-
1
-
-
0033552961
-
Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori
-
Alm, R. A., L. S. Ling, D. T. Moir, B. L. King, E. D. Brown, P. C. Doig, D. R. Smith, B. Noonan, B. C. Guild, B. L. dejonge, G. Carmel, P. J. Tummino, A. Caruso, M. Uria-Nickelsen, D. M. Mills, C. Ives, R. Gibson, D. Merberg, S. D. Mills, Q. Jiang, D. E. Taylor, G. F. Vovis, and T. J. Trust. 1999. Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori. Nature 397:176-180.
-
(1999)
Nature
, vol.397
, pp. 176-180
-
-
Alm, R.A.1
Ling, L.S.2
Moir, D.T.3
King, B.L.4
Brown, E.D.5
Doig, P.C.6
Smith, D.R.7
Noonan, B.8
Guild, B.C.9
Dejonge, B.L.10
Carmel, G.11
Tummino, P.J.12
Caruso, A.13
Uria-Nickelsen, M.14
Mills, D.M.15
Ives, C.16
Gibson, R.17
Merberg, D.18
Mills, S.D.19
Jiang, Q.20
Taylor, D.E.21
Vovis, G.F.22
Trust, T.J.23
more..
-
2
-
-
0035117352
-
Acid-induced gene expression in Helicobacter pylori: Study in genomic scale by microarray
-
Ang, S., C. Z. Lee, K. Peck, M. Sindici, U. Matrubutham, M. A. Gleeson, and J. T. Wang. 2001. Acid-induced gene expression in Helicobacter pylori: study in genomic scale by microarray. Infect. Immun. 69:1679-1686.
-
(2001)
Infect. Immun.
, vol.69
, pp. 1679-1686
-
-
Ang, S.1
Lee, C.Z.2
Peck, K.3
Sindici, M.4
Matrubutham, U.5
Gleeson, M.A.6
Wang, J.T.7
-
3
-
-
2042475439
-
Structural basis for transcription regulation by alarmone ppGpp
-
Artsimovitch, I., V. Patlan, S. Sekine, M. N. Vassylyeva, T. Hosaka, K. Ochi, S. Yokohama, and D. G. Vassylyev. 2004. Structural basis for transcription regulation by alarmone ppGpp. Cell 117:299-310.
-
(2004)
Cell
, vol.117
, pp. 299-310
-
-
Artsimovitch, I.1
Patlan, V.2
Sekine, S.3
Vassylyeva, M.N.4
Hosaka, T.5
Ochi, K.6
Yokohama, S.7
Vassylyev, D.G.8
-
4
-
-
33645084521
-
Multiple phases of competence occur during the Helicobacter pylori growth cycle
-
Baltrus, D. A., and K. Guillemin. 2006. Multiple phases of competence occur during the Helicobacter pylori growth cycle. FEMS Microbiol. Lett. 255:148-155.
-
(2006)
FEMS Microbiol. Lett.
, vol.255
, pp. 148-155
-
-
Baltrus, D.A.1
Guillemin, K.2
-
5
-
-
85047691456
-
Helicobacter pylori persistence: Biology and disease
-
Blaser, M. J., and J. C. Atherton. 2004. Helicobacter pylori persistence: biology and disease. J. Clin. Investig. 113:321-333.
-
(2004)
J. Clin. Investig.
, vol.113
, pp. 321-333
-
-
Blaser, M.J.1
Atherton, J.C.2
-
6
-
-
33646353669
-
The Helicobacter pylori cag pathogenicity island protein CagN is a bacterial membrane-associated protein that is processed at its C terminus
-
Bourzac, K. M., L. A. Satkamp, and K. Guillemin. 2006. The Helicobacter pylori cag pathogenicity island protein CagN is a bacterial membrane-associated protein that is processed at its C terminus. Infect. Immun. 74:2537-2543.
-
(2006)
Infect. Immun.
, vol.74
, pp. 2537-2543
-
-
Bourzac, K.M.1
Satkamp, L.A.2
Guillemin, K.3
-
7
-
-
30344476728
-
New horizons for (p)ppGpp in bacterial and plant physiology
-
Braeken, K., M. Moris, R. Daniels, J. Vanderleyden, and J. Michiels. 2006. New horizons for (p)ppGpp in bacterial and plant physiology. Trends Microbiol. 14:45-54.
-
(2006)
Trends Microbiol.
