Biophysical and phenomenological models of multiple spike interactions in spike-timing dependent plasticity

International Journal of Neural Systems

Volumn 16, Issue 2, 2006, Pages 79-97

  Badoual, Mathilde ^a   Zou, Quan ^a   Davison, Andrew P ^a   Rudolph, Michael ^a   Bal, Thierry ^a   Frégnac, Yves ^a   Destexhe, Alain ^a  

^a CNRS   (France)

Author keywords

Calcium; Computational models; Enzymes; Kinetics; LTD; LTP; STDP; Synaptic plasticity

Indexed keywords

ACTION POTENTIAL; ANIMAL; ARTICLE; BIOLOGICAL MODEL; BIOPHYSICS; COMPUTER SIMULATION; METHODOLOGY; NERVE CELL; NERVE CELL PLASTICITY; PHYSIOLOGY; SYNAPSE;

ACTION POTENTIALS; ANIMALS; BIOPHYSICS; COMPUTER SIMULATION; MODELS, NEUROLOGICAL; NEURONAL PLASTICITY; NEURONS; SYNAPSES;

EID: 33746208993     PISSN: 01290657     EISSN: None     Source Type: Journal    
DOI: 10.1142/S0129065706000524     Document Type: Article

References (75)

1. N. L. Allbritton, T. Meyer and L. Stryer, Range of messenger action of calcium ion and inositol 1,4,5-triphosphate, Science 258 (1992) 1812-1815.
2. A. Artola, S. Brocher and W. Singer, Different voltage-dependent thresholds for inducing long-term depression and long-term potentiation in slices of rat visual cortex, Nature 347 (1990) 69-72.
3. A. Artola and W. Singer, Long-term depression of excitatory synaptic transmission and its relationship to long-term potentiation, Trends Neurosci. 16 (1993) 480-487.
4. M. F. Bear, Mechanism for a sliding synaptic modification threshold, Neuron 15 (1995) 1-4.
5. M. F. Bear, L. N. Cooper and F. F. Ebner, A physiological basis for a theory of synapse modification, Science 237 (1987) 42-48.
6. C. C. Bell, V. Z. Han, Y. Sugawara and K. Grant, Synaptic plasticity in a cerebellum-like structure depends on temporal order, Nature 387 (1997) 278-281.
7. G. Q. Bi and M. M. Poo, Synaptic modifications in cultured hippocampal neurons dependence on spike timing, synaptic strength, and postsynaptic cell type, J. Neurosci. 18 (1998) 10464-10472.
8. E. L. Bienenstock, L. N. Cooper and P. W. Munro, Theory for the development of neuron selectivity: orientation specificity and binocular interaction in visual cortex, J. Neurosci. 2 (1982) 32-48.
9. C. A. Boettiger and A. J. Doupe, Developmentally restricted synaptic plasticity in a songbird nucleus required for song learning, Neuron 31 (2001) 809-818.
10. S. Brocher, A. Artola and W. Singer, Intracellular injection of Ca2+ chelators blocks induction of long-term depression in rat visual cortex, in Proc. Natl. Acad. Sci. (USA) 89 (1992), pp. 123-127.
11. G. Carmignoto and S. Vicini, Activity-dependent decrease in NMDA receptor responses during development of the visual cortex, Science 258 (1992) 1007-1011.
12. G. C. Castellani, E. M. Quinlan, L. N. Cooper and H. Z. Shouval, A biophysical model of bidirectional synaptic plasticity: dependence on AMPA and NMDA receptors, Proc. Natl. Acad. Sci. (USA) 98 (2001), pp. 12772-12777.
13. R. J. Colbran, Protein phosphatase and calcium/calmodulin-dependent protein kinase II-dependent synaptic plasticity, J. Neurosci. 24 (2004) 8404-8409.
14. R. J. Cormier, A. C. Greenwood and J. A. Connor, Bidirectional synaptic plasticity correlated with the magnitude of dendritic calcium transients above a threshold, J. Neurophysiol. 85 (2001) 399-406.
