Amine free crystal structure: The crystal structure of d(CGCGCG)2 and methylamine complex crystal

Biochemical and Biophysical Research Communications

Volumn 348, Issue 3, 2006, Pages 794-798

  Ohishi, Hirofumi ^a   Tsukamoto, Koji ^b   Hiyama, Yoichi ^c   Maezaki, Naoyoshi ^b   Tanaka, Tetsuaki ^b   Ishida, Toshimasa ^a  

^a OSAKA MEDICAL COLLEGE   (Japan)

^b OSAKA UNIVERSITY   (Japan)

^c DAINIPPON SUMITOMO PHARMA CO LTD   (Japan)

Author keywords

Crystal structure; Methylamine; X ray crystallography; Z DNA

Indexed keywords

DNA; MAGNESIUM; METHYLAMINE;

ARTICLE; CRYSTAL STRUCTURE; CRYSTALLIZATION; DNA CONFORMATION; DNA STRUCTURE; MOLECULAR STABILITY; PRIORITY JOURNAL; STRUCTURE ANALYSIS; SYNCHROTRON RADIATION; X RAY CRYSTALLOGRAPHY;

CRYSTALLOGRAPHY, X-RAY; DNA, Z-FORM; METHYLAMINES; OLIGODEOXYRIBONUCLEOTIDES;

EID: 33747193862     PISSN: 0006291X     EISSN: 10902104     Source Type: Journal    
DOI: 10.1016/j.bbrc.2006.06.192     Document Type: Article

References (24)

1. Hatake T. Neutron and X-ray crystallographic analysis of DNA oligomers. Hydrogen and hydration in DNA molecules. Nippon Kessho Gakkaishi 47 3 (2005) 189-196
2. Saminathan M., Thomas T., Shirahata A., Pillai C.K.S., and Thomas T.J. Polyamine structural effects on the induction and stabilization of liquid crystalline DNA: potential applications to DNA packaging, gene therapy and polyamine therapeutics. Nucleic Acids Research 30 17 (2002) 3722-3731
3. Davidson K., Petit T., Izbicka E., Koester S., and Von Hoff D.D. Mitoguazone induces apoptosis via a p53-independent mechanism. Anti-Cancer Drugs 9 7 (1998) 635-640
4. Abascal J.L.F., and Montoro J.C.G. The role of the molecular shape on the conformational transition from B- to Z-DNA. Journal of Chemical Physics 110 (1999) 11094-11095
5. Ohishi H., Nakanishi I., and Tomita K. Comparison of a left-handed Z-DNA molecular structure determined by X-rays with that simulated by a molecular dynamics. Biochemical and Biophysical Research Communications 236 (1997) 146-150
6. Williams D., Bancroft L.D., Rich A., and Egli M. The low-temperature crystal structure of the pure-spermine form of Z-DNA reveals binding of a spermine molecule in the minor groove. Biochemistry 33 (1994) 1073-1086
7. 2, hexamer at room temperature. FEBS Letters 523 1-3 (2002) 29-34
8. Conner B.N., Takano T., Tanaka S., Itakura K., and Dickerson R.E. The molecular structure of $D(*CP*CP*GP*G), fragment of right-handed double helical A-/DNA$. Nature 295 (1982) 294
9. Drew H.R., and Dickerson R.E. Structure of a B-DNA dodecamer III geometry of hydration. Journal of Molecular Biology 151 (1981) 535-556
10. Wang A.H., Quigley G.J., Kolpak F.J., Crawford J.L., van Boom J.H., van der Marel G., and Rich A. Molecular structure of a left-handed double helical DNA fragment at atomic resolution. Nature 282 (1979) 680-686
11. Hu X., Sharlene W., Michael F., and Manni A. Interaction between polyamines and the mitogen-activated protein kinase pathway in the regulation of cell cycle variables in breast cancer cells. Cancer Research 65 23 (2005) 11026-11033
12. Marverti, Gaetano M., MariaGiuseppina P., Anthony E.M., B Diane E., Saverio L., Alessio C., Andrea D., Domenico M., and Maria S. Spermidine/spermine N1-acetyltransferase transient overexpression restores sensitivity of resistant human ovarian cancer cells to N1, N12-bis(ethyl)spermine and to cisplatin. Carcinogenesis 26 10 (2005) 1677-1686
13. Peulen O., and Dandrifosse G. Spermine-induced maturation in wistar rat intestine: A cytokine-dependent mechanism. Journal of Pediatric Gastroenterology and Nutrition 38 5 (2004) 524-532
14. Ohishi H., Nakanishi I., Inubushi K., van der Marel G., van Boom J.H., Rich A., Wang A.H.J., Hakoshima T., and Tomita K. FEBS Letters 391 1,2 (1996) 153-156
15. 3 and N-(2-aminoethyl)-1,4-diamino-butane complex. FEBS Letters 284 (1991) 238-244
16. Egli M., Williams L.D., Gao Q., and Rich A. Structure of the pure-spermine form of Z-DNA (magnesium free) at 1-.ANG. resolution. Biochemistry 30 48 (1991) 11388-11402
17. 3 and thermospermine complex. FEBS Letters 398 23 (1996) 291-296
18. Leslie A.G.W. The integration of macromolecular diffraction data. Acta Crystallographica. Section D, Biological Crystallography D62 1 (2006) 48-57
19. M.D. Winn, A.W. Ashton, P.J. Briggs, C.C. Ballard, High-throughput structure determination, in: Proceedings of the 2002 CCP4 (Collaborative Computational Project in Macromolecular Crystallography) Study Weekend, January 2002, York, United Kingdom, Acta Crystallographica. Section D, Biological Crystallography, 2002, pp. 1897-1970.
20. Kikuchi A., and Shiro N. Crystal structure of rat biliverdin reductase and use in drug screening and drug design. Japan Kokai Tokkyo Koho (2002) 72
21. G.M. Sheldrick, Z. Dauter, K.S. Wilson, H. Hope, L.C. Sieke, The application of direct methods and Patterson interpretation to high-resolution native protein data, Acta Crystallographica. Section D, Biological Crystallography (1993) 18-23.
22. J. Badger, R.A. Kumer, P. Yip, S. Szalma, New features and enhancements in the X-PLOR computer program, Proteins 35 (1999) 25-33.
23. Ng S.W. Some strategies for the refinement of disordered structures with the SHELXL-97 refinement program. Jiegou Huaxue 24 12 (2005) 1425-1439
24. Herbert A., and Rich A. Left-handed Z-DNA: structure and function. Genetica 106 (1999) 37-47