, vol.14
, pp. 45-54
-
-
Braeken, K.1
Moris, M.2
Daniels, R.3
Vanderleyden, J.4
Michiels, J.5
-
8
-
-
7044233697
-
Lack of stage-specific proteins in coccoid Helicobacter pylori cells
-
Bumann, D., H. Habibi, B. Kan, M. Schmid, C. Goosmann, V. Brinkmann, T. F. Meyer, and P. R. Jungblut. 2004. Lack of stage-specific proteins in coccoid Helicobacter pylori cells. Infect. Immun. 72:6738-6742.
-
(2004)
Infect. Immun.
, vol.72
, pp. 6738-6742
-
-
Bumann, D.1
Habibi, H.2
Kan, B.3
Schmid, M.4
Goosmann, C.5
Brinkmann, V.6
Meyer, T.F.7
Jungblut, P.R.8
-
9
-
-
3242881125
-
Responsiveness to acidity via metal ion regulators mediates virulence in the gastric pathogen Helicobacter pylori
-
Bury-Mone, S., J. M. Thiberge, M. Contreras, A. Maitournam, A. Labigne, and H. De Reuse. 2004. Responsiveness to acidity via metal ion regulators mediates virulence in the gastric pathogen Helicobacter pylori. Mol. Microbiol. 53:623-638.
-
(2004)
Mol. Microbiol.
, vol.53
, pp. 623-638
-
-
Bury-Mone, S.1
Thiberge, J.M.2
Contreras, M.3
Maitournam, A.4
Labigne, A.5
De Reuse, H.6
-
10
-
-
0003174053
-
The stringent response
-
F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.). ASM Press, Washington, D.C.
-
Cashel, M., D. R. Gentry, V. J. Hernandez, and D. Vinella. 1996. The stringent response, p. 1458-1496. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella: cellular and molecular biology, 2nd ed. ASM Press, Washington, D.C.
-
(1996)
Escherichia Coli and Salmonella: Cellular and Molecular Biology, 2nd Ed.
, pp. 1458-1496
-
-
Cashel, M.1
Gentry, D.R.2
Hernandez, V.J.3
Vinella, D.4
-
11
-
-
0027173990
-
Molecular characterization of the 128-kDa immunodominant antigen of Helicobacter pylori associated with cytotoxicity and duodenal ulcer
-
Covacci, A., S. Censini, M. Bugnoli, R. Petracca, D. Burroni, G. Macchia, A. Massone, E. Papini, Z. Xiang, N. Figura, et al. 1993. Molecular characterization of the 128-kDa immunodominant antigen of Helicobacter pylori associated with cytotoxicity and duodenal ulcer. Proc. Natl. Acad. Sci. USA 90:5791-5795.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 5791-5795
-
-
Covacci, A.1
Censini, S.2
Bugnoli, M.3
Petracca, R.4
Burroni, D.5
Macchia, G.6
Massone, A.7
Papini, E.8
Xiang, Z.9
Figura, N.10
-
12
-
-
0017597146
-
A new technique for selection of sensitive and auxotrophic mutants of Escherichia coli: Isolation of a strain sensitive to an excess of one-carbon metabolites
-
Danchin, A. 1977. A new technique for selection of sensitive and auxotrophic mutants of Escherichia coli: isolation of a strain sensitive to an excess of one-carbon metabolites. Mol. Gen. Genet. 150:293-299.
-
(1977)
Mol. Gen. Genet.
, vol.150
, pp. 293-299
-
-
Danchin, A.1
-
13
-
-
29644439241
-
Iron and pH homeostasis intersect at the level of fur regulation in the gastric pathogen Helicobacter pylori
-
Gancz, H., S. Censini, and D. S. Merrell. 2006. Iron and pH homeostasis intersect at the level of Fur regulation in the gastric pathogen Helicobacter pylori. Infect. Immun. 74:602-614.
-
(2006)
Infect. Immun.
, vol.74
, pp. 602-614
-
-
Gancz, H.1
Censini, S.2
Merrell, D.S.3
-
14
-
-
16244417460
-
The Campylobacter jejuni stringent response controls specific stress survival and virulence-associated phenotypes
-
Gaynor, E. C., D. H. Wells, J. K. MacKichan, and S. Falkow. 2005. The Campylobacter jejuni stringent response controls specific stress survival and virulence-associated phenotypes. Mol. Microbiol. 56:8-27.
-
(2005)
Mol. Microbiol.