15. J. A. Cummings, R. M. Mulkey, R. A. Nicoll and R. C. Malenka, Ca2+ signaling requirements for long-term depression in the hippocampus, Neuron 16 (1996) 825-833.
16. 2+-controlled phosphorylation and dephosphorylation pathways, Eur. J. Neurosci. 17 (2003) 2521-2528.
17. A. Destexhe, A. Babloyantz and T. J. Sejnowski, Ionic mechanisms for intrinsic slow oscillations in thalamic relay neurons, Biophys. J. 65 (1993) 1538-1552.
18. A. Destexhe, Z. F. Mainen and T. J. Sejnowski, An efficient method for computing synaptic conductances based on a kinetic model of receptor binding, Neural Comput. 6 (1994) 10-14.
19. A. Destexhe, Z. F. Mainen, T. J. Sejnowski, Kinetic models of synaptic transmission, in Methods In Neuronal Modeling, eds. C. Koch and I. Segev (MIT Press, Cambridge, MA) (1998), pp. 1-26.
20. S. M. Dudek and M. F. Bear, Homosynaptic long-term depression in area CA1 of hippocampus and effects of N-methyl-D-aspartate receptor blockade, Proc. Natl. Acad. Sci. (USA) 89 (1992) 4363-4367.
21. J. J. Eggermont, Neuronal pair and triplet interactions in the auditory midbrain of the leopard frog, J. Neurophysiol. 66 (1991) 1549-1563.
22. D. E. Feldman, Timing-based LTP and LTD at vertical inputs to layer 11/111 pyramidal cells in rat barrel cortex, Neuron 27 (2000) 45-56.
23. D. Feldmeyer, J. Lubke, R. A. Silver and B. Sakmann, Synaptic connections between layer 4 spiny neurone-layer 2/3 pyramidal cell pairs in juvenile rat barrel cortex: physiology and anatomy of interlaminar signaling within a, cortical column, J. Physiol. 538 (2002) 803-822.
24. Y. Frégnac, Hebbian synaptic plasticity, in Handbook of Brain Theory and Neural Networks, ed. M. A. Arbib (MIT Press, Cambridge MA) (2002), pp. 512-522.
25. Y. Frégnac and D. Shulz, Activity-dependent regulation of receptive field properties of cat area 17 by supervised Hebbian learning, J. Neurobiol. 41 (1999) 69-82.
26. R. C. Froemke and Y. Dan, Spike-Timing-dependent synaptic modification induced by natural spike trains, Nature 416 (2002) 433-438.
27. 2+ concentration exploring possible bases for a sliding synaptic modification threshold, Proc. Natl. Acad. Sci. (USA) 91 (1994) 3941-3945.
28. D. E. Goldman, Potential, impedance, and rectification in membranes, J. Gen. Physiol. 27 (1943) 37-60.
29. R. Gutig, R. Aharonov, S. Rotter and H. Sompolinsky, Learning input correlations through nonlinear temporally asymmetric Hebbian plasticity, J. Neurosci. 23 (2003) 3697-3714.
30. 2+/calmodulin- dependent protein kinases, Annu. Rev. Biochem. 61 (1992) 559-601.
31. K. M. Harris and S. B. Kater, Dendritic spines: cellular specializations imparting both stability and flexibility to synaptic function, Annu. Neurosci. 17 (1994) 341-371.
32. M. L. Hines and N. T. Carnevale, The NEURON simulation environment, Neural Comput. 9 (1997) 1179-1209.
33. A. L. Hodgkin and B. Katz, The effect of sodium ions on the electrical activity of the giant axon of the squid, J. Physiol. (London) 108 (1949) 37-77.
34. K. Holthoff, D. Tsay and R. Yuste, Calcium dynamics of spines depend on their dendritic location, Neuron 33 (2002) 425-437.
35. E. M. Izhikevich and N. S. Desai, Relating STDP to BCM, Neural Computation 15 (2003) 1511-1523.
36. C. E. Jahr and C. F. Stevens, Voltage dependence of NMDA-activated macroscopic conductances predicted by single-channel kinetics, J. Neurosci. 9 (1993) 3178-3182.
