Stress-specific role of fission yeast Gcn5 histone acetyltransferase in programming a subset of stress response genes

Eukaryotic Cell

Volumn 5, Issue 8, 2006, Pages 1337-1346

  Johnsson, Anna ^a,b   Xue Franzén, Yongtao ^a   Lundin, Maria ^a   Wright, Anthony P H ^a  

^a KAROLINSKA INSTITUTE   (Sweden)

^b School of Life Sciences Södertörn University   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

ACYLTRANSFERASE; CALCIUM CHLORIDE; GCN5 PROTEIN, S POMBE; POTASSIUM CHLORIDE; SCHIZOSACCHAROMYCES POMBE PROTEIN;

ADAPTATION; ARTICLE; CELL PROLIFERATION; DRUG EFFECT; GENE EXPRESSION REGULATION; GENETICS; METABOLISM; OSMOTIC PRESSURE; PHYSIOLOGY; SCHIZOSACCHAROMYCES; TRANSCRIPTION INITIATION;

ACETYLTRANSFERASES; ADAPTATION, PHYSIOLOGICAL; CALCIUM CHLORIDE; CELL PROLIFERATION; GENE EXPRESSION REGULATION, FUNGAL; OSMOTIC PRESSURE; POTASSIUM CHLORIDE; SCHIZOSACCHAROMYCES; SCHIZOSACCHAROMYCES POMBE PROTEINS; TRANSCRIPTIONAL ACTIVATION;

SACCHAROMYCES CEREVISIAE; SACCHAROMYCETALES; SCHIZOSACCHAROMYCES POMBE;

EID: 33747361359     PISSN: 15359778     EISSN: None     Source Type: Journal    
DOI: 10.1128/EC.00101-06     Document Type: Article

References (33)