, vol.56
, pp. 8-27
-
-
Gaynor, E.C.1
Wells, D.H.2
MacKichan, J.K.3
Falkow, S.4
-
15
-
-
0030931386
-
Coccoid forms of Helicobacter pylori are the morphologic manifestation of cell death
-
Kusters, J. G., M. M. Gerrits, J. A. Van Strijp, and C. M. Vandenbroucke-Grauls. 1997. Coccoid forms of Helicobacter pylori are the morphologic manifestation of cell death. Infect. Immun. 65:3672-3679.
-
(1997)
Infect. Immun.
, vol.65
, pp. 3672-3679
-
-
Kusters, J.G.1
Gerrits, M.M.2
Van Strijp, J.A.3
Vandenbroucke-Grauls, C.M.4
-
16
-
-
0033955874
-
Emergency derepression: Stringency allows RNA polymerase to override negative control by an active repressor
-
Kvint, K., C. Hosbond, A. Farewell, O. Nybroe, and T. Nystrom. 2000. Emergency derepression: stringency allows RNA polymerase to override negative control by an active repressor. Mol. Microbiol. 35:435-443.
-
(2000)
Mol. Microbiol.
, vol.35
, pp. 435-443
-
-
Kvint, K.1
Hosbond, C.2
Farewell, A.3
Nybroe, O.4
Nystrom, T.5
-
18
-
-
0347622751
-
Null mutation of HvrA compensates for loss of an essential relA/spoT-like gene in Rhodobacter capsulatus
-
Masuda, S., and C. E. Bauer. 2004. Null mutation of HvrA compensates for loss of an essential relA/spoT-like gene in Rhodobacter capsulatus. J. Bacteriol. 186:235-239.
-
(2004)
J. Bacteriol.
, vol.186
, pp. 235-239
-
-
Masuda, S.1
Bauer, C.E.2
-
19
-
-
4344592305
-
Helicobacter pylori antibiotic resistance: Prevalence, importance, and advances in testing
-
Megraud, F. 2004. Helicobacter pylori antibiotic resistance: prevalence, importance, and advances in testing. Gut 53:1374-1384.
-
(2004)
Gut
, vol.53
, pp. 1374-1384
-
-
Megraud, F.1
-
20
-
-
0027244956
-
Nonpolar mutagenesis of the ipa genes defines IpaB, IpaC, and IpaD as effectors of Shigella flexneri entry into epithelial cells
-
Menard, R., P. J. Sansonetti, and C. Parsot. 1993. Nonpolar mutagenesis of the ipa genes defines IpaB, IpaC, and IpaD as effectors of Shigella flexneri entry into epithelial cells. J. Bacteriol. 175:5899-5906.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 5899-5906
-
-
Menard, R.1
Sansonetti, P.J.2
Parsot, C.3
-
21
-
-
17344383530
-
Environmental regulation of exopolysaccharide production in Sinorhizobium meliloti
-
Mendrygal, K. E., and J. E. Gonzalez. 2000. Environmental regulation of exopolysaccharide production in Sinorhizobium meliloti. J. Bacteriol. 182:599-606.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 599-606
-
-
Mendrygal, K.E.1
Gonzalez, J.E.2
-
22
-
-
0038781648
-
pH-regulated gene expression of the gastric pathogen Helicobacter pylori
-
Merrell, D. S., M. L. Goodrich, G. Otto, L. S. Tompkins, and S. Falkow. 2003. pH-regulated gene expression of the gastric pathogen Helicobacter pylori. Infect. Immun. 71:3529-3539.
-
(2003)
Infect. Immun.
, vol.71
, pp. 3529-3539
-
-
Merrell, D.S.1
Goodrich, M.L.2
Otto, G.3
Tompkins, L.S.4
Falkow, S.5
-
23
-
-
0034866076
-
Comparative genomics and evolution of genes encoding bacterial (p)ppGpp synthetases/hydrolases (the Rel, RelA and SpoT proteins)
-
Mittenhuber, G. 2001. Comparative genomics and evolution of genes encoding bacterial (p)ppGpp synthetases/hydrolases (the Rel, RelA and SpoT proteins). J. Mol. Microbiol. Biotechnol. 3:585-600.
