bakore, N.1    John, P.J.2    Bhatnagar, P.3
  • 4
    • 0000007718 scopus 로고    scopus 로고
    • Persistent, ecotoxic and bioaccumulative compounds and their possible environmental effects
    • Ballschmiter, K. 1996. Persistent, ecotoxic and bioaccumulative compounds and their possible environmental effects. Pure Appl. Chem. 68:1771-1780.
    • (1996) Pure Appl. Chem. , vol.68 , pp. 1771-1780
    • Ballschmiter, K.1
  • 5
    • 23944446592 scopus 로고    scopus 로고
    • 16S rDNA phytogeny and distribution of lin genes in novel hexachlorocyclohexane-degrading Sphingomonas strains
    • Boltner, D., S. M. Morillas, and J. L. Ramos. 2005. 16S rDNA phytogeny and distribution of lin genes in novel hexachlorocyclohexane-degrading Sphingomonas strains. Environ. Microbiol. 7:1329-1338.
    • (2005) Environ. Microbiol. , vol.7 , pp. 1329-1338
    • Boltner, D.1    Morillas, S.M.2    Ramos, J.L.3
  • 6
    • 33645222793 scopus 로고    scopus 로고
    • Plasmid-encoded γ-hexachlorocyclohexane degradation genes and insertion sequences in Sphingobium francense (ex-Sphingomonas paucimobilis Sp+)
    • Cérémonie, H., H. Boubakri, P. Mavingui, P. Simonet, and T. M. Vogel. 2006. Plasmid-encoded γ-hexachlorocyclohexane degradation genes and insertion sequences in Sphingobium francense (ex-Sphingomonas paucimobilis Sp+). FEMS Microbiol. Lett. 257:243-252.
    • (2006) FEMS Microbiol. Lett. , vol.257 , pp. 243-252
    • Cérémonie, H.1    Boubakri, H.2    Mavingui, P.3    Simonet, P.4    Vogel, T.M.5
  • 8
    • 1842454814 scopus 로고    scopus 로고
    • Organization of genes and IS6100 among different strains of hexachlorocyclohexane-degrading Sphingomonas paucimobilis: Evidence for horizontal gene transfer
    • Dogra, C., V. Raina, R. Pal, M. Suar, S. Lal, K. H. Gartemann, C. Holliger, J. R. van der Meer, and R. Lal. 2004. Organization of genes and IS6100 among different strains of hexachlorocyclohexane-degrading Sphingomonas paucimobilis: evidence for horizontal gene transfer. J. Bacteriol. 186:2225-2235.
    • (2004) J. Bacteriol. , vol.186 , pp. 2225-2235
    • Dogra, C.1    Raina, V.2    Pal, R.3    Suar, M.4    Lal, S.5    Gartemann, K.H.6    Holliger, C.7    Van Der Meer, J.R.8    Lal, R.9
  • 12
    • 0031712774 scopus 로고    scopus 로고
    • Degradation of alpha, beta, gamma, and delta hexachlorocyclohexane by Sphingomonas paucimobilis
    • Johri, A. K., M. Dua, D. Tuteja, R. Saxena, D. M. Saxena, and R. Lal. 1998. Degradation of alpha, beta, gamma, and delta hexachlorocyclohexane by Sphingomonas paucimobilis. Biotechnol. Lett. 20:885-887.
    • (1998) Biotechnol. Lett. , vol.20 , pp. 885-887
    • Johri, A.K.1    Dua, M.2    Tuteja, D.3    Saxena, R.4    Saxena, D.M.5    Lal, R.6
  • 13
    • 0033019742 scopus 로고    scopus 로고
    • Seasonal impacts on β-hexachlorocyclohexane concentration in soil solution
    • Kalbitz, K., and P. Popp. 1999. Seasonal impacts on β- hexachlorocyclohexane concentration in soil solution. Environ. Pollut. 106:139-141.
