Lipomyces orientalis sp. nov., a yeast species isolated from soil in Vietnam

International Journal of Systematic and Evolutionary Microbiology

Volumn 56, Issue 8, 2006, Pages 2009-2013

  Thanh, Vu Nguyen ^a  

^a Food Industries Research Institute   (Viet Nam)

Author keywords

[No Author keywords available]

Indexed keywords

DNA 26S; FUNGAL DNA; NUCLEOTIDE;

ARTICLE; ASCOSPORE; CONTROLLED STUDY; FUNGAL GENE; FUNGAL GENETICS; FUNGAL STRAIN; FUNGUS; FUNGUS ISOLATION; GENE SEQUENCE; LIPOMYCES ORIENTALIS; LIPOMYCES TETRASPORUS; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; SOIL MICROFLORA; SPECIES DIFFERENCE; VIET NAM; YEAST;

DNA, RIBOSOMAL SPACER; MICROSCOPY, ELECTRON, SCANNING; MOLECULAR SEQUENCE DATA; RNA, FUNGAL; RNA, RIBOSOMAL; SOIL MICROBIOLOGY; SPORES, FUNGAL; VIETNAM; YEASTS;

LIPOMYCES; LIPOMYCES TETRASPORUS;

EID: 33747893029     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.64241-0     Document Type: Article

References (16)

1. Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402.
2. Babjeva, I. P. & Gorin, S. E. (1987). Soil Yeasts. Moscow: Moscow State University Press.
3. Esteve-Zarzoso, B., Belloch, C., Uruburu, F. & Querol, A. (1999). Identification of yeasts by RFLP analysis of the 5.8S rRNA gene and the two ribosomal internal transcribed spacers. Int J Syst Bacteriol 49, 329-337.
4. Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
5. Hall, T. A. (1999). BIOEDIT: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41, 95-98.
6. Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
7. Kurtzman, C. P. & Robnett, C. J. (1998). Identification and phylogeny of ascomycetous yeasts from analysis of nuclear large subunit (26S) ribosomal DNA partial sequences. Antonie van Leeuwenhoek 73, 331-371.
8. Nishimura, K., Shimada, K., Iwasawa, H., Naganuma, T. & Uzuka, Y. (2002). Total DNA preparation excluding extracellular acidic polysaccharide from Lipomyces yeasts and its application to taxonomic studies. Biosci Biotechnol Biochem 66, 1563-1566.
9. Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
10. Smith, M. Th. (1998). Lipomyces Lodder & Kreger van Rij. In The Yeasts, a Taxonomic study, 4th edn, pp. 248-253. Edited by C. P. Kurtzman & J. W. Fell. Amsterdam: Elsevier.
11. Thompson, J. D., Gibson, T. J., Plewniak F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
12. van der Walt, J. P. (1992). The Lipomycetaceae, a model family for phylogenetic studies. Antonie van Leeuwenhoek 62, 247-250.
13. van der Walt, J. P., Botha, A. & Smith, M. Th. (1997). Lipomyces mesembrius sp. nov., a member of the L. starkeyi species-complex. Antonie van Leeuwenhoek 71, 325-328.
14. van der Walt, J. P., Smith, M. Th. & Roeijmans, H. J. (1999). Four new species in Lipomyces. Syst Appl Microbiol 22, 229-236.
15. Yamada, Y. & Kondo, K. (1973). Coenzyme Q system in the classification of the yeast genera Rhodotorula and Cryptococcus, and the yeast-like genera Sporobolomyces and Rhodosporidium. J Gen Appl Microbiol 19, 59-77.
16. Yarrow, D. (1998). Methods for the isolation and identification of yeasts. In The Yeasts, a Taxonomic study, 4th edn, pp. 77-100. Edited by C. P. Kurtzman & J. W. Fell. Amsterdam: Elsevier.