Characterization of Streptomyces MITKK-103, a newly isolated actinomycin X2-producer

Applied Microbiology and Biotechnology

Volumn 72, Issue 1, 2006, Pages 145-154

  Kurosawa, K ^a   Bui, V P ^a   VanEssendelft, J L ^a   Willis, L B ^a   Lessard, P A ^a   Ghiviriga, I ^b   Sambandan, T G ^a   Rha, C K ^a   Sinskey, A J ^a  

^a MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

^b University of Florida   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

HUMIC ACID AGAR MEDIUM; NONOPTIMIZED GROWING; STREPTOMYCES GALBUS; STREPTOMYCES GRISEOFUSCUS;

ANTIBIOTICS; CYTOLOGY; DISEASE CONTROL; DNA; NANOTECHNOLOGY; OPTIMIZATION; SOILS; TOXICITY;

BACTERIA;

ACTINOMYCIN DERIVATIVE; ACTINOMYCIN X2; ACTINOMYCIN XOBETA; AGAR; AMPICILLIN; BACTERIAL DNA; CHLORAMPHENICOL DERIVATIVE; DACTINOMYCIN; DNA 16S; GENOMIC DNA; GENTAMICIN; HUMIC ACID; KANAMYCIN; NEOMYCIN; NOVOBIOCIN; RIFAMPICIN; SODIUM; SPECTINOMYCIN; STREPTOMYCIN SULFATE; TETRACYCLINE; UNCLASSIFIED DRUG; VANCOMYCIN;

AGAR; APOPTOSIS; BACTERIUM; DNA; HUMIC ACID; MORPHOLOGY; PHENOTYPE; PHYLOGENETICS; SOIL MICROORGANISM;

ANTIBIOTIC RESISTANCE; APOPTOSIS; ARTICLE; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIUM CULTURE; CANCER CELL CULTURE; CELL DEATH; CELL STRAIN HL 60; CULTURE MEDIUM; DNA DETERMINATION; DNA SEQUENCE; DRUG CYTOTOXICITY; DRUG STRUCTURE; DRUG SYNTHESIS; GENOTYPE; GENUS; HUMAN; HUMAN CELL; HUMIC ACID AGAR MEDIUM; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PHYLOGENETIC TREE; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; SOIL; SPECIES DIFFERENTIATION; SPECIES IDENTIFICATION; STREPTOMYCES; STREPTOMYCES GALBUS; STREPTOMYCES GRISEOFUSCUS; STREPTOMYCES PADANUS;

BACTERIAL TYPING TECHNIQUES; DACTINOMYCIN; DNA, BACTERIAL; DNA, RIBOSOMAL; HL-60 CELLS; HUMANS; MICROSCOPY, ELECTRON, SCANNING; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PHYLOGENY; PIGMENTS, BIOLOGICAL; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID; SOIL MICROBIOLOGY; STREPTOMYCES;

STREPTOMYCES; STREPTOMYCES GALBUS; STREPTOMYCES GRISEOFUSCUS; STREPTOMYCES PADANUS;

EID: 33747197276     PISSN: 01757598     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00253-005-0240-2     Document Type: Article

References (47)

