메뉴 건너뛰기




Volumn 34, Issue WEB. SERV. ISS., 2006, Pages

TICO: A tool for postprocessing the predictions of prokaryotic translation initiation sites

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARTICLE; COMPUTER INTERFACE; COMPUTER PROGRAM; GENOME; INTERNET; PREDICTION; PRIORITY JOURNAL; PROKARYOTE; TRANSLATION INITIATION; BACTERIAL GENOME; COMPUTER GRAPHICS; GENOMICS; METABOLISM; METHODOLOGY; PROKARYOTIC CELL; RNA TRANSLATION;

EID: 33747843703     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkl313     Document Type: Article
Times cited : (8)

References (12)
  • 1
    • 0346849666 scopus 로고    scopus 로고
    • GS-Finder: A program to find bacterial gene start sites with a self-training method
    • Ou,H.-Y., Guo,F.-B. and Zhang,C.-T. (2004) GS-Finder: a program to find bacterial gene start sites with a self-training method. Int. J. Biochem. Cell Biol., 36, 535-544.
    • (2004) Int. J. Biochem. Cell Biol. , vol.36 , pp. 535-544
    • Ou, H.-Y.1    Guo, F.-B.2    Zhang, C.-T.3
  • 2
    • 12344296536 scopus 로고    scopus 로고
    • Accuracy improvement for identifying translation initiation sites in microbial genomes
    • Zhu,H.-Q., Hu,G.-Q., Ouyang,Z.-Q., Wang,J. and She,Z.-S. (2004) Accuracy improvement for identifying translation initiation sites in microbial genomes. Bioinformatics, 20, 3308-3317.
    • (2004) Bioinformatics , vol.20 , pp. 3308-3317
    • Zhu, H.-Q.1    Hu, G.-Q.2    Ouyang, Z.-Q.3    Wang, J.4    She, Z.-S.5
  • 3
    • 0842303618 scopus 로고    scopus 로고
    • YACOP: Enhanced gene prediction obtained by a combination of existing methods
    • Tech,M. and Merkl,R. (2003) YACOP: enhanced gene prediction obtained by a combination of existing methods. In Silico Biol., 3, 441-451.
    • (2003) In Silico Biol. , vol.3 , pp. 441-451
    • Tech, M.1    Merkl, R.2
  • 4
    • 0036137327 scopus 로고    scopus 로고
    • A probabilistic method for identifying start codons in bacterial genomes
    • Suzek,B.E., Ermolaeva,M.D., Schreiber,M. and Salzberg,S.L. (2001) A probabilistic method for identifying start codons in bacterial genomes. Bioinformatics, 17, 1123-1130.
    • (2001) Bioinformatics , vol.17 , pp. 1123-1130
    • Suzek, B.E.1    Ermolaeva, M.D.2    Schreiber, M.3    Salzberg, S.L.4
  • 5
    • 0037444091 scopus 로고    scopus 로고
    • ZCurve: A new system for recognizing protein-coding genes in bacterial and archaeal genomes
    • Guo,F.-B., Ou,H.-Y. and Zhang,C.-T. (2003) ZCurve: a new system for recognizing protein-coding genes in bacterial and archaeal genomes. Nucleic Acides Res., 31, 1780-1789.
    • (2003) Nucleic Acides Res. , vol.31 , pp. 1780-1789
    • Guo, F.-B.1    Ou, H.-Y.2    Zhang, C.-T.3
  • 6
    • 0016154301 scopus 로고
    • The 30 terminal sequence of Escherichia coli 16S ribosomal RNA: Complementary to nonsense triplets and ribosome binding sites
    • Shine,J. and Dalgarno,L. (1974) The 30 terminal sequence of Escherichia coli 16S ribosomal RNA: complementary to nonsense triplets and ribosome binding sites. Proc. Natl Acad. Sci. USA, 71, 1342-1346.
    • (1974) Proc. Natl Acad. Sci. USA , vol.71 , pp. 1342-1346
    • Shine, J.1    Dalgarno, L.2
  • 7
    • 33645635990 scopus 로고    scopus 로고
    • An unsupervised classification scheme for improving predictions of prokaryotic TIS
    • Tech,M. and Meinicke,P. (2006) An unsupervised classification scheme for improving predictions of prokaryotic TIS. BMC Bioinformatics, 7, 121.
    • (2006) BMC Bioinformatics , vol.7 , pp. 121
    • Tech, M.1    Meinicke, P.2
  • 9
    • 24144441274 scopus 로고    scopus 로고
    • TICO: A tool for improving predictions of prokaryotic translation initiation sites
    • Tech,M., Pfeifer,N., Morgenstern,B. and Meinicke,P. (2005) TICO: a tool for improving predictions of prokaryotic translation initiation sites. Bioinformatics, 21, 3568-3569.
    • (2005) Bioinformatics , vol.21 , pp. 3568-3569
    • Tech, M.1    Pfeifer, N.2    Morgenstern, B.3    Meinicke, P.4
  • 11
    • 0034949816 scopus 로고    scopus 로고
    • Codon and base biases after the initiation codon of the open reading frames in the Escherichia coli genome and their influence on the translation efficiency
    • Sato,T., Terabe,M., Watanabe,H., Gojobori,T., Hori-Takemoto,C. and Miura,K. (2001) Codon and base biases after the initiation codon of the open reading frames in the Escherichia coli genome and their influence on the translation efficiency. J. Biochem., 129, 851-860.
    • (2001) J. Biochem. , vol.129 , pp. 851-860
    • Sato, T.1    Terabe, M.2    Watanabe, H.3    Gojobori, T.4    Hori-Takemoto, C.5    Miura, K.6
  • 12
    • 13244260800 scopus 로고    scopus 로고
    • Oligo kernels for datamining on biological sequences: A case study on prokaryotic translation initiation sites
    • Meinicke,P., Tech,M., Morgenstern,B. and Merkl,R. (2004) Oligo kernels for datamining on biological sequences: a case study on prokaryotic translation initiation sites. BMC Bioinformatics, 5, 169.
    • (2004) BMC Bioinformatics , vol.5 , pp. 169
    • Meinicke, P.1    Tech, M.2    Morgenstern, B.3    Merkl, R.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.