    • (1999) Environ. Pollut. , vol.106 , pp. 139-141
    • Kalbitz, K.1    Popp, P.2
  • 14
    • 0030634729 scopus 로고    scopus 로고
    • Organochlorine pesticides and polychlorinated biphenyls in foodstuffs from Asian and oceanic countries
    • Kannan, K., S. Tanabe, J. P. Giesy, and R. Tatsukawa. 1997. Organochlorine pesticides and polychlorinated biphenyls in foodstuffs from Asian and oceanic countries. Rev. Environ. Contam. Toxicol. 152:1-55.
    • (1997) Rev. Environ. Contam. Toxicol. , vol.152 , pp. 1-55
    • Kannan, K.1    Tanabe, S.2    Giesy, J.P.3    Tatsukawa, R.4
  • 16
    • 0030998438 scopus 로고    scopus 로고
    • Functional analysis of a variety of chimeric dioxygenases constructed from two biphenyl dioxygenases that are similar structurally but different functionally
    • Kimura, N., A. Nishi, M. Goto, and K. Furukawa. 1997. Functional analysis of a variety of chimeric dioxygenases constructed from two biphenyl dioxygenases that are similar structurally but different functionally. J. Bacteriol. 179:3936-3943.
    • (1997) J. Bacteriol. , vol.179 , pp. 3936-3943
    • Kimura, N.1    Nishi, A.2    Goto, M.3    Furukawa, K.4
  • 17
    • 14644406189 scopus 로고    scopus 로고
    • Quantitative analysis of substrate specificity of haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26
    • Kmunicek, J., K. Hynkova, T. Jedlicka, Y. Nagata, A. Negri, F. Gago, R. C. Wade, and J. Damborsky. 2005. Quantitative analysis of substrate specificity of haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26. Biochemistry 44:3390-3401.
    • (2005) Biochemistry , vol.44 , pp. 3390-3401
    • Kmunicek, J.1    Hynkova, K.2    Jedlicka, T.3    Nagata, Y.4    Negri, A.5    Gago, F.6    Wade, R.C.7    Damborsky, J.8
  • 18
    • 20044391444 scopus 로고    scopus 로고
    • Enhanced biodegradation of β- and δ- hexachlorocyclohexane in the presence of α- and γ-HCH in contaminated soils
    • Kumar, M., P. Chaudhary, M. Dwivedi, R. Kumar, D. Paul, R. K. Jain, S. K. Garg, and A. Kumar. 2005. Enhanced biodegradation of β- and δ- hexachlorocyclohexane in the presence of α- and γ-HCH in contaminated soils. Environ. Sci. Technol. 39:4005-4011.
    • (2005) Environ. Sci. Technol. , vol.39 , pp. 4005-4011
    • Kumar, M.1    Chaudhary, P.2    Dwivedi, M.3    Kumar, R.4    Paul, D.5    Jain, R.K.6    Garg, S.K.7    Kumar, A.8
  • 20
    • 0025964939 scopus 로고
    • Organochlorine pesticides and polychlorinated biphenyls in human adipose tissue
    • Kutz, F. W., P. H. Wood, and D. P. Bottimore. 1991. Organochlorine pesticides and polychlorinated biphenyls in human adipose tissue. Rev. Environ. Contam. Toxicol. 120:1-82.
    • (1991) Rev. Environ. Contam. Toxicol. , vol.120 , pp. 1-82
    • Kutz, F.W.1    Wood, P.H.2    Bottimore, D.P.3
  • 21
    • 33644545035 scopus 로고    scopus 로고
    • Diversity, distribution and divergence of lin genes in hexachlorocyclohexane-degrading sphingomonads
    • Lal, R., C. Dogra, S. Malhotra, P. Sharma, and R. Pal. 2006. Diversity, distribution and divergence of lin genes in hexachlorocyclohexane-degrading sphingomonads. Trends Biotechnol. 24:121-130.
