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Volumn 53, Issue 5, 2006, Pages 358-363

Population genetic structure of Carchesium polypinum (Ciliophora: Peritrichia) in four Chinese lakes inferred from ISSR fingerprinting: High diversity but low differentiation

Author keywords

Biodiversity; Gene flow; Genetic differentiation; Genetic diversity; Peritrichous ciliate

Indexed keywords

ANCESTRY; BIODIVERSITY; CILIATE; CLUSTER ANALYSIS; DNA; GENE FLOW; GENETIC ANALYSIS; GENETIC DIFFERENTIATION; GENETIC STRUCTURE; ISOLATED POPULATION; MOLECULAR ANALYSIS; MORPHOLOGY; POPULATION GENETICS; PRINCIPAL COMPONENT ANALYSIS;

EID: 33748625482     PISSN: 10665234     EISSN: 15507408     Source Type: Journal    
DOI: 10.1111/j.1550-7408.2006.00113.x     Document Type: Article
Times cited : (13)

References (51)
  • 1
    • 0032495215 scopus 로고    scopus 로고
    • Diversity and geographic distribution of riboprints from three cosmopolitan species of Colpoda Müller (Ciliophora, Colpodea)
    • Bowers, N., Kroll, T. T. & Pratt, J. R. 1998. Diversity and geographic distribution of riboprints from three cosmopolitan species of Colpoda Müller (Ciliophora, Colpodea). Eur. J. Protistol., 34:341-347.
    • (1998) Eur. J. Protistol. , vol.34 , pp. 341-347
    • Bowers, N.1    Kroll, T.T.2    Pratt, J.R.3
  • 2
    • 0025980624 scopus 로고
    • An isoenzyme study of naturally occurring clones of Trypanosoma cruzi isolated from both sides of the West Andes highland
    • Brenière, S. F., Braquemond, P., Solari, A., Agnèse, J. F. & Tibayrenc, M. 1991. An isoenzyme study of naturally occurring clones of Trypanosoma cruzi isolated from both sides of the West Andes highland. Trans. R. Soc. Trop. Med. Hyg., 85:62-66.
    • (1991) Trans. R. Soc. Trop. Med. Hyg. , vol.85 , pp. 62-66
    • Brenière, S.F.1    Braquemond, P.2    Solari, A.3    Agnèse, J.F.4    Tibayrenc, M.5
  • 3
    • 0033578591 scopus 로고    scopus 로고
    • Clonal variation in a Florida Bay Thalassia testudinum meadow: Molecular genetic assessment of population structure
    • Davis, J. L., Childers, L. D. & Kuhn, N. D. 1999. Clonal variation in a Florida Bay Thalassia testudinum meadow: molecular genetic assessment of population structure. Mar. Ecol. Prog. Ser., 186:127-136.
    • (1999) Mar. Ecol. Prog. Ser. , vol.186 , pp. 127-136
    • Davis, J.L.1    Childers, L.D.2    Kuhn, N.D.3
  • 4
    • 0036286985 scopus 로고    scopus 로고
    • A molecular approach to biodiversity and biogeography in the planktonic foraminifer Globigerinella siphonifera (d'Orbigny)
    • De Vargas, C., Bonzon, M., Rees, N. W., Pawlowski, J. & Zaninetti, L. 2002. A molecular approach to biodiversity and biogeography in the planktonic foraminifer Globigerinella siphonifera (d'Orbigny). Mar. Micropaleontol., 45:101-116.
    • (2002) Mar. Micropaleontol. , vol.45 , pp. 101-116
    • De Vargas, C.1    Bonzon, M.2    Rees, N.W.3    Pawlowski, J.4    Zaninetti, L.5
  • 5
    • 0032904045 scopus 로고    scopus 로고
    • Clonal diversity in the rare Calamagrostis porteri ssp. insperata (Poaceae): Comparative results for allozymes and random amplified polymorphic DNA (RAPD) and intersimple sequence repeat (ISSR) markers
    • Esselman, E. J., Jianqiang, L., Crawford, D. J., Windus, J. L. & Wolfe, A. D. 1999. Clonal diversity in the rare Calamagrostis porteri ssp. insperata (Poaceae): comparative results for allozymes and random amplified polymorphic DNA (RAPD) and intersimple sequence repeat (ISSR) markers. Mol. Ecol., 8:443-451.
