Parapatric distribution of the lizards Plestiodon (formerly Eumeces) latiscutatus and P. japonicus (Reptilia: Scincidae) around the Izu Peninsula, central Japan, and its biogeographic implications

Zoological Science

Volumn 23, Issue 5, 2006, Pages 419-425

  Okamoto, Taku ^a   Motokawa, Junko ^a   Toda, Mamoru ^a   Hikida, Tsutomu ^a  

^a KYOTO UNIVERSITY   (Japan)

Author keywords

Izu Peninsula; Mitochondrial DNA; Parapatry; Plestiodon japonicus; Plestiodon latiscutatus; Secondary contact

Indexed keywords

MITOCHONDRIAL DNA; RIBOSOME DNA; RNA 16S;

ANIMAL; ANIMAL DISEASE; ARTICLE; CHEMISTRY; CLASSIFICATION; CONSENSUS SEQUENCE; ECOSYSTEM; GENETIC VARIABILITY; GENETICS; GEOGRAPHY; HAPLOTYPE; JAPAN; LIZARD; MOLECULAR EVOLUTION; PHYLOGENY; POPULATION GENETICS; SEQUENCE ALIGNMENT; SPECIES DIFFERENCE; STATISTICAL MODEL; TIME;

ANIMALS; CONSENSUS SEQUENCE; DNA, MITOCHONDRIAL; DNA, RIBOSOMAL; ECOSYSTEM; EVOLUTION, MOLECULAR; GENETICS, POPULATION; GEOGRAPHY; HAPLOTYPES; JAPAN; LIKELIHOOD FUNCTIONS; LIZARDS; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEQUENCE ALIGNMENT; SPECIES SPECIFICITY; TIME FACTORS; VARIATION (GENETICS);

EUMECES; REPTILIA; SCINCIDAE; SQUAMATA;

EID: 33746633927     PISSN: 02890003     EISSN: 02890003     Source Type: Journal    
DOI: 10.2108/zsj.23.419     Document Type: Article

References (50)