    • (2006) Trends Biotechnol. , vol.24 , pp. 121-130
    • Lal, R.1    Dogra, C.2    Malhotra, S.3    Sharma, P.4    Pal, R.5
  • 23
    • 0030201071 scopus 로고    scopus 로고
    • Biotransformation α-, β-, γ- and δ- hexachlorocyclohexane under methanogenic conditions
    • Middledorp, P. J. M., M. Jaspers, A. J. B. Zehnder, and G. Schraa. 1996. Biotransformation α-, β-, γ- and δ-hexachlorocyclohexane under methanogenic conditions. Environ. Sci. Technol. 30:2345-2349.
    • (1996) Environ. Sci. Technol. , vol.30 , pp. 2345-2349
    • Middledorp, P.J.M.1    Jaspers, M.2    Zehnder, A.J.B.3    Schraa, G.4
  • 24
    • 33644960166 scopus 로고    scopus 로고
    • Distribution and phylogeny of hexachlorocyclohexane-degrading bacteria in soils from Spain
    • Mohn, W. W., B. Mertens, J. D. Neufeld, W. Verstraete, and V. de Lorenzo. 2006. Distribution and phylogeny of hexachlorocyclohexane-degrading bacteria in soils from Spain. Environ. Microbiol. 8:60-68.
    • (2006) Environ. Microbiol. , vol.8 , pp. 60-68
    • Mohn, W.W.1    Mertens, B.2    Neufeld, J.D.3    Verstraete, W.4    De Lorenzo, V.5
  • 25
    • 0035986482 scopus 로고    scopus 로고
    • Organochlorine insecticide residues in drinking and ground water in and around Delhi
    • Mukherjee, I., and M. Gopal. 2002. Organochlorine insecticide residues in drinking and ground water in and around Delhi. J. Environ. Monit. Assess. 76:185-193.
    • (2002) J. Environ. Monit. Assess. , vol.76 , pp. 185-193
    • Mukherjee, I.1    Gopal, M.2
  • 26
    • 84871380178 scopus 로고
    • Purification and characterization of γ-hexachlorocyclohexane (γ-HCH) dehydrochlorinase (LinA) from Pseudomonas paucimobilis
    • Nagata, Y., T. Hatta, R. Imai, K. Kimbara, M. Fukuda, K. Yano, and M. Takagi. 1993. Purification and characterization of γ-hexachlorocyclohexane (γ-HCH) dehydrochlorinase (LinA) from Pseudomonas paucimobilis. Biosci. Biotechnol. Biochem. 57:1582-1583.
    • (1993) Biosci. Biotechnol. Biochem. , vol.57 , pp. 1582-1583
    • Nagata, Y.1    Hatta, T.2    Imai, R.3    Kimbara, K.4    Fukuda, M.5    Yano, K.6    Takagi, M.7
  • 28
    • 0033229896 scopus 로고    scopus 로고
    • Construction and characterization of histidine tagged haloalkane dehalogenase (LinB) of a new substrate class from a γ- hexachlorocyclohexane degrading bacterium Sphingomonas paucimobilis UT26
    • Nagata, Y., K. Hynkova, J. Damborsky, and M. Takagi. 1999. Construction and characterization of histidine tagged haloalkane dehalogenase (LinB) of a new substrate class from a γ-hexachlorocyclohexane degrading bacterium Sphingomonas paucimobilis UT26. Protein Expr. Purif. 17:299-304.
    • (1999) Protein Expr. Purif. , vol.17 , pp. 299-304
    • Nagata, Y.1    Hynkova, K.2    Damborsky, J.3    Takagi, M.4
  • 29
    • 0033387054 scopus 로고    scopus 로고
    • Complete analysis of genes and enzymes for γ-hexachlorocyclohexane degradation in Sphingomonas paucimobilis UT26
    • Nagata, Y., K. Miyauchi, and M. Takagi. 1999. Complete analysis of genes and enzymes for γ-hexachlorocyclohexane degradation in Sphingomonas paucimobilis UT26. J. Ind. Microbiol. Biotechnol. 23:380-390.