    • (1999) Mol. Ecol. , vol.8 , pp. 443-451
    • Esselman, E.J.1    Jianqiang, L.2    Crawford, D.J.3    Windus, J.L.4    Wolfe, A.D.5
  • 6
    • 33748585866 scopus 로고
    • Morphology and morphogenesis in Carchesium polypinum (Ciliophora: Peritrichida)
    • Esteban, G. & Fernández-Galiano, D. 1989. Morphology and morphogenesis in Carchesium polypinum (Ciliophora: Peritrichida). Trans. Am. Microsc. Soc., 108:345-353.
    • (1989) Trans. Am. Microsc. Soc. , vol.108 , pp. 345-353
    • Esteban, G.1    Fernández-Galiano, D.2
  • 7
    • 0026681074 scopus 로고
    • Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA restriction data
    • Excoffier, L., Smouse, P. E. & Quattro, J. M. 1992. Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics, 131:479-491.
    • (1992) Genetics , vol.131 , pp. 479-491
    • Excoffier, L.1    Smouse, P.E.2    Quattro, J.M.3
  • 8
    • 18444375606 scopus 로고    scopus 로고
    • Human-induced long-term changes in the lakes of the Jianghan Plain, Central Yangtze
    • Fang, J. Y., Rao, S. & Zhao, S. Q. 2005. Human-induced long-term changes in the lakes of the Jianghan Plain, Central Yangtze. Front. Ecol. Environ., 3:186-192.
    • (2005) Front. Ecol. Environ. , vol.3 , pp. 186-192
    • Fang, J.Y.1    Rao, S.2    Zhao, S.Q.3
  • 9
    • 0842302424 scopus 로고    scopus 로고
    • Is microbial diversity fundamentally different from biodiversity of larger animals and plants?
    • Fenchel, T. & Finlay, B. J. 2003. Is microbial diversity fundamentally different from biodiversity of larger animals and plants? Eur. J. Protistol., 39:486-490.
    • (2003) Eur. J. Protistol. , vol.39 , pp. 486-490
    • Fenchel, T.1    Finlay, B.J.2
  • 10
    • 0030755137 scopus 로고    scopus 로고
    • Local versus global diversity of microorganisms: Cryptic diversity of the ciliated protozoa
    • Fenchel, T., Esteban, G. F. & Finlay, B. J. 1997. Local versus global diversity of microorganisms: cryptic diversity of the ciliated protozoa. Oikos, 80:220-225.
    • (1997) Oikos , vol.80 , pp. 220-225
    • Fenchel, T.1    Esteban, G.F.2    Finlay, B.J.3
  • 11
    • 0037052531 scopus 로고    scopus 로고
    • Global dispersal of free-living microbial eukaryote species
    • Finlay, B. J. 2002. Global dispersal of free-living microbial eukaryote species. Science, 296:1061-1063.
    • (2002) Science , vol.296 , pp. 1061-1063
    • Finlay, B.J.1
  • 12
    • 0033607024 scopus 로고    scopus 로고
    • Ubiquitous dispersal of microbial species
    • Finlay, B. J. & Clarke, K. J. 1999. Ubiquitous dispersal of microbial species. Nature, 400:828.
    • (1999) Nature , vol.400 , pp. 828
    • Finlay, B.J.1    Clarke, K.J.2
  • 13
    • 0002480165 scopus 로고
    • Taxonomische und Ökologische Revision der Ciliaten des Saprobiensystems Band II: Peritrichida, Heterotrichida, Odontostomtida
    • München, Heflet
    • Foissner, W., Berger, H. & Kohmann, F. 1992. Taxonomische und Ökologische Revision der Ciliaten des Saprobiensystems Band II: Peritrichida, Heterotrichida, Odontostomtida. Information des Bayerischen Landesamtes für Wasserwirtschaft, München, Heflet 5/92:1-502.