37. U. R. Karmarkar and D. V. Buonomano, A model of spike-timing dependent plasticity: one or two coincidence detectors? J. Neurophysiol. 88 (2002) 507-513.
38. A. Kirkwood and M. F. Bear, Homosynaptic long-term depression in the visual cortex, J. Neurosci. 14 (1994) 3404-3412.
39. W. B. Levy, and N. L. Desmond, The rules of elemental synaptic plasticity, in Modifications, Neuron selectivity and Nervous System Organization, eds. W. B. Levy, J. Anderson and S. Lehmkhule, (Erlbaum, New Jersey) (1985), pp. 105-121.
40. W. B. Levy and O. Steward, Temporal contiguity requirements for long-term associative potentiation/depression in the hippocampus, Neuroscience 8 (1983) 791-797.
41. J. E. Lisman, A mechanism for memory storage insensitive to molecular turnover: a, bistable autophosphorylating kinase, in Proc. Natl. Acad. Sci. (USA) 82 (1985), pp. 3055-3057.
42. J. E. Lisman, A mechanism for the Hebb and than anti-Hebb processes underlying learning and memory, in Proc. Natl. Acad. Sci. (USA) 86 (1989), pp. 9574-9578.
43. L. Liu, T. P. Wong, M. F. Pozza, K. Lingenhoehl, Y. Wang, M. Sheng, Y. P. Auberson and Y. T. Wang, Role of NMDA receptor subtypes in governing the direction of hippocampal synaptic plasticity, Science 304 (2004) 1021-1024.
44. G. Lynch, J. Larson, S. Kelso, G. Barrionuevo and F. Schottler, Intracellular injections of EGTA block induction of hippocampal long-term potentiation, Nature 305 (1983) 719-721.
45. J. C. Magee and D. A. Johnston, A synaptically controlled, associative signal for Hebbian plasticity in hippocampal neurons, Science 275 (1997) 209-213.
46. Z. F. Mainen and T. J. Sejnowski, Influence of dendritic structure on firing pattern in model neocortical neurons, Nature 382 (1996) 363-366.
47. R. C. Malenka, J. A. Kauer, R. S. Zucker and R. A. Nicoll, Postsynaptic calcium is sufficient for potentiation of hippocampal synaptic transmission, Science 242 (1988) 81-84.
48. H. Markram, P. J. Helm and B. Sakmann, Dendritic calcium transients evoked by single backpropagating action potentials in rat neocortical pyramidal neurons, J. Physiol. 485 (1995) 1-20.
49. H. Markram, J. Lubke, M. Frotscher and B. Sakmann, Regulation of synaptic efficacy by coincidence of postsynaptic Aps and EPSPs, Science 265 (1997) 774-777.
50. P. V. Massey, B. E. Johnson, P. R. Moult, Y. P. Auberson, M. W. Brown, E. Molnar, G. L. Collingridge and Z. I. Bashir, Differential roles of NR2A and NR2B-containing NMDA receptors in cortical long-term potentiation and long-term depression, J. Neurosci. 24 (2004) 7821-7828.
51. S. G. Miller and M. B. Kennedy, Regulation of brain type II Ca2+/calmodulin-dependent protein kinase by autophosphorylation: a Ca2+-triggered molecular switch, Cell 44 (1986) 861-870.
52. R. M. Mulkey and R. C. Malenka, Mechanisms underlying induction of homosynaptic long-term depression in area CA1 of the hippocampus, Neuron 9 (1992) 967-975.
53. G. Nase, J. Weishaupt, P. Stern, W. Singer and H. Monyer, Genetic and epigenetic regulation of NMDA receptor expression in the rat visual cortex, Eur. J. Neurosci. 11 (1999) 24320-24326.
54. D. Neveu and R. S. Zucker, Postsynaptic levels of [Ca2+]i needed to trigger LTD and LTP, Neuron 16 (1996) 619-629.
55. M. Nishiyama, K. Hong and K. Mikoshiba, Calcium stores regulate the polarity and input specificity of synaptic modification, Nature 408 (2000) 584-588.
