Genetic mapping reveals a single major QTL for bacterial wilt resistance in Italian ryegrass (Lolium multiflorum Lam.)

Theoretical and Applied Genetics

Volumn 113, Issue 4, 2006, Pages 661-671

  Studer, Bruno ^a   Boller, Beat ^a   Herrmann, Doris ^a   Bauer, Eva ^b   Posselt, Ulrich K ^b   Widmer, Franco ^a   Kölliker, Roland ^a  

^a AGROSCOPE RECKENHOLZ TÄNIKON RESEARCH STATION ART   (Switzerland)

^b UNIVERSITY OF HOHENHEIM   (Germany)

Author keywords

Disease resistance; Linkage mapping; Lolium multiflorum; Quantitative trait loci (QTL); Xanthomonas translucens pv. graminis

Indexed keywords

BACTERIA; CROPS; SEED;

DISEASE RESISTANCE; LINKAGE MAPPING; LOLIUM MULTIFLORUM; QUANTITATIVE TRAIT LOCI (QTL); XANTHOMONAS TRANSLUCENS PV. GRAMINIS;

GENETIC ENGINEERING;

ARTICLE; BREEDING; CHROMOSOME MAP; GENETIC LINKAGE; GENETIC MARKER; GENETICS; INNATE IMMUNITY; LOLIUM; MICROBIOLOGY; PHENOTYPE; PLANT DISEASE; QUANTITATIVE TRAIT LOCUS; SEEDLING;

BREEDING; CHROMOSOME MAPPING; GENETIC MARKERS; IMMUNITY, NATURAL; LINKAGE (GENETICS); LOLIUM; PHENOTYPE; PLANT DISEASES; QUANTITATIVE TRAIT LOCI; SEEDLING;

BACTERIA; GRASSES; RYE; SEEDLINGS;

BACTERIA (MICROORGANISMS); LOLIUM; LOLIUM MULTIFLORUM; XANTHOMONAS; XANTHOMONAS TRANSLUCENS PV. GRAMINIS;

EID: 33746384876     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-006-0330-2     Document Type: Article

References (68)