    • (1992) Information des Bayerischen Landesamtes für Wasserwirtschaft , vol.5 , Issue.92 , pp. 1-502
    • Foissner, W.1    Berger, H.2    Kohmann, F.3
  • 14
    • 33748619947 scopus 로고    scopus 로고
    • Position and construction of preventing flood in Wuhan city
    • in Chinese
    • Fu, X. W. 2000. Position and construction of preventing flood in Wuhan city. Road, Bridge Prevent Flood City, 1:30-35. (in Chinese)
    • (2000) Road, Bridge Prevent Flood City , vol.1 , pp. 30-35
    • Fu, X.W.1
  • 15
    • 33748583112 scopus 로고    scopus 로고
    • Primary analyse of water resource, disasters and environment in the Changjiang River catchment
    • in Chinese
    • Jiang, J. H. & Wang, S. M. 2004. Primary analyse of water resource, disasters and environment in the Changjiang River catchment. Quat. Sci., 24:512-517. (in Chinese)
    • (2004) Quat. Sci. , vol.24 , pp. 512-517
    • Jiang, J.H.1    Wang, S.M.2
  • 16
  • 17
    • 0031926539 scopus 로고    scopus 로고
    • Local and temporal distribution of different genotypes of pond-dwelling Stentor coeruleus
    • Kusch, J. 1998. Local and temporal distribution of different genotypes of pond-dwelling Stentor coeruleus. Protist, 149:147-154.
    • (1998) Protist , vol.149 , pp. 147-154
    • Kusch, J.1
  • 18
    • 0030316930 scopus 로고    scopus 로고
    • Population structure of Euplotes ciliates revealed by RAPD fingerprinting
    • Kusch, J. & Heckmann, K. 1996. Population structure of Euplotes ciliates revealed by RAPD fingerprinting. Ecoscience, 3:378-384.
    • (1996) Ecoscience , vol.3 , pp. 378-384
    • Kusch, J.1    Heckmann, K.2
  • 19
    • 0034713644 scopus 로고    scopus 로고
    • Genetic diversity in populations of a freshwater ciliate
    • Kusch, J., Welter, H., Stremmel, M. & Schmidt, H. J. 2000. Genetic diversity in populations of a freshwater ciliate. Hydrobiologia, 431:185-192.
    • (2000) Hydrobiologia , vol.431 , pp. 185-192
    • Kusch, J.1    Welter, H.2    Stremmel, M.3    Schmidt, H.J.4
  • 20
    • 0010715440 scopus 로고
    • The interplay among ecology, breeding systems, and genetics in the Paramecium aurelia and Paramecium bursaria complexes
    • Landis, W. G. 1986. The interplay among ecology, breeding systems, and genetics in the Paramecium aurelia and Paramecium bursaria complexes. Prog. Protistol., 1:287-307.
    • (1986) Prog. Protistol. , vol.1 , pp. 287-307
    • Landis, W.G.1
  • 21
    • 0000244010 scopus 로고
    • The apportionment of human diversity
    • Lewontin, R. C. 1972. The apportionment of human diversity. Evol. Biol., 6:381-398.
    • (1972) Evol. Biol. , vol.6 , pp. 381-398
    • Lewontin, R.C.1
  • 23
    • 27744564412 scopus 로고    scopus 로고
    • There are high levels of functional and genetic diversity in Oxyrrhis marina
    • Lowe, C. D., Day, A., Kemp, S. J. & Montagnes, D. J. S. 2005. There are high levels of functional and genetic diversity in Oxyrrhis marina. J. Eukaryot. Microbiol., 52:250-257.
    • (2005) J. Eukaryot. Microbiol. , vol.52 , pp. 250-257
    • Lowe, C.D.1    Day, A.2    Kemp, S.J.3    Montagnes, D.J.S.4
  • 24
    • 0014054519 scopus 로고
    • The detection of disease clustering and a generalized regression approach
    • Mantel, N. 1967. The detection of disease clustering and a generalized regression approach. Cancer Res., 27:209-220.