    • (1999) J. Ind. Microbiol. Biotechnol. , vol.23 , pp. 380-390
    • Nagata, Y.1    Miyauchi, K.2    Takagi, M.3
  • 30
    • 0030853537 scopus 로고    scopus 로고
    • Purification and characterization of a haloalkane dehalogenase of a new substrate class from a γ-hexachlorocyclohexane-degrading bacterium, Sphingomonas paucimobilis UT26
    • Nagata, Y., K. Miyauchi, J. Damborsky, K. Manova, A. Ansorgova, and M. Takagi. 1997. Purification and characterization of a haloalkane dehalogenase of a new substrate class from a γ-hexachlorocyclohexane-degrading bacterium, Sphingomonas paucimobilis UT26. Appl. Environ. Microbiol. 63:3707-3710.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 3707-3710
    • Nagata, Y.1    Miyauchi, K.2    Damborsky, J.3    Manova, K.4    Ansorgova, A.5    Takagi, M.6
  • 32
    • 0037402893 scopus 로고    scopus 로고
    • Determination of organochlorine pesticides in agricultural soil with special reference to γ-HCH degradation by Pseudomonas strains
    • Nawab, A., A. Aleem, and A. Malik. 2003. Determination of organochlorine pesticides in agricultural soil with special reference to γ-HCH degradation by Pseudomonas strains. Biores. Technol. 88:41-46.
    • (2003) Biores. Technol. , vol.88 , pp. 41-46
    • Nawab, A.1    Aleem, A.2    Malik, A.3
  • 33
    • 0942301386 scopus 로고    scopus 로고
    • Crystal structure of haloalkane dehalogenase LinB from Sphingomomas paucimobilis UT26 at 0.95A resolution: Dynamics of catalytic residues
    • Oakley, A. J., M. Klvana, M. Otyepka, Y. Nagata, M. C. J. Wilce, and J. Damborsky. 2004. Crystal structure of haloalkane dehalogenase LinB from Sphingomomas paucimobilis UT26 at 0.95A resolution: dynamics of catalytic residues. Biochemistry 43:870-878.
    • (2004) Biochemistry , vol.43 , pp. 870-878
    • Oakley, A.J.1    Klvana, M.2    Otyepka, M.3    Nagata, Y.4    Wilce, M.C.J.5    Damborsky, J.6
  • 34
    • 0042844816 scopus 로고    scopus 로고
    • Residual concentration of hexachlorocyclohexane in a contaminated site in Cidade dos Meninos, Duque de Caxias, Rio de Janeiro, Brazil, after calcium oxide treatment
    • Oliveira, R. M., L. H. Bastos, A. E. Dias, S. A. Silva, and J. C. Moreira. 2003. Residual concentration of hexachlorocyclohexane in a contaminated site in Cidade dos Meninos, Duque de Caxias, Rio de Janeiro, Brazil, after calcium oxide treatment. Cad. Saude Publica 19:447-453.
    • (2003) Cad. Saude Publica , vol.19 , pp. 447-453
    • Oliveira, R.M.1    Bastos, L.H.2    Dias, A.E.3    Silva, S.A.4    Moreira, J.C.5
  • 35
    • 33748797500 scopus 로고    scopus 로고
    • The impact of persistent organochlorine contaminant (lindane, γ-HCH): Histopathological alterations in fish tissues
    • Ortiz, J. B., M. L. Gonzalez de Canales, and C. Sarasquete. 2001. The impact of persistent organochlorine contaminant (lindane, γ-HCH): histopathological alterations in fish tissues. Ecotoxicol. Environ. Restor. 4:45-52.
    • (2001) Ecotoxicol. Environ. Restor. , vol.4 , pp. 45-52
    • Ortiz, J.B.1    Gonzalez De Canales, M.L.2    Sarasquete, C.3
  • 37
    • 0036226117 scopus 로고    scopus 로고
    • Functionally relevant motions of haloalkane dehalogenases occur in the specificity-modulating cap domains
    • Otyepka, M., and J. Damborsky. 2002. Functionally relevant motions of haloalkane dehalogenases occur in the specificity-modulating cap domains. Protein Sci. 11:1206-1217.
