Molecular contacts for chlorosome envelope proteins revealed by cross-linking studies with chlorosomes from Chlorobium tepidum

Biochemistry

Volumn 45, Issue 30, 2006, Pages 9095-9103

  Li, Hui ^a   Frigaard, Niels Ulrik ^b   Bryant, Donald A ^a  

^a PENNSYLVANIA STATE UNIVERSITY   (United States)

^b UNIVERSITY OF COPENHAGEN   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

ALDEHYDES; ANTIBODIES; BACTERIA; DIMERS; ELECTROPHORESIS; MOLECULAR STRUCTURE; MUTAGENESIS;

CHLOROBIUM TEPIDUM; CROSS-LINKED PRODUCTS; FENNA-MATTHEWS-OLSON PROTEIN; LIGHT-HARVESTING ANTENNAE;

PROTEINS;

1 (3 DIMETHYLAMINOPROPYL) 3 ETHYLCARBODIIMIDE; BACTERIAL PROTEIN; DIMER; ENVELOPE PROTEIN; GLUTARALDEHYDE; POLYCLONAL ANTIBODY; PROTEIN CSMA; PROTEIN CSMB; PROTEIN CSMC; PROTEIN CSMD; PROTEIN CSME; PROTEIN CSMF; PROTEIN CSMH; PROTEIN CSMI; PROTEIN CSMJ; PROTEIN CSMX; PROTEIN PRECURSOR; UNCLASSIFIED DRUG;

ARTICLE; BACTERIUM MUTANT; CHLOROBI; CHLOROBIUM; CHLOROBIUM TEPIDUM; CHLOROFLEXI; CHLOROSOME; CONTROLLED STUDY; CROSS LINKING; GEL ELECTROPHORESIS; IMMUNOBLOTTING; LIGHT HARVESTING SYSTEM; NONHUMAN; PRIORITY JOURNAL; PROTEIN LOCALIZATION; PROTEIN PROTEIN INTERACTION;

BACTERIAL PROTEINS; CHLOROBIUM; CROSS-LINKING REAGENTS; IRON-SULFUR PROTEINS;

BACTERIA (MICROORGANISMS); CHLOROBACULUM TEPIDUM; CHLOROBI; CHLOROFLEXI; CHLOROFLEXI (CLASS);

EID: 33746589834     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi060776y     Document Type: Article

References (36)