-
(2001)
J. Mol. Microbiol. Biotechnol.
, vol.3
, pp. 585-600
-
-
Mittenhuber, G.1
-
24
-
-
0036135877
-
Effect of cold starvation, acid stress, and nutrients on metabolic activity of Helicobacter pylori
-
Nilsson, H. O., J. Blom, W. Abu-Al-Soud, A. A. Ljungh, L. P. Andersen, and T. Wadstrom. 2002. Effect of cold starvation, acid stress, and nutrients on metabolic activity of Helicobacter pylori. Appl. Environ. Microbiol. 68:11-19.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 11-19
-
-
Nilsson, H.O.1
Blom, J.2
Abu-Al-Soud, W.3
Ljungh, A.A.4
Andersen, L.P.5
Wadstrom, T.6
-
25
-
-
25444522923
-
Acid-induced activation of the urease promoters is mediated directly by the ArsRS two-component system of Helicobacter pylori
-
Pflock, M., S. Kennard, I. Delany, V. Scarlato, and D. Beier. 2005. Acid-induced activation of the urease promoters is mediated directly by the ArsRS two-component system of Helicobacter pylori. Infect. Immun. 73:6437-6445.
-
(2005)
Infect. Immun.
, vol.73
, pp. 6437-6445
-
-
Pflock, M.1
Kennard, S.2
Delany, I.3
Scarlato, V.4
Beier, D.5
-
26
-
-
0017617943
-
Studies on the control of development: Isolation of Bacillus subtilis mutants blocked early in sporulation and defective in synthesis of highly phosphorylated nucleotides
-
Rhaese, H. J., J. A. Hoch, and R. Groscurth. 1977. Studies on the control of development: isolation of Bacillus subtilis mutants blocked early in sporulation and defective in synthesis of highly phosphorylated nucleotides. Proc. Natl. Acad. Sci. USA 74:1125-1129.
-
(1977)
Proc. Natl. Acad. Sci. USA
, vol.74
, pp. 1125-1129
-
-
Rhaese, H.J.1
Hoch, J.A.2
Groscurth, R.3
-
27
-
-
0038718459
-
The gastric biology of Helicobacter pylori
-
Sachs, G., D. L. Weeks, K. Melchers, and D. R. Scott. 2003. The gastric biology of Helicobacter pylori. Annu. Rev. Physiol. 65:349-369.
-
(2003)
Annu. Rev. Physiol.
, vol.65
, pp. 349-369
-
-
Sachs, G.1
Weeks, D.L.2
Melchers, K.3
Scott, D.R.4
-
28
-
-
9244239747
-
Global transposon mutagenesis and essential gene analysis of Helicobacter pylori
-
Salama, N. R., B. Shepherd, and S. Falkow. 2004. Global transposon mutagenesis and essential gene analysis of Helicobacter pylori. J. Bacteriol. 186:7926-7935.
-
(2004)
J. Bacteriol.
, vol.186
, pp. 7926-7935
-
-
Salama, N.R.1
Shepherd, B.2
Falkow, S.3
-
29
-
-
0034970345
-
Regulation of transcription in Helicobacter pylori: Simple systems or complex circuits?
-
Scarlato, V., I. Delany, G. Spohn, and D. Beier. 2001. Regulation of transcription in Helicobacter pylori: simple systems or complex circuits? Int. J. Med. Microbiol. 291:107-117.
-
(2001)
Int. J. Med. Microbiol.
, vol.291
, pp. 107-117
-
-
Scarlato, V.1
Delany, I.2
Spohn, G.3
Beier, D.4
-
30
-
-
0032921887
-
Helicobacter pylori: A eubacterium lacking the stringent response
-
Scoarughi, G. L., C. Cimmino, and P. Donini. 1999. Helicobacter pylori: a eubacterium lacking the stringent response. J. Bacteriol. 181:552-555.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 552-555
-
-
Scoarughi, G.L.1
Cimmino, C.2
Donini, P.3
-
31
-
-
0033944885
-
comH, a novel gene essential for natural transformation of Helicobacter pylori
-
Smeets, L. C., J. J. Bijlsma, S. Y. Boomkens, C. M. Vandenbroucke-Grauls, and J. G. Kusters. 2000. comH, a novel gene essential for natural transformation of Helicobacter pylori. J. Bacteriol. 182:3948-3954.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 3948-3954
-
-
Smeets, L.C.1
Bijlsma, J.J.2
Boomkens, S.Y.3
Vandenbroucke-Grauls, C.M.4
Kusters, J.G.5
-
32
-
-
0030835739
-
The complete genome sequence of the gastric pathogen Helicobacter pylori
-
Tomb, J. F., O. White, A. R. Kerlavage, R. A. Clayton, G. G. Sutton, R. D. Fleischmann, K. A. Ketchum, H. P. Klenk, S. Gill, B. A. Dougherty, K. Nelson, J. Quackenbush, L. Zhou, E. F. Kirkness, S. Peterson, B. Loftus, D. Richardson, R. Dodson, H. G. Khalak, A. Glodek, K. McKenney, L. M. Fitzegerald, N. Lee, M. D. Adams, E. K. Hickey, D. E. Berg, J. D. Gocayne, T. R. Utterback, J. D. Peterson, J. M. Kelley, M. D. Cotton, J. M. Weidman, C. Fujii, C. Bowman, L. Watthey, E. Wallin, W. S. Hayes, M. Borodovsky, P. D. Karp, H. O. Smith, C. M. Fraser, and J. C. Venter. 1997. The complete genome sequence of the gastric pathogen Helicobacter pylori. Nature 388:539-547.