1. Akaike H (1974) A new look at the statistical model identification. IEEE Trans Autom Contr 19: 716-723
2. Avise JC (2000) Phylogeography: The History and Formation of Species. Harverd University Press, Cambridge, Massachusetts
3. Barton NH, Hewitt GM (1985) Analysis of hybrid zones. Annu Rev Ecol Syst 16: 113-148
4. Brandley MC, Schmitz A, Reeder TW (2005) Partitioned Bayesian analyses, partition choice, and the phylogenetic relationships of scincid lizards. Syst Biol 54: 373-390
5. Cannone JJ, Subramanian S, Schnare MN, Collett JR, D'Souza LM, Du Y, Feng B, Lin N, Madabusi LV, Müller KM, Pande N, Shang Z, Yu N, Gutell RR (2002) The Comparative RNA Web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs. BMC Bioinformatics 3: 2
6. Endler JA (1977) Geographic Variation, Speciation, and Clines. Monographs in Population Biology. Princeton University Press, Princeton
7. Felsenstein J (1981) Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17: 368-376
8. Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791
9. Ferris SD, Sage RD, Huang CM, Nielsen JT, Ritte U, Wilson AC (1983) Flow of mitochondrial DNA across a species boundary. Proc Natl Acad Sci USA 80: 2290-2294
10. Griffith H, Ngo A, Murphy RW (2000) A cladistic evaluation of the cosmopolitan genus Eumeces Wiegmann (Reptilia, Squamata, Scincidae). Russ J Herpetol 7: 1-16
11. Habe T (1977) Land molluscan fauna of the Izu Islands and its biogeographical significance. Mem Natl Sci Mus 10: 77-82 (in Japanese with English abstract)
12. Hallowell E (1861) [1860] Report upon the Reptilia of the North Pacific exploring expedition, under command of Capt. John Roger. Proc Acad Nat Sci Phil 1860: 480-510
13. Hayashi M, Chiba S (2000) Intraspecific diversity of mitochondrial DNA in the land snail Euhadra peliomphala (Bradybaenidae). Biol J Linn Soc 70: 391-401
14. Hayashi M, Chiba S (2004) Enhanced colour polymorphisms in island populations of the land snail Euhadra peliomphala. Biol J Linn Soc 81: 417-425
15. Hedges SB, Nussbaum RA, Maxson LR (1993) Caecilian phylogeny and biogeography inferred from mitochondrial DNA sequences of the 12S rRNA and 16S rRNA genes (Amphibia: Gymnophiona). Herpetol Monogr 7: 64-76
16. Hikida T (1993) Phylogenetic relationships of the skinks of the genus Eumeces (Scincidae: Reptilia) from East Asia. Jpn J Herpetol 15: 1-21
17. Hikida T (1996) Scincidae. In "The Encyclopedia of Animals in Japan 5, Amphibians, Reptiles, Chondrichthyes" Ed by S Sengoku, T Hikida, M Matsui, K Nakaya, Heibonsha, Tokyo, pp 80-82 (in Japanese)
18. Honda M, Ota H, Kobayashi M, Nabhitabhata J, Yong HS, Hikida T (1999) Phylogenetic relationships of the flying lizards genus Draco (Reptilia, Agamidae). Zool Sci 16: 535-549
19. Imanaga I (1999) Stratigraphy and tectonics of the Ashigara group in Izu collision zone, central Japan. Bull Kanagawa Pref Mus Nat Sci 28: 73-106
20. Itani Y (1999) Molecular phylogeography of the genus Ligia in Japanese islands. Konchu to Shizen 34 (2): 39-41 (in Japanese)
21. Itani Y (2000) Phylogeography of Japanese Ligia species (Isopoda: Crustacea) based on molecular phylogenetic analysis. Ph. D. thesis, Graduate School of Science, Kyoto University
22. Jobb G (2004) TREEFINDER version March 2004. Munich, Germany. Distributed by the author at www.treefinder.de
23. Kato J, Ota H, Hikida T (1994) Biochemical systematics of the latiscutatus species-group of the genus Eumeces (Scincidae: Reptilia) from East Asian islands. Biochem Syst Ecol 22: 491-500
24. Kimura T (1985) The Japanese Islands -The History of Formation Vol III, Kokon Shoin, Tokyo (in Japanese)
25. Kitazato H (1997) Paleogeographic changes in central Honshu, Japan, during the late Cenozoic in relation to the collision of the Izu-Ogasawara Arc with the Honshu Arc. Isl Arc 6: 144-157
26. Kocher TD, Thomas WK, Meyer A, Edwards SV, Pääbo S, Villablanca FX, Wilson AC (1989) Dynamics of mitochondrial DNA evolution in animals: amplifications and sequencing with conserved primers. Proc Natl Acad Sci USA 86: 6196-6200
27. Kumazawa Y, Nishida M (1999) Complete mitochondrial DNA sequences of the green turtle and blue-tailed mole skink: statistical evidence for archosaurian affinity of turtles. Mol Biol Evol 16:784-792
28. MacCallum CJ, Nürberger B, Barton NH (1995) Experimental evidence for habitat dependent selection in Bombina hybrid zone. Proc R Soc Lond Ser B Biol Sci 260: 257-264
29. McMillan WO, Jiggins CD, Mallent J (1997) What initiates speciation in passion-vine butterflies? Proc Natl Acad Sci USA 94: 8628-8633
30. Motokawa J, Hikida T (2003) Genetic variation and differentiation in the Japanese five-lined skink, Eumeces latiscutatus (Reptile: Squamata). Zool Sci 20: 97-106
31. Nakamura K, Uéno SI (1963) Japanese Reptiles and Amphibians in Color. Hoikusha, Osaka, Japan (in Japanese)
32. Nishikawa K, Matsui M, Tanabe S (2005) Biochemical phylogenetics and historical biogeography of Hynobius boulengeri and H. stejnegeri (Amphibia: Caudata) from the Kyushu region, Japan. Herpetologica 61:54-62
33. Nishikawa K, Matsui M, Tanabe S, Sato S (2001) Geographic enzyme variation in a Japanese salamander, Hynobius boulengeri Thompson (Amphibia: Caudata). Herpetologica 57: 281-294
34. Peters WCH (1864) Über die Eidechsenfamilie der Scincoiden, insbesondere über die Schneider'schen, Wiegmann'schen, und neue Arten des zoologischen Museums. Mber Königl Akad Wiss Berlin 1864 (Januar): 44-58
35. Posada D, Crandall KA (1998) MODELTEST: testing the model of DNA substitution. Bioinformatics 14: 817-818
36. Schmitz A, Mausfeld P, Embert D (2004) Molecular studies on the genus Eumeces Wiegmann, 1834: phylogenetic relationships and taxonomic implications. Hamadryad 28: 73-89
37. Shimizu Y, Ueshima R (2000) Historical biogeography and interspecific mtDNA introgression in Euhadra peliomphala (the Japanese land snail). Heredity 85: 84-96
38. Smith HM (2005) Plestiodon: a replacement name for most members of the genus Eumeces in North America. J Kansas Herpetol 14: 15-16
39. Stejneger L (1907) Herpetology of Japan and adjacent territory. Bull US Natl Mus 58: l-xx+1-577
40. Su ZH, Tominaga O, Okamoto M, Osawa S (1998) Origin and diversification of hindwingless Damaster ground beetles within the Japanese islands ans deduced from mitochondrial ND5 Gene Sequences (Coleoptera, Carabidae). Mol Biol Evol 15: 1026-1039
41. Sugimura A (1972) Plate boundaries in and near Japan. Kagaku 42(4): 192-202 (in Japanese)
42. Takahashi M, Saito K (1997) Miocene intra-arc bending at an arc-arc collision zone, central Japan. Isl Arc 6: 168-182
43. Takahata N, Slatkin M (1984) Mitochondrial gene flow. Proc Natl Acad Sci USA 81: 1764-1767
44. Taylor E (1936) [1935] A taxonomic study of the cosmopolitan sincoid lizards of the genus Eumeces with an account of the distribution and relationships of its species. Kansas Univ Sci Bull 23: 1-643
45. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 24: 4876-4882
46. Toda M, Hikida T, Ota H (2001a) Discovery of sympatric cryptic species within Gekko hokouensis (Gekkonidae: Squamata) from the Okinawa Islands, Japan, by use of allozyme data. Zool Scr 30: 1-11
47. Toda M, Okada S, Ota H, Hikida T (2001b) Biochemical assessment of evolution and taxonomy of the morphologically poorly diverged geckos, Gekko yakuensis and G. hokouensis (Reptilia: Squamata) in Japan, with special reference to their occasional hybridization. Biol J Linn Soc 73: 153-165
48. Tominaga A, Matsui M, Nishikawa K, Sato S (2003) Occurrence of two types of Hynobius naevius in Northern Kyushu, Japan (Amphibia: Urodela). Zool Sci 20: 1467-1476
49. Wada H, Makabe KW, Nakauchi M, Satoh N (1992) Phylogenetic relationships between solitary and colonial ascidians, as inferred from the sequence of the central region of their respective 18S rDNA. Biol Bull 183: 448-455
50. Watanabe Y, Chiba S (2001) High within-population mitochondrial DNA variation due to microvicariance and population mixing in the land snail Euhadra quaesti (Pulmonata: Bradybaenidae). Mol Ecol 10: 2635-2645