1. Adams E, Roldán-Ruiz I, Depicker A, van Bockstaele E, de Loose M (2000) A maternal factor conferring resistance to crown rust in Lolium multiflorum cv. "Axis". Plant Breed 119:182-184
2. Aldaoud R, Anderson MW, Reed KFM, Smith KF (2004) Evidence of pathotypes among Australian isolates of crown rust infecting perennial ryegrass. Plant Breed 123:395-397
3. Andersen JR, Lübberstedt T (2003) Functional markers in plants. Trends Plant Sci 8:554-560
4. Baker B, Zambryski P, Staskawicz B, Dinesh-Kumar SP (1997) Signaling in plant-microbe interactions. Science 276:726-733
5. Bert PF, Charmet G, Sourdille P, Hayward MD, Balfourier F (1999) A high-density molecular map for ryegrass (Lolium perenne) using AFLP markers. Theor Appl Genet 99:445-452
6. Boller B, Tanner P, Schubiger FX, Streckeisen P (2001) Selecting meadow fescue ecotypes for reduced susceptibility to bacterial wilt. In: Monjardino P, da Câmara Machado A, Carnide V (eds) Breeding for stress tolerance in fodder crops and amenity grasses. Department of Agricultural Sciences, University of Azores, Terceira, pp 103-107
7. Brinkerhoff LA (1970) Variation in Xanthomonas malvacearum and its relation to control. Annu Rev Phytopathol 8:85-110
8. Brummer EC (1999) Capturing heterosis in forage crop cultivar development. Crop Sci 39:943-954
9. Castiglioni P, Ajmone-Marsan P, van Wijk R, Motto M (1999) AFLP markers in a molecular linkage map of maize: codominant scoring and linkage group distribution. Theor Appl Genet 99:425-431
10. Channon AG, Hissett R (1984) The incidence of bacterial wilt caused by Xanthomonas campestris pv. graminis in pasture grasses in the West of Scotland. Plant Pathol 33:113-121
11. Delannoy E, Lyon BR, Marmey P, Jalloul A, Daniel JF, Montillet JL, Essenberg M, Nicole M (2005) Resistance of cotton towards Xanthomonas campestris pv. malvacearum. Annu Rev Phytopathol 43:63-82
12. Devos KM (2005) Updating the 'crop circle'. Curr Opin Plant Biol 8:155-162
13. Dumsday JL, Smith KF, Forster JW, Jones ES (2003) SSR-based genetic linkage analysis of resistance to crown rust (Puccinia coronata f. sp. lolii) in perennial ryegrass (Lolium perenne). Plant Pathol 52:628-637
14. Egli T, Goto M, Schmidt D (1975) Bacterial wilt, a new forage grass disease. J Phytopathol 82:111-121
15. Erickson D (2005) Mapping the future of QTL's. Heredity 95:417-418
16. Essenberg M, Bayles MB, Samad RA, Hall JA, Brinkerhoff LA, Verhalen LM (2002) Four near-isogenic lines of cotton with different genes for bacterial blight resistance. Phytopathology 92:1323-1328
17. Falconer DS, Mackay TFC (1996) Introduction to quantitative genetics, 4th edn. Longman group Ltd, Essex
18. Faville MJ, Vecchies AC, Schreiber M, Drayton MC, Hughes LJ, Jones ES, Guthridge KM, Smith KF, Sawbridge T, Spangenberg GC, Bryan GT, Forster JW (2004) Functionally associated molecular genetic marker map construction in perennial ryegrass (Lolium perenne L.). Theor Appl Genet 110:12-32
19. Fujimori M, Hayashi K, Hirata M, Ikeda S, Takahashi W, Mano Y, Sato H, Takamizo T, Mizuno K, Fujiwara T, Sugita S (2004) Molecular breeding and functional genomics for tolerance to biotic stress. In: Hopkins A, Wang ZY, Mian R, Sledge M, Barker RE (eds) Molecular breeding of forage and turf. Kluwer, Dordrecht, pp 21-35
20. Gnanamanickam SS, Priyadarisini VB, Narayanan NN, Vasudevan P, Kavitha S (1999) An overview of bacterial blight disease of rice and strategies for its management. Curr Sci 77:1435-1444
21. Grattapaglia D, Sederoff R (1994) Genetic linkage maps of Eucalyptus grandis and Eucalyptus urophylla using a pseudo-testcross: mapping strategy and RAPD markers. Genetics 137:1121-1137
22. Gu K, Yang B, Tian D, Wu L, Wang D, Sreekala C, Yang F, Chu Z, Wang G-L, White FF, Yin Z (2005) R gene expression induced by a type-III effector triggers disease resistance in rice. Nature 435:1122-1125
23. 2 population. Genetics 148:479-494
24. Hayward MD, Forster JW, Jones JG, Dolstra O, Evans C, McAdam NJ, Hossain KG, Stammers M, Will J, Humphreys MO, Evans GM (1998) Genetic analysis of Lolium. I. Identification of linkage groups and the establishment of a genetic map. Plant Breed 117:451-455
