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Volumn 4029 LNAI, Issue , 2006, Pages 420-429

A graph-based genetic algorithm for the multiple sequence alignment problem

Author keywords

[No Author keywords available]

Indexed keywords

BENCHMARKING; COMPUTATIONAL COMPLEXITY; COMPUTER SOFTWARE; GRAPH THEORY; PROBLEM SOLVING; SENSITIVITY ANALYSIS;

EID: 33746218698     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/11785231_45     Document Type: Conference Paper
Times cited : (3)

References (12)
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    • Altschul, S.F.1
  • 4
    • 0023084055 scopus 로고
    • Progressive sequence alignment as a prerequisite to correct phylogenetic trees
    • Feng, D.-F. and Doolitle, R.F.: Progressive sequence alignment as a prerequisite to correct phylogenetic trees. J. Mol. Evol. 25 (1987) 351-360.
    • (1987) J. Mol. Evol. , vol.25 , pp. 351-360
    • Feng, D.-F.1    Doolitle, R.F.2
  • 6
    • 33846940542 scopus 로고    scopus 로고
    • A distributed approach for multiple sequence alignment using a parallel virtual machine
    • Shanghai, China
    • Lopes, H.S. and Moritz, G.L.: A distributed approach for multiple sequence alignment using a parallel virtual machine. In: Proc. 27th Annual International Conference of IEEE EMBS, Shanghai, China, 2005.
    • (2005) Proc. 27th Annual International Conference of IEEE EMBS
    • Lopes, H.S.1    Moritz, G.L.2
  • 7
    • 0026458378 scopus 로고
    • Amino acid substitution matrices from protein blocks
    • Henikoff, S. and Henikoff, J.G.: Amino acid substitution matrices from protein blocks. Proc. Natl. Acad. Sci. USA 89 (1992) 10915-10919.
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 10915-10919
    • Henikoff, S.1    Henikoff, J.G.2
  • 8
    • 0024234855 scopus 로고
    • CLUSTAL: A package for performing multiple sequence alignments on a microcomputer
    • Higgins, D.G. and Sharp, P.M.: CLUSTAL: a package for performing multiple sequence alignments on a microcomputer. Gene 73 (1988) 237-244.
    • (1988) Gene , vol.73 , pp. 237-244
    • Higgins, D.G.1    Sharp, P.M.2
  • 9
    • 0014757386 scopus 로고
    • A general method applicable to the search for similarities in the amino acid sequence of two proteins
    • Needleman, S.B. and Wunsch, C.D.: A general method applicable to the search for similarities in the amino acid sequence of two proteins. J. Mol. Biol. 48 (1970) 443-453.
    • (1970) J. Mol. Biol. , vol.48 , pp. 443-453
    • Needleman, S.B.1    Wunsch, C.D.2
  • 10
    • 0029872694 scopus 로고    scopus 로고
    • SAGA: Sequence alignment by genetic algorithm
    • Notredame,C. and Higgins, D.G.: SAGA: sequence alignment by genetic algorithm. Nucl. Acid. Res. 24 (1996) 1515-1524.
    • (1996) Nucl. Acid. Res. , vol.24 , pp. 1515-1524
    • Notredame, C.1    Higgins, D.G.2
  • 11
    • 0032988850 scopus 로고    scopus 로고
    • BAliBASE: A benchmark alignments database for the evaluation of multiple sequence alignment program
    • Thompson, J., Plewniak, F. and Poch, O.: BAliBASE: A benchmark alignments database for the evaluation of multiple sequence alignment program. Bioinformatics 15 (1999) 87-88.
    • (1999) Bioinformatics , vol.15 , pp. 87-88
    • Thompson, J.1    Plewniak, F.2    Poch, O.3
  • 12
    • 0028679709 scopus 로고
    • On the complexity of multiple sequence alignment
    • Wang, L. and Jiang, T.: On the complexity of multiple sequence alignment. J. Comp. Biol. 1 (1994) 337-348.
    • (1994) J. Comp. Biol. , vol.1 , pp. 337-348
    • Wang, L.1    Jiang, T.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.