Development of real-time and conventional RT-PCR assays for the detection of potato yellow vein virus (PYVV)

Journal of Virological Methods

Volumn 136, Issue 1-2, 2006, Pages 24-29

  Lopez R ^a   Asensio, C ^b   Guzman, M M ^c   Boonham, N ^a  

^a CENTRAL SCIENCE LABORATORY   (United Kingdom)

^b INSTITUTO TECNOLÓGICO AGRARIO DE CASTILLA Y LEÓN   (Spain)

^c UNIVERSIDAD NACIONAL DE COLOMBIA   (Colombia)

Author keywords

Crinivirus; Potato yellow vein virus; Quarantine virus; TaqMan ; Whitefly transmitted

Indexed keywords

ANALYTIC METHOD; ARTICLE; CONTROLLED STUDY; INTERMETHOD COMPARISON; NONHUMAN; PLANT VIRUS; POTATO YELLOW VEIN VIRUS; PRIORITY JOURNAL; REAL TIME POLYMERASE CHAIN REACTION; RELIABILITY; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SOUTH AMERICA; VIRUS DETECTION; VIRUS ISOLATION;

CRINIVIRUS; PLANT DISEASES; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, VIRAL; SENSITIVITY AND SPECIFICITY;

POTATO YELLOW VEIN VIRUS; SOLANUM TUBEROSUM;

EID: 33746146992     PISSN: 01660934     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jviromet.2006.03.026     Document Type: Article

References (15)

1. Alba V. Viropatogenos. Conferencia Latinoamericana de Especialistas en Papa. Bogota, Colombia (1950) 52-58
2. Boonham N., Gonzalez Perez L., Mendez M., Lilia Peralta E., Blockley A., Walsh K., Barker I., and Mumford R. Development of a real-time RT-PCR assay for the detection of potato spindle tuber viroid. J. Virol. Methods 116 (2004) 139-146
3. Chang S., Puryear J., and Cairney J. A simple and efficient method for isolating RNA from pine trees. Plant Mol. Biol. Rep. 11 (1993) 113-116
4. EPPO/CABI. Quarantine Pests for Europe. second ed. (1997), CABI International, Wallingford, UK
5. Martelli G., Agranovsky A., Bar-Joseph M., Boscia D., Candresse T., Coutts R., Dolja V., Falk B., et al. The family Closteroviridae revised. Arch. Virol. 147 (2002) 2039-2044
6. Mumford R., Walsh K., Barker I., and Boonham N. Detection of Potao mop top virus and Tobacco rattle virus using a multiplex real-time fluorescent reverse-transcription polymerase chain reaction assay. Phytopathology 90 (2000) 448-453
7. Offei S., Arciniegas N., Muller G., Guzman M., Salazar L., and Coutts R. Molecular variation of Potato yellow vein virus isolates. Arch. Virol. 149 (2004) 821-827
8. Ratti C., Budge G., Ward L., Clover G., Rubies-Autonell C., and Henry C. Detection and relative quantitation of Soil-borne cereal mosaic virus (SBCMV) and Polymyxa graminis in winter wheat using real-time PCR (TaqMan). J. Virol. Methods 122 (2004) 95-103
9. Salazar L., Muller G., Querci M., Zapata J., and Owens R. Potato yellow vein virus: its host range, distribution in South America and identification as a crinivirus transmitted by Trialeurodes vaporariorum. Ann. Appl. Biol. 137 (2000) 7-19
10. Ward L., Beales P., Barnes A., and Lane C. A real-time PCR assay based method for routine diagnosis of Spongospora subterranea on potato tubers. J. Phytopathol. 152 (2004) 633-638
11. Ward L., Fenn M., and Henry C. A rapid method for direct detection of Polymyxa DNA in soil. Plant Pathol. 53 (2004) 485-490
12. Weller S., Elphinstone J., Smith N., Boonham N., and Stead D. Detection of Ralstonia solanacearum strains with a quantitative, multiplex, real-time, fluorogenic PCR (TaqMan) assay. Appl. Environ. Microbiol. 66 (2000) 2853-2858
13. Weller S., Simpkins S., Stead D., Kurdziel A., Hird H., and Weekes R. Identification of Agrobacterium spp. present within Brassica napus seed by TaqMan PCR-implications for GM screening procedures. Arch. Microbiol. 178 (2002) 338-343
14. Weller S., and Stead D. Detection of root mat associated Agrobacterium strains from plant material and other sample types by post-enrichment TaqMan PCR. J. Appl. Microbiol. 92 (2002) 118-126
15. Wisler G., Duffus J., Liu H., and Li R. Ecology and epidemeology of whitefly-transmitted closteroviruses. Plant Dis. 82 (1998) 270-279