1. Blankenship, R. E. (2002) Molecular mechanisms of photosynthesis, Blackwell Science Ltd., Oxford, U.K.
2. Frigaard, N.-U., and Bryant, D. A. (2006) Chlorosomes: Antenna organelles in green photosynthetic bacteria, in Microbiology Monographs, Volume 2: Complex Intracellular Structures in Prokaryotes (Shively, J. M., Ed), pp 79-114, Springer-Verlag, Berlin.
3. Blankenship, R. E., Olson, J. M., and Miller, M. (1995) Antenna complexes from green photosynthetic bacteria, in Anoxygenic Photosynthetic Bacteria (Blankenship, R. E., Madigan, M. T., and Bauer, C. E., Eds.) pp 399-435, Kluwer Academic Publishers, Dordrecht, The Netherlands.
4. Blankenship, R. E., and Matsuura, K. (2003) Antenna complexes from green photosynthetic bacteria, in Light-Harvesting Antenna in Photosynthesis (Green, B. R., and Parson, W. W., Eds.) pp 195-217, Kluwer Academic Publishers, Dordrecht, The Netherlands.
5. Staehelin, L. A., Golecki, J. R., Fuller, R. C., and Drews, G. (1978) Visualization of the supramolecular architecture of chlorosomes (Chlorobium type vesicles) in freeze-fractured cells of Chloroflexus aurantiacus, Arch. Microbiol. 119, 269-277.
6. Staehelin, L. A., Golecki, J. R., and Drews, G. (1980) Supramolecular organization of chlorosomes (Chlorobium vesicles) and of their membrane attachments sites in Chlorobium limicola, Biochim. Biophys. Acta 589, 30-45.
7. Oelze, J., and Golecki, J. R. (1995) Membranes and chlorosomes of green bacteria: Structure, composition and development, in Anoxygenic Photosynthetic Bacteria (Blankenship, R. E., Madigan, M. T., and Bauer, C. E., Eds.) pp 259-278, Kluwer Academic Publishers, Dordrecht, The Netherlands.
8. Vassilieva, E. V., Stirewalt, V. L., Jakobs, C. U., Frigaard, N.-U., Inoue-Sakamoto, K., Baker, M. A., Sotak, A., and Bryant, D. A. (2002) Subcellular localization of chlorosome proteins in Chlorobium tepidum and characterization of three new chlorosome proteins: CsmF, CsmH, and CsmX, Biochemistry 41, 4358-4370.
9. Chung, S., Frank, G., Zuber, H., and Bryant, D. A. (1994) Genes encoding two chlorosome proteins from the green sulfur bacteria Chlorobium vibrioforme strain 8327D and Chlorobium tepidum, Photosynth. Res. 41, 261-275.
10. Chung, S., Jakobs, C. U., Ormerod, J. G., and Bryant, D. A. (1995) Protein components of chlorosomes from Chlorobium tepidum and interposon mutagenesis of csmA and csmC from Chlorobium vibrioforme 8327D, in Photosynthesis: From Light to Biosphere (Mathis, P., Ed.) Vol. I, pp 11-16, Kluwer Academic Publishers, Dordrecht, The Netherlands.
11. Chung, S., and Bryant, D. A. (1996) Characterization of csmB genes, encoding a 7.5 kDa protein of the chlorosome envelope, from the green sulfur bacteria Chlorobium vibrioforme 8327D and Chlorobium tepidum, Arch. Microbiol. 166, 234-244.
12. Chung, S., and Bryant, D. A. (1996) Characterization of the csmD and csmE genes from Chlorobium tepidum. The CsmA, CsmC, CsmD, and CsmE proteins are components of the chlorosome envelope, Photosynth. Res. 50, 41-59.
13. Vassilieva, E. V., Antonkine, M. L., Zybailov, B. L., Yang, F., Jakobs, C. U., Golbeck, J. H., and Bryant, D. A. (2001) Electron transfer may occur in the chlorosome envelope: The Csm1 and CsmJ proteins of chlorosomes are 2Fe-2S ferredoxins, Biochemistry 40, 464-473.
14. Bryant, D. A., Vassilieva, E. V., Frigaard, N.-U., and Li, H. (2002) Selective protein extraction from Chlorobium tepidum chlorosomes using detergents. Evidence that CsmA forms multimers and binds bacteriochlorophyll a, Biochemistry 41, 14403-14411.
15. Frigaard, N.-U., Li, H., Martinsson, P., Das, S. K., Frank, H. A., Aartsma, T. J., and Bryant, D. A. (2005) Isolation and characterization of carotenosomes from a bacteriochlorophyll c-less mutant of Chlorobium tepidum, Photosynth. Res. 86, 101-111.
16. Montano, G. A., Wu, H.-M., Lin, S., Brune, D. C., and Blankenship, R. E. (2003) Isolation and characterization of the B798 light-harvesting baseplate from the chlorosomes of Chloroflexus aurantiacus, Biochemistry 42, 10246-10251.