    • (1967) Cancer Res. , vol.27 , pp. 209-220
    • Mantel, N.1
  • 28
    • 33645117088 scopus 로고    scopus 로고
    • Intraspecific phylogeography of Carchesium polypinum (Peritrichia, Ciliophora) from China, inferred from 18S-ITS1-5.8S ribosomal DNA
    • Miao, W., Yu, Y. H., Shen, Y. F. & Zhang, X. Y. 2004. Intraspecific phylogeography of Carchesium polypinum (Peritrichia, Ciliophora) from China, inferred from 18S-ITS1-5.8S ribosomal DNA. Sci. China Ser. C, 47:11-17.
    • (2004) Sci. China Ser. C , vol.47 , pp. 11-17
    • Miao, W.1    Yu, Y.H.2    Shen, Y.F.3    Zhang, X.Y.4
  • 29
    • 0033368136 scopus 로고    scopus 로고
    • Genetic relationship of 32 cell lines of the Euplotes octocarinatus species complex revealed by random amplified polymorphic DNA (RAPD) fingerprinting
    • Möllenbeck, M. 1999. Genetic relationship of 32 cell lines of the Euplotes octocarinatus species complex revealed by random amplified polymorphic DNA (RAPD) fingerprinting. Mol. Ecol., 8:1971-1979.
    • (1999) Mol. Ecol. , vol.8 , pp. 1971-1979
    • Möllenbeck, M.1
  • 30
    • 0030920044 scopus 로고    scopus 로고
    • Applicability of inter-simple sequence repeat polymorphisms in wheat for use as DNA markers in comparison to RFLP and RAPD markers
    • Nagaoka, T. & Ogihara, Y. 1997. Applicability of inter-simple sequence repeat polymorphisms in wheat for use as DNA markers in comparison to RFLP and RAPD markers. Theor. Appl. Genet., 94:597-602.
    • (1997) Theor. Appl. Genet. , vol.94 , pp. 597-602
    • Nagaoka, T.1    Ogihara, Y.2
  • 31
    • 0034868515 scopus 로고    scopus 로고
    • Comparison of multilocus RFLPs and PCR-based marker systems for genetic analysis of the silkworm, Bombyx mori
    • Nagaraju, J., Reddy, K. D., Nagaraja, G. M. & Sethuraman, B. N. 2001. Comparison of multilocus RFLPs and PCR-based marker systems for genetic analysis of the silkworm, Bombyx mori. Heredity, 86:588-597.
    • (2001) Heredity , vol.86 , pp. 588-597
    • Nagaraju, J.1    Reddy, K.D.2    Nagaraja, G.M.3    Sethuraman, B.N.4
  • 32
    • 0006919926 scopus 로고
    • Analysis of gene diversity in subdivided populations
    • Nei, M. 1973. Analysis of gene diversity in subdivided populations. Proc. Natl. Acad. Sci. USA, 70:3321-3323.
    • (1973) Proc. Natl. Acad. Sci. USA , vol.70 , pp. 3321-3323
    • Nei, M.1
  • 33
    • 0005814023 scopus 로고
    • Mathematical model for studying genetic variation in terms of restriction endonucleases
    • Nei, M. & Li, W. H. 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. USA, 76:5269-5273.
    • (1979) Proc. Natl. Acad. Sci. USA , vol.76 , pp. 5269-5273
    • Nei, M.1    Li, W.H.2
  • 34
    • 0030203863 scopus 로고    scopus 로고
    • TREEVIEW: An application to display phylogenetic trees on personal computers
    • Page, R. D. M. 1996. TREEVIEW: an application to display phylogenetic trees on personal computers. Comput. Appl. Biosci., 12:357-358.