1. Alekhova TA, Novozhilova T (2001) Biosynthesis of polyketide antibiotics by various actinomycin producing Streptomyces species. Prikl Biokhim Mikrobiol 37:309-316
2. Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25:3389-3402
3. Anderson AS, Wellington EM (2001) The taxonomy of Streptomyces and related genera. Int J Syst Evol Microbiol 51:797-814
4. Baldacci E, Farina G, Piacenza E, Fabbri G (1968) Description of Streptomyces padanus sp. nov. and emendation of Streptomyces xantophaeus. G Microbiol 16:9-16
5. Bolognese A, Correale G, Manfra M, Lavecchia A, Mazzoni O, Novellino E, Barone V, Pani A, Tramontano E, La Colla P, Murgioni C, Serra I, Setzu G, Loddo R (2002) Antitumor agents. 1. Synthesis, biological evaluation, and molecular modeling of 5H-pyrido[3,2-a]phenoxazin-5-one, a compound with potent antiproliferative activity. J Med Chem 45:5205-5216
6. Bossi R, Hutter R, Keller-Schierlein W, Neipp L, Zahner H (1958) Metabolic products from actinomycetes. XIV. Actinomycin Z. Helv Chim Acta 41:1645-1652
7. Brosius J, Palmer ML, Kennedy PJ, Noller HF (1978) Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli. Proc Natl Acad Sci U S A 75:4801-4805
8. Castillo UF, Strobel GA, Ford EJ, Hess WM, Porter H, Jensen JB, Albert H, Robison R, Condron MA, Teplow DB, Stevens D, Yaver D (2002) Munumbicins, wide-spectrum antibiotics produced by Streptomyces NRRL 30562, endophytic on Kennedia nigriscans. Microbiology 148:2675-2685
9. Chen FM, Sha F, Chin KH, Chou SH (2004) The nature of actinomycin D binding to d(AACCAXYG) sequence motifs. Nucleic Acids Res 32:271-277
10. El-Gammal AA (1987) Characterization of an orange-brown pigment-antibiotic produced by Streptomyces viridiviolaceus. Egypt J Microbiol 21:37-42
11. El-Naggar MYM (1998) Synergistic effect of actinomycin X2 produced by Streptomyces nasri YG62 with other antibiotics. Biomed Lett 58:169-173
12. Ezaki T, Hashimoto Y, Yabuuchi E (1989) Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39:224-229
13. Farber S, D'Angio G, Evans A, Mitus A (2002) Clinical studies of actinomycin D with special reference to Wilms' tumor in children. 1960. J Urol 168:2560-2562; discussion 2563
14. Frommer W (1959) Zur Systematik der actinomycin bildenden streptomyceten. Arch Mikrobiol 32:187-206
15. Green DM (1997) Paediatric oncology update/Wilms' tumour. Eur J Cancer 33:409-418
16. Guo J, Wu T, Bess J, Henderson LE, Levin JG (1998) Actinomycin D inhibits human immunodeficiency virus type 1 minus-strand transfer in in vitro and endogenous reverse transcriptase assays. J Virol 72:6716-6724
17. Gupta KC, Sobti RR, Chopra IC (1963) Actinomycin produced by a new species of Streptomyces. Hindustan Antibiot Bull 6:12-16
18. Ha SC, Hong SD (1994) Identification of the actinomycete strain No.1372, a producer of actinomycin X2. Sanop Misaengmul Hakhoechi 22:164-168
19. Hirata Y, Nakanishi K (1949) Actinomycin J2, a by-product from a strain of Actinomyces. Bull Chem Soc Jpn 22:121-127
20. Jacobson E, Dstwald W (1942) The color harmony manual and how to use it. Color Laboratories Division, Chicago
21. Kataoka M, Ueda K, Kudo T, Seki T, Yoshida T (1997) Application of the variable region in 16S rDNA to create an index for rapid species identification in the genus Streptomyces. FEMS Microbiol Lett 151:249-255
22. Kleeff J, Kornmann M, Sawhney H, Korc M (2000) Actinomycin D induces apoptosis and inhibits growth of pancreatic cancer cells. Int J Cancer 86:399-407
23. Kurzatkowski W (1975) Role of Streptomyces melanochromogenes cell wall and membrane in actinomycin D biosynthesis. Med Dosw Mikrobiol 27:325-336