25. Ikeda S (2005) Isolation of disease resistance gene analogs from Italian ryegrass (Lolium multiflorum Lam.). Grassl Sci 51:63-70
26. Imaizumi S, Honda M, Fujimori T (1999) Effect of temperature on the control of annual bluegrass (Poa annua L.) with Xanthomonas campestris pv. poae (JT-P482). Biol Control 16:13-17
27. Inoue M, Gao Z, Hirata M, Fujimori M, Cai H (2004) Construction of a high-density linkage map of Italian ryegrass (Lolium multiflorum Lam.) using restriction fragment length polymorphism, amplified fragment length polymorphism, and telomeric repeat associated sequence markers. Genome 47:57-65
28. Jones ES, Dupal MP, Dumsday JL, Hughes LJ, Forster JW (2002a) An SSR-based genetic linkage map for perennial ryegrass (Lolium perenne L.). Theor Appl Genet 105:577-584
29. Jones ES, Mahoney NL, Hayward MD, Armstead IP, Jones JG, Humphreys MO, King IP, Kishida T, Yamada T, Balfourier F, Charmet G, Forster JW (2002b) An enhanced molecular marker based genetic map of perennial ryegrass (Lolium perenne) reveals comparative relationships with other Poaceae genomes. Genome 45:282-295
30. Kauffman HE, Reddy APK, Hsieh SPY, Merca SD (1973) An improved technique for evaluating resistance of rice varieties to Xanthomonas oryzae. Plant Dis Rep 57:537-541
31. Kölliker R, Herrmann D, Boller B, Widmer F (2003) Swiss Mattenklee landraces, a distinct and diverse genetic resource of red clover (Trifolium pratense L.). Theor Appl Genet 107:306-315
32. Kölliker R, Kraehenbuehl R, Boller B, Widmer F (2006) Genetic diversity and pathogenicity of the grass pathogen Xanthomonas translucens pv. graminis. Syst Appl Microbiol 29:109-119
33. Kosambi DD (1944) The estimation of map distances from recombination values. Ann Eugen 12:172-175
34. Kpémoua K, Boher B, Nicole M, Calatayud P, Geiger JP (1996) Cytochemistry of defense responses in cassava infected by Xanthomonas campestris pv. manihotis. Can J Microbiol 42:1131-1143
35. Kubik C, Sawkins M, Meyer WA, Gaut BS (2001) Genetic diversity in seven perennial ryegrass (Lolium perenne L.) cultivars based on SSR markers. Crop Sci 41:1565-1572
36. Lauvergeat V, Barre P, Bonnet M, Ghesquière M (2005) Sixty simple sequence repeat markers for use in the Festuca-Lolium complex of grasses. Mol Ecol Notes 5:401-405
37. Lehmann J, Briner H-U, Schubiger FX, Mosimann E (2000) Italian and hybrid ryegrass: cultivar trials 97 to 99. Agrarforschung 7:124-129
38. Leyns F (1993) Xanthomonas campestris pv. graminis: cause of bacterial wilt of forage grasses. In: Swings JG, Civerolo EL (eds) Xanthomonas. Chapman & Hall, London, pp 55-57
39. Lopez C, Soto M, Restrepo S, Piégu B, Cooke R, Delseny M, Tohme J, Verdier V (2005) Gene expression profile in response to Xanthomonas axonopodis pv. manihotis infection in cassava using a cDNA microarray. Plant Mol Biol 57:393-410
40. Meyers BC, Dickerman AW, Michelmore RW, Sivaramakrishnan S, Sobral BW, Young ND (1999) Plant disease resistance genes encode members of an ancient and diverse protein family within the nucleotide-binding superfamily. Plant J 20:317-332
41. Michel VV (2001) Interactions between Xanthomonas campestris pv. graminis strains and meadow fescue and Italian ryegrass cultivars. Plant Dis 85:538-542
42. Mutlu N, Miklas P, Reiser J, Coyne D (2005) Backcross breeding for improved resistance to common bacterial blight in pinto bean (Phaseolus vulgaris L.). Plant Breed 124:282-287
43. Muylle H, Baert J, Van Bockstaele E, Moerkerke B, Goetghebeur E, Roldán-Ruiz I (2005a) Identification of molecular markers linked with crown rust (Puccinia coronata f. sp. lolii) resistance in perennial ryegrass (Lolium perenne) using AFLP markers and a bulked segregant approach. Euphytica 143:135-144
44. Muylle H, Baert J, Van Bockstaele E, Pertijs J, Roldán-Ruiz I (2005b) Four QTLs determine crown rust (Puccinia coronata f. sp. lolii) resistance in a perennial ryegrass (Lolium perenne) population. Heredity 95:348-357