    • (2002) Protein Sci. , vol.11 , pp. 1206-1217
    • Otyepka, M.1    Damborsky, J.2
  • 38
    • 26244458524 scopus 로고    scopus 로고
    • The hexachlorocyclohexane-degrading bacterial strains Sphingomonas paucimobilis B90A, UT26 and Sp+, having similar lin genes, are three distinct species, Sphingobium indicum sp. nov., Sphingobium japonicum sp. nov. and Sphingobium francense sp. nov., and reclassification of (Sphingomonas) chungbukensis as Sphingobium chungbukense comb. nov
    • Pal, R., S. Bala, M. Dadhwal, M. Kumar, G. Dhingra, O. Prakash, S. R. Prabagaran, S. Shivaji, J. Cullum, C. Holliger, and R. Lal. 2005. The hexachlorocyclohexane-degrading bacterial strains Sphingomonas paucimobilis B90A, UT26 and Sp+, having similar lin genes, are three distinct species, Sphingobium indicum sp. nov., Sphingobium japonicum sp. nov. and Sphingobium francense sp. nov., and reclassification of (Sphingomonas) chungbukensis as Sphingobium chungbukense comb. nov. Int. J. Syst. Evol. Microbiol. 55:1965-1972.
    • (2005) Int. J. Syst. Evol. Microbiol. , vol.55 , pp. 1965-1972
    • Pal, R.1    Bala, S.2    Dadhwal, M.3    Kumar, M.4    Dhingra, G.5    Prakash, O.6    Prabagaran, S.R.7    Shivaji, S.8    Cullum, J.9    Holliger, C.10    Lal, R.11
  • 39
    • 6444229312 scopus 로고    scopus 로고
    • Residues of hexachlorocyclohexane isomers in soil and water samples from Delhi and adjoining areas
    • Prakash, O., M. Suar, V. Raina, C. Dogra, R. Pal, and R. Lal. 2004. Residues of hexachlorocyclohexane isomers in soil and water samples from Delhi and adjoining areas. Curr. Sci. 87:73-77.
    • (2004) Curr. Sci. , vol.87 , pp. 73-77
    • Prakash, O.1    Suar, M.2    Raina, V.3    Dogra, C.4    Pal, R.5    Lal, R.6
  • 41
    • 0025133035 scopus 로고
    • Degradation of alpha-, beta-, and gamma- hexachlorocyclohexane by a soil bacterium under aerobic conditions
    • Sahu, S. K., K. K. Patnaik, M. Sharmila, and N. Sethunathan. 1990. Degradation of alpha-, beta-, and gamma- hexachlorocyclohexane by a soil bacterium under aerobic conditions. Appl. Environ. Microbiol. 56:3620-3622.
    • (1990) Appl. Environ. Microbiol. , vol.56 , pp. 3620-3622
    • Sahu, S.K.1    Patnaik, K.K.2    Sharmila, M.3    Sethunathan, N.4
  • 43
    • 0034820675 scopus 로고    scopus 로고
    • Monitoring of pesticide residues in summer fruits and vegetables from Kanpur, India
    • Sanghi, R., and V. Tewari. 2001. Monitoring of pesticide residues in summer fruits and vegetables from Kanpur, India. Bull. Environ. Contam. Toxicol. 67:587-593.
    • (2001) Bull. Environ. Contam. Toxicol. , vol.67 , pp. 587-593
    • Sanghi, R.1    Tewari, V.2
  • 44
    • 0002174737 scopus 로고
    • Isolation and identification of an aerobic γ-HCH-decomposing bacterium from soil
    • Senoo, K., and H. Wada. 1989. Isolation and identification of an aerobic γ-HCH-decomposing bacterium from soil. Soil Sci. Plant Nutr. 35:79-87.