24. Lam KS, Gustavson DR, Pirnik DL, Pack E, Bulanhagui C, Mamber SW, Forenza S, Stodieck LS, Klaus DM (2002) The effect of space flight on the production of actinomycin D by Streptomyces plicatus. J Ind Microbiol Biotechnol 29:299-302
25. Malpartida F, Hallam SE, Kieser HM, Motamedi H, Hutchinson CR, Butler MJ, Sugden DA, Warren M, McKillop C, Bailey CR et al (1987) Homology between Streptomyces genes coding for synthesis of different polyketides used to clone antibiotic biosynthetic genes. Nature 325:818-821
26. Marmur J (1961) A procedure for the isolation of deoxyribonucleic acid from micro-organisms. J Mol Biol 3:208-218
27. Marroquin AS (1959) Actinomycin A from Streptomyces globosus. Rev Soc Quim Mex 3:19-22
28. Mauger AB (1980) The actinomycins. Ellis Horwood, England
29. Men'shikov GP, Denisova SI (1962) Isolation of actinomycins from the group Actinomyces fluorescens. Antibiotiki 7:31-32
30. Mossman T (1983) Rapid colorimetric assay for cellular growth and survival: application to proliferation and cytotoxicity assays. J Immunol Methods 65:55-63
31. Onaka H, Taniguchi S, Igarashi Y, Furumai T (2002) Cloning of the staurosporine biosynthetic gene cluster from Streptomyces sp. TP-A0274 and its heterologous expression in Streptomyces lividans. J Antibiot (Tokyo) 55:1063-1071
32. Pernodet JL, Boccard F, Alegre MT, Gagnat J, Guerineau M (1989) Organization and nucleotide sequence analysis of a ribosomal RNA gene cluster from Streptomyces ambofaciens. Gene 79:33-46
33. Pirt SJ, Pickett SMA, Pickett AM, Vandamme EJ, Bird CW (1981) Antibiotics from the newly isolated Streptomyces elizabethii. J Chem Technol Biotech 167-177:167-177
34. Rill RL, Hecker KH (1996) Sequence-specific actinomycin D binding to single-stranded DNA inhibits HIV reverse transcriptase and other polymerases. Biochemistry 35:3525-3533
35. Roos GHP, Loane C (2004) A clarifying NMR study of actinomycin X2. J Saudi Chem Soc 8:289-294
36. Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425
37. Shih HD, Liu YC, Hsu FL, Mulabagal V, Dodda R, Huang JW (2003) Fungichromin: a substance from Streptomyces padanus with inhibitory effects on Rhizoctonia solani. J Agric Food Chem 51:95-99
38. Shirling EB, Gottlieb D (1966) Methods for characterization of Streptomyces species. Int J Syst Bacteriol 16:313-340
39. Shirling EB, Gottlieb D (1968) Cooperative description of type cultures of Streptomyces. III. Additional species descriptions from first and second studies. Int J Syst Bacteriol 18:279-392
40. Takusagawa F, Carlson RG, Weaver RF (2001) Anti-leukemia selectivity in actinomycin analogues. Bioorg Med Chem 9:719-725
41. Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673-4680
42. Wadkins RM, Vladu B, Tung CS (1998) Actinomycin D binds to metastable hairpins in single-stranded DNA. Biochemistry 37:11915-11923
43. Waksman SA, Woodruff HB (1940) Bacteriostatic and bacteriocidal substances produced by soil actinomycetes. Proc Soc Exp Biol Med 45:609-614
44. Wayne LG, Brenner DJ, Colwell RR, Grimont PAD, Kandler O, Krichevsky MI, Moore LH, Moore WEC, Murray RGE, Stackebrandt E, Starr MP, Trüper HG (1987) Report of the Ad Hoc Committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37:463-464
45. Williams WK, Katz E (1977) Development of a chemically defined medium for the synthesis of actinomycin D by Streptomyces parvulus. Antimicrob Agents Chemother 11:281-290
46. Womer RB (1997) Soft tissue sarcomas. Eur J Cancer 33:2230-2234; discussion 2234-2236
47. Zhou C, Wu Y, Dong L, Ye H, Wu J (1999) Studies on the mutation and fermentation of Hainanmycin producing strain. Zhongguo Kangshengsu Zazhi 24:11-13