56. S. Oliet, R. C. Malenka and R. A. Nicoll, Two distinct forms of long-term depression coexist in CA1 hippocampal pyramidal cells, Neuron 18 (1997) 969-982.
57. E. M. Quinlan, D. H. Olstein and M. F. Bear, Bidirectional, experience-dependent regulation of N-methyl-D-aspartate receptor subunit composition in the rat visual cortex during postnatal development, Proc. Natl. Acad. Sci. (USA) 96 (1999) 12876-12880.
58. A. René, N. Huguet, M. Pananceau and Y. Frégnac, An in vivo generalization of Hebbian plasticity rules in adult visual cortex to multiple pre-post synaptic activity correlation, Soc. Neurosci. Abstracts 29 (2003) 266.17.
59. J. E. Rubin, R. C. Gerkin, G.-Q. Bi and C. C. Chow, Calcium time course as a signal for spike-timing-dependent plasticity, J. Neurophysiol. 93 (2005) 2600-2613.
60. B. L. Sabatini, T. G. Oertner and K. Svoboda, The life cycle of Ca ions in dendritic spines, Neuron 33 (2002) 439-452.
61. B. L. Sabatini and K. Svoboda, Analysis of calcium channels in single spines using optical fluctuation analysis, Nature 406 (2000) 589-593.
62. W. Senn, H. Markram and M. Tsodyks, An algorithm for modifying neurotransmitter release probability based on pre- and postsynaptic spike timing, Neural Comput. 13 (2001) 35-67.
63. H. Z. Shouval, M. F. Bear and L. N. Cooper, A unified model of NMDA receptor-dependent bidirectional synaptic plasticity, in Proc. Natl. Acad. Sci. (USA) 99 (2002) 10831-10836.
64. H. Z. Shouval and G. Kalantzis, Stochastic properties of synaptic transmission affect the shape of spike time-dependent plasticity curves, J. Neurophysiol. 93 (2005) 1069-1073.
65. D. E. Shulz, D. J. Brasier and D. E. Feldman, Spike-timing dependent plasticity investigated using Whole-cell recording in rat somatosensory cortex (SI) in vivo, Soc. Neurosci. Abstracts 30 (2004) 57.1.
66. J. Sjostrom, G. G. Turrigiano and S. B. Nelson, Rate, timing, and cooperativity jointly determine cortical synaptic plasticity, Neuron 32 (2001) 1149-1164.
67. S. Song, K. D. Miller and L. F. Abbott, Competitive Hebbian learning through spike-timing-dependent synaptic plasticity, Nat. Neurosci. 3 (2000) 919-926.
68. G. J. Stuart and M. Hausser, Dendritic coincidence detection of EPSPs and action potentials, Nat. Neurosci. 4 (2001) 63-71.
69. M. C. van Rossum, G. Q. Bi and G. G. Turrigiano, Stable Hebbian learning from spike timing-dependent plasticity, J. Neurosci. 20 (2000) 8812-8821.
70. H. X. Wang, R. C. Gerkin, D. W. Nauen, G. Q. Bi, Coactivation and timing-dependent integration of synaptic potentiation and depression, Nat. Neurosci. 2 (2005) 187-193.
71. S. N. Yang, Y. G. Tang and R. S. Zucker, Selective induction of LTP and LTD by postsynaptic [Ca2+]i elevation, J. Neurophysiol. 81 (1999) 781-787.
72. H. Yasuda and T. Tsumoto, Long-term depression in rat visual cortex is associated with a lower rise of postsynaptic calcium than long-term potentiation, Neurosci. Res. 24 (1996) 265-274.
73. R. Yuste and W. Denk, Dendritic spines as basic functional units of neuronal integration, Nature 375 (1995) 682-684.
74. 2+/ Calmodulin-dependent protein kinase-phosphatase system, Biophys. J. 79(1) (2000) 2211-2221.
75. R. S. Zucker, Calcium- and activity-dependent synaptic plasticity, Curr. Opin. Neurobiol. 9 (1999) 305-313.