    • (1989) Soil Sci. Plant Nutr. , vol.35 , pp. 79-87
    • Senoo, K.1    Wada, H.2
  • 45
    • 0028970669 scopus 로고
    • Global distribution of persistent organochlorine compounds
    • Simonich, S. L., and R. A. Hites. 1995. Global distribution of persistent organochlorine compounds. Science 269:1851-1854.
    • (1995) Science , vol.269 , pp. 1851-1854
    • Simonich, S.L.1    Hites, R.A.2
  • 46
    • 0034978003 scopus 로고    scopus 로고
    • Comparison of organochlorine pesticide levels in soil and groundwater of Agra, India
    • Singh, R. P. 2001. Comparison of organochlorine pesticide levels in soil and groundwater of Agra, India. Bull. Environ. Contam. Toxicol. 67:126-132.
    • (2001) Bull. Environ. Contam. Toxicol. , vol.67 , pp. 126-132
    • Singh, R.P.1
  • 47
    • 0041823656 scopus 로고    scopus 로고
    • Haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26: X-ray crystallographic studies of dehalogenation of brominated substrates
    • Streltsov, V. A., Z. Prokop, J. Damborsky, Y. Nagata, and M. C. J. Wilce. 2003. Haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26: X-ray crystallographic studies of dehalogenation of brominated substrates. Biochemistry 42:10104-10112.
    • (2003) Biochemistry , vol.42 , pp. 10104-10112
    • Streltsov, V.A.1    Prokop, Z.2    Damborsky, J.3    Nagata, Y.4    Wilce, M.C.J.5
  • 48
    • 8744228122 scopus 로고    scopus 로고
    • Dynamics of multiple lin gene expression in Sphingomonas paucimobilis B90A in response to different hexachlorocyclohexane isomers
    • Suar, M., J. R. van der Meer, K. Lawlor, C. Holliger, and R. Lal. 2004. Dynamics of multiple lin gene expression in Sphingomonas paucimobilis B90A in response to different hexachlorocyclohexane isomers. Appl. Environ. Microbiol. 70:6650-6656.
    • (2004) Appl. Environ. Microbiol. , vol.70 , pp. 6650-6656
    • Suar, M.1    Van Der Meer, J.R.2    Lawlor, K.3    Holliger, C.4    Lal, R.5
  • 50
    • 33748767221 scopus 로고    scopus 로고
    • note
    • Reference deleted.
  • 53
    • 33644551007 scopus 로고    scopus 로고
    • Inventories of obsolete pesticide stocks in central and Eastern Europe
    • E. Elbestawy, L. Moklyachuk, V. Pidlisnyuk, N. Schulz, T. Stefanovska, and J. Vijgen (ed.), Kiev, Ukraine. International HCH and Pesticides Association, Holte, Denmark
    • Willem, J. K., and I. Wollent. 2005. Inventories of obsolete pesticide stocks in central and Eastern Europe, p. 37-39. In E. Elbestawy, L. Moklyachuk, V. Pidlisnyuk, N. Schulz, T. Stefanovska, and J. Vijgen (ed.), Proceedings of the 7th International HCH and Pesticides Forum, Kiev, Ukraine. International HCH and Pesticides Association, Holte, Denmark.
    • (2005) Proceedings of the 7th International HCH and Pesticides Forum , pp. 37-39
    • Willem, J.K.1    Wollent, I.2
  • 55
    • 0042430629 scopus 로고    scopus 로고
    • Long-term exposure to beta-hexachlorocyclohexane (beta-HCH) promotes transformation and invasiveness of MCF-7 human breast cancer cells
    • Zou, E., and F. Matsumura. 2005. Long-term exposure to beta-hexachlorocyclohexane (beta-HCH) promotes transformation and invasiveness of MCF-7 human breast cancer cells. Biochem. Pharmacol. 66:831-840.
    • (2005) Biochem. Pharmacol. , vol.66 , pp. 831-840
    • Zou, E.1    Matsumura, F.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.