    • (1996) Comput. Appl. Biosci. , vol.12 , pp. 357-358
    • Page, R.D.M.1
  • 35
    • 0031823046 scopus 로고    scopus 로고
    • What molecular markers can tell us about populations: Choosing and using a molecular marker
    • Parker, G. P., Snow, A. A., Schug, D. M., Booton, C. G. & Fuerst, A. P. 1998. What molecular markers can tell us about populations: choosing and using a molecular marker. Ecology, 79:361-382.
    • (1998) Ecology , vol.79 , pp. 361-382
    • Parker, G.P.1    Snow, A.A.2    Schug, D.M.3    Booton, C.G.4    Fuerst, A.P.5
  • 36
    • 0035092622 scopus 로고    scopus 로고
    • Genetic variation within and among populations of a wild rice Oryza granulata from China detected by RAPD and ISSR markers
    • Qian, W., Ge, S. & Hong, D. Y. 2001. Genetic variation within and among populations of a wild rice Oryza granulata from China detected by RAPD and ISSR markers. Theor. Appl. Genet., 102:440-449.
    • (2001) Theor. Appl. Genet. , vol.102 , pp. 440-449
    • Qian, W.1    Ge, S.2    Hong, D.Y.3
  • 37
    • 20444481378 scopus 로고    scopus 로고
    • Molecular screening of free-living microbial eukaryotes: Diversity and distribution using a meta-analysis
    • Richards, T. A. & Bass, D. 2005. Molecular screening of free-living microbial eukaryotes: diversity and distribution using a meta-analysis. Curr. Opin. Microbiol., 8:240-252.
    • (2005) Curr. Opin. Microbiol. , vol.8 , pp. 240-252
    • Richards, T.A.1    Bass, D.2
  • 38
    • 20444449887 scopus 로고    scopus 로고
    • The molecular diversity of freshwater picoeukaryotes from an oligotrophic lake reveals diverse, distinctive and globally dispersed lineages
    • Richards, T. A., Vepritskiy, A. A., Gouilamova, D. E. & Nierzwicki-Bauer, S. A. 2005. The molecular diversity of freshwater picoeukaryotes from an oligotrophic lake reveals diverse, distinctive and globally dispersed lineages. Environ. Microbiol., 7:1413-1425.
    • (2005) Environ. Microbiol. , vol.7 , pp. 1413-1425
    • Richards, T.A.1    Vepritskiy, A.A.2    Gouilamova, D.E.3    Nierzwicki-Bauer, S.A.4
  • 39
    • 0036895346 scopus 로고    scopus 로고
    • Variation among and within populations of the parasitic weed Orobanche crenata from Spain and Israel revealed by inter simple sequence repeat (ISSR) markers
    • Román, B., Satovic, Z., Rubiales, D., Torres, A. M., Cubero, J. I., Katzir, N. & Joel, D. M. 2002. Variation among and within populations of the parasitic weed Orobanche crenata from Spain and Israel revealed by inter simple sequence repeat (ISSR) markers. Phytopathology, 92:1262-1266.
    • (2002) Phytopathology , vol.92 , pp. 1262-1266
    • Román, B.1    Satovic, Z.2    Rubiales, D.3    Torres, A.M.4    Cubero, J.I.5    Katzir, N.6    Joel, D.M.7
  • 41
    • 11144339510 scopus 로고    scopus 로고
    • A comparative analysis of genetic diversity in blackgram genotypes using RAPD and ISSR markers
    • Souframanien, J. & Gopalakrishna, T. 2004. A comparative analysis of genetic diversity in blackgram genotypes using RAPD and ISSR markers. Theor. Appl. Genet., 109:1687-1693.
    • (2004) Theor. Appl. Genet. , vol.109 , pp. 1687-1693
    • Souframanien, J.1    Gopalakrishna, T.2
  • 42
    • 0002042136 scopus 로고    scopus 로고
    • A landscape approach to conservation genetics: Conserving evolutionary processes in the African Bovidae
    • Avise, J. C. & Hamrick, J. L. (ed.), Chapman & Hall, New York
    • Templeton, A. R. & Georgiadis, N. J. 1996. A landscape approach to conservation genetics: conserving evolutionary processes in the African Bovidae. In: Avise, J. C. & Hamrick, J. L. (ed.), Conservation Genetics: Case Histories. Chapman & Hall, New York. p. 398-430.