17. Vassilieva, E. V., Frigaard, N.-U., and Bryant, D. A. (2000) Chlorosomes: The light-harvesting complexes of the green bacteria, Spectrum 13, 7-13.
18. Milks, K. J., Danielsen, M., Persson, S., Jensen, O. N., Cox, R. P., and Miller, M. (2005) Chlorosome proteins studied by MALDITOF-MS: Topology of CsmA in Chlorobium tepidum, Photosynth. Res. 86, 113-121.
19. Vassilieva, E. V., and Bryant, D. A. (1998) Selective extraction of proteins from Chlorobium tepidum chlorosomes, in Photosynthesis: Mechanisms and Effects (Garab, G., Ed.) Vol. I, pp 105-108, Kluwer Academic Publishers, Dordrecht, The Netherlands.
20. Frigaard, N.-U., Voigt, G. D., and Bryant, D. A. (2002) Chlorobium tepidum mutant lacking bacteriochlorophyll c made by inactivation of the bchK gene, encoding bacteriochlorophyll c synthase, J. Bacteriol. 184, 3368-3376.
21. Frigaard, N.-U., Li, H., Milks, K. J., and Bryant, D. A. (2004) Nine mutants of Chlorobium tepidum each unable to synthesize a different chlorosome protein still assemble functional chlorosomes, J. Bacteriol. 186, 646-653.
22. Wahlund, T. M., and Madigan, M. T. (1995) Genetic transfer by conjugation in the thermophilic green sulfur bacterium Chlorobium tepidum, J. Bacteriol. 177, 2583-2588.
23. Wahlund, T. M., Woese, C. R., Castenholz, R. W., and Madigan, M. T. (1991) A thermophilic green sulfur bacterium from New Zealand hot springs, Chlorobium tepidum sp. nov., Arch. Microbiol. 156, 81-90.
24. Li, H. (2006) Organization and function of chlorosome proteins in the green sulfur bacterium Chlorobium tepidum, Ph.D. Thesis, The Pennsylvania State University, University Park, PA.
25. Frigaard, N.-U., and Bryant, D. A. (2001) Chromosomal gene inactivation in the green sulfur bacterium Chlorobium tepidum by natural transformation, Appl. Environ. Microbiol. 67, 2538-2544.
26. Schägger, H., and von Jagow, G. (1987) Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis of the separation of proteins in the range from 1 to 100 kDa, Anal. Biochem. 166, 368-379.
27. Blum, H., Beier, H., and Gross, H. J. (1987) Improved silver staining of plant proteins, RNA and DNA in polyacrylamide gels, Electrophoresis 8, 93-99.
28. Wong, S. S. (1991) Chemistry of protein conjugation and cross-linking, Sirsi Corp., Huntsville, AL.
29. Holo, H., Broch-Due, M., and Ormerod, J. G. (1985) Glycolipids and the structure of chlorosomes in green bacteria, Arch. Microbiol. 143, 94-99.
30. Ruiz, N., Kahne, D., and Silhavy, T. J. (2006) Advances in understanding bacterial outer-membrane biogenesis, Nat. Rev. Microbiol. 4, 57-66.
31. Luirink, J., von Heijne, G., Houben, E., and de Gier, J. W. (2005) Biogenesis of inner membrane proteins in Escherichia coli, Annu. Rev. Microbiol. 59, 329-355.
32. van der Laan, M., Nouwen, N. P., and Driessen, A. J. (2005) YidC: An evolutionary conserved device for the assembly of energy-transducing membrane proteins, Curr. Opin. Microbiol. 8, 182-187.
33. Los, D. A., and Murata, N. (2004) Membrane fluidity and its roles in the perception of environmental signals, Biochim. Biophys. Acta 1666, 142-157.
34. Sakuragi, Y., Frigaard, N., Shimada, K., and Matsuura, K. (1999) Association of bacteriochlorophyll a with the CsmA protein in chlorosomes of the photosynthetic green filamentous bacterium Chloroflexus aurantiacus, Biochim. Biophys. Acta 1413, 172-180.
35. van Rossum, B. J., Steensgaard, D. B., Mulder, F. M., Boender, G. J., Schaffner, K., Holzwarth, A. R., and de Groot, H. J. M. (2001) A refined model of the chlorosomal antennae of the green bacterium Chlorobium tepidum from proton chemical shift contraints obtained with high-field 2-D and 3-D MAS NMR dipolar correlation spectroscopy, Biochemistry 40, 1587-1595.
36. Pčenčík, J., Ikonen, T. P., Laurinmäki, P., Merckel, M. C., Butcher, S. J., Serimaa, R. E., and Tuma, R. (2004) Lamellar organization of pigments in chlorosomes, the light harvesting complexes of green photosynthetic bacteria, Biophys. J. 87, 1165-1172.