45. Newbury HJ (2003) Plant molecular breeding. Blackwell, Oxford
46. O'Hanlon PC, Peakall R (2000) A simple method for the detection of size homoplasy among amplified fragment length polymorphism fragments. Mol Ecol 9:815-816
47. Paul VH, Smith IM (1989) Bacterial pathogens of Gramineae: systematic review and assessment of quarantine status for the EPPO region. EPPO Bull 19:33-42
48. Rao KK, Lakshminarasu M, Jena KK (2002) DNA markers and marker-assisted breeding for durable resistance to bacterial blight disease in rice. Biotechnol Adv 20:33-47
49. Rechsteiner MP, Widmer F, Kölliker R (2006) Expression profiling of Italian ryegrass (Lolium multiflorum Lam.) during infection with the bacterial wilt inducing pathogen Xanthomonas translucens pv. graminis. Plant Breed 125:43-51
50. Saha MC, Mian MAR, Eujayl I, Zwonitzer JC, Wang L, May GD (2004) Tall fescue EST-SSR markers with transferability across several grass species. Theor Appl Genet 109:783-791
51. Schmidt D (1988a) Bacterial wilt of forage grasses: strategies to limit disease dispersal through mowing. Revue Suisse d'agriculture 20:351-357
52. Schmidt D (1988b) Prevention of bacterial wilt of grasses by phylloplane bacteria. J Phytopathol 122:253-260
53. Schmidt D, Nüesch B (1980) Resistance to bacterial wilt (Xanthomonas graminis) increases yield and persistency of Lolium multiflorum. EPPO Bull 10:335-339
54. Schön CC, Utz HF, Groh S, Truberg B, Openshaw S, Melchinger AE (2004) Quantitative trait locus mapping based on resampling in a vast maize testcross experiment and its relevance to quantitative genetics for complex traits. Genetics 167:485-498
55. Stam P (1993) Construction of integrated genetic linkage maps by means of a new computer package: JoinMap. Plant J 3:739-744
56. Thorogood D, Paget MF, Humphreys MO, Turner LB, Armstead IP, Roderick HW (2001) QTL analysis of crown rust resistance in perennial ryegrass - implications for breeding. Int Turfgrass Soc Res J 9:218-223
57. Thorogood D, Kaiser WJ, Jones JG, Armstead I (2002) Self-incompatibility in ryegrass 12. Genotyping and mapping the S and Z loci of Lolium perenne L. Heredity 88:385-390
58. Thorogood D, Armstead IP, Turner LB, Humphreys MO, Hayward MD (2005) Identification and mode of action of self-compatibility loci in Lolium perenne L. Heredity 94:356-363
59. Utz HF (2000) PLABSTAT: a computer program for statistical analysis of plant breeding experiments. Institute of Plant Breeding, Seed Science and Population Genetics. University of Hohenheim, Stuttgart
60. Utz HF, Melchinger AE (1996) PLABQTL: a program for composite interval mapping of QTL. J Quant Trait Loci 2(1). http://www.uni-hohenheim.de/ ∼ipspwww/soft.html
61. Van Ooijen JW (2004) MapQTL® 5, Software for the mapping of quantitative trait loci in experimental populations. Kyazma B. V., Wageningen
62. Van Ooijen JW, Voorrips RE (2001) JoinMap® 3.0, Software for the calculation of genetic linkage maps. Plant Research International, Wageningen
63. Vekemans X, Beauwens T, Lemaire M, Roldán-Ruiz I (2002) Data from amplified fragment length polymorphism (AFLP) markers show indication of size homoplasy and of a relationship between degree of homoplasy and fragment size. Mol Ecol 11:139-151
64. Verdier V, Restrepo S, Mosquera G, Jorge V, Lopez C (2004) Recent progress in the characterization of molecular determinants in the Xanthomonas axonopodis pv. manihotis-cassava interaction. Plant Mol Biol 56:573-584
65. Visscher PM, Goddard ME (2004) Prediction of the confidence interval of quantitative trait loci location. Behav Genet 34:477-482
66. Vos P, Hogers R, Bleeker M, Reijans M, Van de Lee T, Hornes M, Frijters A, Pot J, Peleman J, Kuiper M, Zabeau M (1995) AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res 23:4407-4414
67. Yamada T, Forster JW, Humphreys MW, Takamizo T (2005) Genetics and molecular breeding in Lolium/Festuca grass species complex. Grassl Sci 51:89-106
68. Yang WC, Francis DM (2005) Marker-assisted selection for combining resistance to bacterial spot and bacterial speck in tomato. J Am Soc Hortic Sci 130:716-721