    • (1996) Conservation Genetics: Case Histories , pp. 398-430
    • Templeton, A.R.1    Georgiadis, N.J.2
  • 43
    • 0342636508 scopus 로고
    • Natural populations of Trypanosoma cruzi, the agent of Chagas disease, have a complex multiconal structure
    • Tibayrenc, M., Ward, P., Moya, A. & Ayala, F. J. 1986. Natural populations of Trypanosoma cruzi, the agent of Chagas disease, have a complex multiconal structure. Proc. Natl. Acad. Sci. USA, 83:115-119.
    • (1986) Proc. Natl. Acad. Sci. USA , vol.83 , pp. 115-119
    • Tibayrenc, M.1    Ward, P.2    Moya, A.3    Ayala, F.J.4
  • 44
    • 0007773398 scopus 로고    scopus 로고
    • Genetic diversity among natural stocks of Paramecium caudatum revealed by RAPD markers
    • Tsukii, Y. 1996. Genetic diversity among natural stocks of Paramecium caudatum revealed by RAPD markers. Eur. J. Protistol., 32(Suppl. I):165-169.
    • (1996) Eur. J. Protistol. , vol.32 , Issue.1 SUPPL. , pp. 165-169
    • Tsukii, Y.1
  • 45
    • 0032574846 scopus 로고    scopus 로고
    • Diploid hybrid speciation in Penstemon (Scrophulariaceae)
    • Wolfe, A. D., Xiang, Q. Y. & Kephart, S. R. 1998. Diploid hybrid speciation in Penstemon (Scrophulariaceae). Proc. Natl. Acad. Sci. USA, 95:5112-5115.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 5112-5115
    • Wolfe, A.D.1    Xiang, Q.Y.2    Kephart, S.R.3
  • 47
    • 3142631326 scopus 로고
    • Carchesium polypinum: Somatic and buccal structure analysis after protargol staining
    • Zagon, I. S. & Small, E. B. 1970. Carchesium polypinum: somatic and buccal structure analysis after protargol staining. Trans. Am. Microsc. Soc., 89:443-449.
    • (1970) Trans. Am. Microsc. Soc. , vol.89 , pp. 443-449
    • Zagon, I.S.1    Small, E.B.2
  • 49
    • 33748632300 scopus 로고    scopus 로고
    • Genetic relationships and phylogenetic characters of five peritrichous ciliates inferred from inter simple sequence repeat (ISSR) molecular markers
    • Zhang, W. J., Yu, Y. H. & Shen, Y. F. 2005a. Genetic relationships and phylogenetic characters of five peritrichous ciliates inferred from inter simple sequence repeat (ISSR) molecular markers. Acta Zootax. Sin., 30:659-665.
    • (2005) Acta Zootax. Sin. , vol.30 , pp. 659-665
    • Zhang, W.J.1    Yu, Y.H.2    Shen, Y.F.3
  • 50
    • 33748618078 scopus 로고    scopus 로고
    • Genetic relationships of five ciliates based on ISSR method
    • in Chinese
    • Zhang, W. J., Yu, Y. H. & Shen, Y. F. 2005b. Genetic relationships of five ciliates based on ISSR method. Acta Hydrobiol. Sin., 29:633-638. (in Chinese)
    • (2005) Acta Hydrobiol. Sin. , vol.29 , pp. 633-638
    • Zhang, W.J.1    Yu, Y.H.2    Shen, Y.F.3
  • 51
    • 0028316648 scopus 로고
    • Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification
    • Zietkiewicz, E., Rafalski, A. & Labuda, D. 1994. Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification. Genomics, 20:176-183.
    • (1994) Genomics , vol.20 , pp. 176-183
    • Zietkiewicz, E.1    Rafalski, A.2    Labuda, D.3


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