1. Bahler, J., J. Q. Wu, M. S. Longtine, N. G. Shah, A. McKenzie III, A. B. Steever, A. Wach, P. Philippsen, and J. R. Pringle. 1998. Heterologous modules for efficient and versatile PCR-based gene targeting in Schizosaccharomyces pombe. Yeast 14:943-951.
2. Berger, S. L., B. Pina, N. Silverman, G. A. Marcus, J. Agapite, J. L. Regier, S. J. Triezenberg, and L. Guarente. 1992. Genetic isolation of ADA2: a potential transcriptional adaptor required for function of certain acidic activation domains. Cell 70:251-265.
3. Bhaumik, S. R., T. Raha, D. P. Aiello, and M. R. Green. 2004. In vivo target of a transcriptional activator revealed by fluorescence resonance energy transfer. Genes Dev. 18:333-343.
4. Brownell, J. E., J. Zhou, T. Ranalli, R. Kobayashi, D. G. Edmondson, S. Y. Roth, and C. D. Allis. 1996. Tetrahymena histone acetyltransferase A: a homolog to yeast Gcn5p linking histone acetylation to gene activation. Cell 84:843-851.
5. Calero, F., and J. Ramos. 2003. K+ fluxes in Schizosaccharomyces pombe. FEMS Yeast Res. 4:1-6.
6. Chen, D., W. M. Toone, J. Mata, R. Lyne, G. Burns, K. Kivinen, A. Brazma, N. Jones, and J. Bahler. 2003. Global transcriptional responses of fission yeast to environmental stress. Mol. Biol. Cell 14:214-229.
7. Dunand-Sauthier, I., C. A. Walker, J. Narasimhan, A. K. Pearce, R. C. Wek, and T. C. Humphrey. 2005. Stress-activated protein kinase pathway functions to support protein synthesis and translational adaptation in response to environmental stress in fission yeast. Eukaryot. Cell 4:1785-1793.
8. Ekwall, K. 2005. Genome-wide analysis of HDAC function. Trends Genet. 21:608-615.
9. Facanha, A. L., H. Appelgren, M. Tabish, L. Okorokov, and K. Ekwall. 2002. The endoplasmic reticulum cation P-type ATPase Cta4p is required for control of cell shape and microtubule dynamics. J. Cell Biol. 157:1029-1039.
10. Fagerstrom-Billai, F., and A. P. Wright. 2005. Functional comparison of the Tup11 and Tup12 transcriptional corepressors in fission yeast. Mol. Cell. Biol. 25:716-727.
11. Ferreira, M. E., S. Hermann, P. Prochasson, J. L. Workman, K. D. Berndt, and A. P. Wright. 2005. Mechanism of transcription factor recruitment by acidic activators. J. Biol. Chem. 280:21779-21784.
12. Grant, P. A., L. Duggan, J. Cote, S. M. Roberts, J. E. Brownell, R. Candau, R. Ohba, T. Owen-Hughes, C. D. Allis, F. Winston, S. L. Berger, and J. L. Workman. 1997. Yeast Gcn5 functions in two multisubunit complexes to acetylate nucleosomal histones: characterization of an Ada complex and the SAGA (Spt/Ada) complex. Genes Dev. 11:1640-1650.
13. Grant, P. A., A. Eberharter, S. John, R. G. Cook, B. M. Turner, and J. L. Workman. 1999. Expanded lysine acetylation specificity of Gcn5 in native complexes. J. Biol. Chem. 274:5895-5900.
14. Greenall, A., A. P. Hadcroft, P. Malakasi, N. Jones, B. A. Morgan, C. S. Hoffman, and S. K. Whitehall. 2002. Role of fission yeast Tup1-like repressors and Prr1 transcription factor in response to salt stress. Mol. Biol. Cell 13:2977-2989.
15. Hahn, S., S. Buratowski, P. A. Sharp, and L. Guarente. 1989. Yeast TATA-binding protein TFIID binds to TATA elements with both consensus and nonconsensus DNA sequences. Proc. Natl. Acad. Sci. USA 86:5718-5722.
16. Hermann, S., K. D. Berndt, and A. P. Wright. 2001. How transcriptional activators bind target proteins. J. Biol. Chem. 276:40127-40132.
17. Hertel, C. B., G. Langst, W. Horz, and P. Korber. 2005. Nucleosome stability at the yeast PHO5 and PHO8 promoters correlates with differential cofactor requirements for chromatin opening. Mol. Cell. Biol. 25:10755-10767.
18. Hirota, K., T. Hasemi, T. Yamada, K. I. Mizuno, C. S. Hoffman, T. Shibata, and K. Ohta. 2004. Fission yeast global repressors regulate the specificity of chromatin alteration in response to distinct environmental stresses. Nucleic Acids Res. 32:855-862.
19. Hirota, K., C. S. Hoffman, T. Shibata, and K. Ohta. 2003. Fission yeast Tup1-like repressors repress chromatin remodeling at the fbp1+ promoter and the ade6-M26 recombination hotspot. Genetics 165:505-515.
20. Huisinga, K. L., and B. F. Pugh. 2004. A genome-wide housekeeping role for TFIID and a highly regulated stress-related role for SAGA in Saccharomyces cerevisiae. Mol. Cell 13:573-585.
21. Kuo, M. H., J. E. Brownell, R. E. Sobel, T. A. Ranalli, R. G. Cook, D. G. Edmondson, S. Y. Roth, and C. D. Allis. 1996. Transcription-linked acetylation by Gcn5p of histones H3 and H4 at specific lysines. Nature 383:269-272.
22. Lee, T. I., H. C. Causton, F. C. Holstege, W. C. Shen, N. Hannett, E. G. Jennings, F. Winston, M. R. Green, and R. A. Young. 2000. Redundant roles for the TFIID and SAGA complexes in global transcription. Nature 405:701-704.
23. Li, Y., P. M. Flanagan, H. Tschochner, and R. D. Kornberg. 1994. RNA polymerase II initiation factor interactions and transcription start site selection. Science 263:805-807.
24. Martinez-Campa, C., P. Politis, J. L. Moreau, N. Kent, J. Goodall, J. Mellor, and C. R. Goding. 2004. Precise nucleosome positioning and the TATA box dictate requirements for the histone H4 tail and the bromodomain factor Bdf1. Mol. Cell 15:69-81.
25. Millar, J. B., V. Buck, and M. G. Wilkinson. 1995. Pyp1 and Pyp2 PTPases dephosphorylate an osmosensing MAP kinase controlling cell size at division in fission yeast. Genes Dev. 9:2117-2130.
26. Papamichos-Chronakis, M., T. Petrakis, E. Ktistaki, I. Topalidou, and D. Tzamarias. 2002. Cti6, a PHD domain protein, bridges the Cyc8-Tup1 corepressor and the SAGA coactivator to overcome repression at GAL1. Mol. Cell 9:1297-1305.
27. Robert, F., D. K. Pokholok, N. M. Hannett, N. J. Rinaldi, M. Chandy, A. Rolfe, J. L. Workman, D. K. Gifford, and R. A. Young. 2004. Global position and recruitment of HATs and HDACs in the yeast genome. Mol. Cell 16:199-209.
28. Sterner, D. E., P. A. Grant, S. M. Roberts, L. J. Duggan, R. Belotserkovskaya, L. A. Pacella, F. Winston, J. L. Workman, and S. L. Berger. 1999. Functional organization of the yeast SAGA complex: distinct components involved in structural integrity, nucleosome acetylation, and TATA-binding protein interaction. Mol. Cell. Biol. 19:86-98.
29. Utley, R. T., K. Ikeda, P. A. Grant, J. Cote, D. J. Steger, A. Eberharter, S. John, and J. L. Workman. 1998. Transcriptional activators direct histone acetyltransferase complexes to nucleosomes. Nature 394:498-502.
30. Wallberg, A. E., K. E. Neely, J. A. Gustafsson, J. L. Workman, A. P. Wright, and P. A. Grant. 1999. Histone acetyltransferase complexes can mediate transcriptional activation by the major glucocorticoid receptor activation domain. Mol. Cell. Biol. 19:5952-5959.
31. Xue, Y., S. A. Haas, L. Brino, A. Gusnanto, M. Reimers, D. Talibi, M. Vingron, K. Ekwall, and A. P. Wright. 2004. A DNA microarray for fission yeast: minimal changes in global gene expression after temperature shift. Yeast 21:25-39.
32. Yamada, T., K. I. Mizuno, K. Hirota, N. Kon, W. P. Wahls, E. Hartsuiker, H. Murofushi, T. Shibata, and K. Ohta. 2004. Roles of histone acetylation and chromatin remodeling factor in a meiotic recombination hotspot. EMBO J. 23:1792-1803.
33. Yang, W. M., W. Gahl, and D. Hamer. 1991. Role of heat shock transcription factor in yeast metallothionein gene expression. Mol. Cell. Biol. 11:3676-3681.