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Volumn 34, Issue WEB. SERV. ISS., 2006, Pages

PAST: Fast structure-based searching in the PDB

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; POLYPEPTIDE; PROTEIN;

EID: 33747859069     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkl273     Document Type: Article
Times cited : (28)

References (13)
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    • Holm, L.1    Sander, C.2
  • 3
    • 0031715982 scopus 로고    scopus 로고
    • Protein structure alignment by incremental combinatorial extension (CE) of the optimal path
    • Shindyalov,I.N. and Bourne,P.E. (1998) Protein structure alignment by incremental combinatorial extension (CE) of the optimal path. Protein Eng., 11, 739-747.
    • (1998) Protein Eng. , vol.11 , pp. 739-747
    • Shindyalov, I.N.1    Bourne, P.E.2
  • 4
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    • Efficient recognition of folds in protein 3D structures by the improved PRIDE algorithm
    • Gáspári,Z., Vlahovicek,K. and Pongor,S. (2005) Efficient recognition of folds in protein 3D structures by the improved PRIDE algorithm. Bioinformatics, 21, 3322-3323.
    • (2005) Bioinformatics , vol.21 , pp. 3322-3323
    • Gáspári, Z.1    Vlahovicek, K.2    Pongor, S.3
  • 6
    • 0033613813 scopus 로고    scopus 로고
    • Recognition of spatial motifs in protein structures
    • Kleywegt,G.J. (1999) Recognition of spatial motifs in protein structures. J. Mol. Biol., 285, 1887-1897.
    • (1999) J. Mol. Biol. , vol.285 , pp. 1887-1897
    • Kleywegt, G.J.1
  • 7
    • 13444307044 scopus 로고    scopus 로고
    • Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions
    • Krissinel,E. and Henrick,K. (2004) Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions. Acta Crystallogr., D60, 2256-2268.
    • (2004) Acta Crystallogr. , vol.D60 , pp. 2256-2268
    • Krissinel, E.1    Henrick, K.2
  • 9
    • 24344476038 scopus 로고    scopus 로고
    • YAKUSA: A fast structural database scanning method
    • Carpentier,M., Brouillet,S. and Pothier,J. (2005) YAKUSA: a fast structural database scanning method. Proteins, 61, 137-151.
    • (2005) Proteins , vol.61 , pp. 137-151
    • Carpentier, M.1    Brouillet, S.2    Pothier, J.3
  • 10
    • 33749562079 scopus 로고    scopus 로고
    • A fast method for motif detection and searching in a protein structure database
    • Technical Report TUM-I0314 Inst. f. Informatik, TU München
    • Buchner,A. and Täubig,H. (2003) A fast method for motif detection and searching in a protein structure database. Technical Report TUM-I0314, Inst. f. Informatik, TU München.
    • (2003)
    • Buchner, A.1    Täubig, H.2
  • 11
    • 0001704377 scopus 로고
    • On-line construction of suffix trees
    • Ukkonen,E. (1995) On-line construction of suffix trees. Algorithmica, 14, 249-260.
    • (1995) Algorithmica , vol.14 , pp. 249-260
    • Ukkonen, E.1
  • 13
    • 85134561091 scopus 로고    scopus 로고
    • A method for fast approximate searching of polypeptide structures in the PDB
    • In of Lecture Notes in Informatics, Köllen Verlag
    • Täubig,H., Buchner,A. and Griebsch,J. (2004) A method for fast approximate searching of polypeptide structures in the PDB. In Proceedings of the German Conference on Bioinformatics (GCB'04), Vol. P-53 of Lecture Notes in Informatics, Köllen Verlag, pp. 65-74.
    • (2004) Proceedings of the German Conference on Bioinformatics (GCB'04) , vol.P-53 , pp. 65-74
    • Täubig, H.1    Buchner, A.2    Griebsch, J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.