-
(1997)
Nature
, vol.388
, pp. 539-547
-
-
Tomb, J.F.1
White, O.2
Kerlavage, A.R.3
Clayton, R.A.4
Sutton, G.G.5
Fleischmann, R.D.6
Ketchum, K.A.7
Klenk, H.P.8
Gill, S.9
Dougherty, B.A.10
Nelson, K.11
Quackenbush, J.12
Zhou, L.13
Kirkness, E.F.14
Peterson, S.15
Loftus, B.16
Richardson, D.17
Dodson, R.18
Khalak, H.G.19
Glodek, A.20
McKenney, K.21
Fitzegerald, L.M.22
Lee, N.23
Adams, M.D.24
Hickey, E.K.25
Berg, D.E.26
Gocayne, J.D.27
Utterback, T.R.28
Peterson, J.D.29
Kelley, J.M.30
Cotton, M.D.31
Weidman, J.M.32
Fujii, C.33
Bowman, C.34
Watthey, L.35
Wallin, E.36
Hayes, W.S.37
Borodovsky, M.38
Karp, P.D.39
Smith, H.O.40
Fraser, C.M.41
Venter, J.C.42
more..
-
33
-
-
5644252852
-
NikR-mediated regulation of Helicobacter pylori acid adaptation
-
van Vliet, A. H., F. D. Ernst, and J. G. Kusters. 2004. NikR-mediated regulation of Helicobacter pylori acid adaptation. Trends Microbiol. 12:489-494.
-
(2004)
Trends Microbiol.
, vol.12
, pp. 489-494
-
-
Van Vliet, A.H.1
Ernst, F.D.2
Kusters, J.G.3
-
34
-
-
33646540388
-
Helicobacter pylori initiates the stringent response upon nutrient and pH downshift
-
Wells, D. H., and E. C. Gaynor. 2006. Helicobacter pylori initiates the stringent response upon nutrient and pH downshift. J. Bacteriol. 188:3726-3729.
-
(2006)
J. Bacteriol.
, vol.188
, pp. 3726-3729
-
-
Wells, D.H.1
Gaynor, E.C.2
-
35
-
-
0036223872
-
The Sinorhizobium meliloti stringent response affects multiple aspects of symbiosis
-
Wells, D. H., and S. R. Long. 2002. The Sinorhizobium meliloti stringent response affects multiple aspects of symbiosis. Mol. Microbiol. 43:1115-1127.
-
(2002)
Mol. Microbiol.
, vol.43
, pp. 1115-1127
-
-
Wells, D.H.1
Long, S.R.2
-
36
-
-
0141446074
-
Acid-adaptive genes of Helicobacter pylori
-
Wen, Y., E. A. Marcus, U. Matrubutham, M. A. Gleeson, D. R. Scott, and G. Sachs. 2003. Acid-adaptive genes of Helicobacter pylori. Infect. Immun. 71:5921-5939.
-
(2003)
Infect. Immun.
, vol.71
, pp. 5921-5939
-
-
Wen, Y.1
Marcus, E.A.2
Matrubutham, U.3
Gleeson, M.A.4
Scott, D.R.5
Sachs, G.6
-
37
-
-
0025992789
-
Residual guanosine 3′,5′-bispyrophosphate synthetic activity of relA-null mutants can be eliminated by spotT-null mutations
-
Xiao, H., M. Kalman, K. Ikehara, S. Zemel, G. Glaser, and M. Cashel. 1991. Residual guanosine 3′,5′-bispyrophosphate synthetic activity of relA-null mutants can be eliminated by spotT-null mutations. J. Biol. Chem. 266:5980-5990.
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 5980-5990
-
-
Xiao, H.1
Kalman, M.2
Ikehara, K.3
Zemel, S.4
Glaser, G.5
Cashel, M.6
|