Detection of root mat associated Agrobacterium strains from plant material and other sample types by post-enrichment TaqMan PCR

Journal of Applied Microbiology

Volumn 92, Issue 1, 2002, Pages 118-126

  Weller, S A ^a   Stead, D E ^a  

^a DEFRA   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

COST EFFECTIVENESS; ELECTROPHORESIS; POLYMERASE CHAIN REACTION; STRAIN;

AGROBACTERIA; DNA EXTRACTION; EXTRACTION PROCEDURE; FLUOROGENICS; PCR ASSAY; PLANT MATERIAL; PRIMER SETS; PROCESSING TECHNIQUE; SELECTIVE MEDIUM; TAQMAN PROBES;

PATHOGENS;

DNA; NUCLEASE; PRIMER DNA;

BACTERIUM; IDENTIFICATION METHOD; POLYMERASE CHAIN REACTION;

ANALYTIC METHOD; ARTICLE; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATION; CONTROLLED STUDY; COST EFFECTIVENESS ANALYSIS; CULTURE MEDIUM; DNA EXTRACTION; DNA PROBE; DNA SEQUENCE; GEL ELECTROPHORESIS; MODEL; NONHUMAN; PLANT DISEASE; PLANT ROOT; PLASMID; POLYMERASE CHAIN REACTION; RHIZOBIUM;

AGROBACTERIUM; BACTERIA (MICROORGANISMS); NEGIBACTERIA; UNIDENTIFIED BACTERIOPHAGE;

EID: 0036193178     PISSN: 13645072     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-2672.2002.01506.x     Document Type: Article

References (18)

1. The growth of Rhizobium in synthetic media
2. Isolation of different Agrobacterium biovars from a natural oak savannah and tallgrass prairie
3. Selective Media for three biovars of Agrobacterium
4. Sensitivity of different methods for the detection of Ralstonia solanacearum
5. Universal PCR primers for detection of phytopathogenic Agrobacterium strains
6. Detection of specific polymerase chain reaction product by utilising the 5′ so 3′ exonuclease activity of Thermus aquaticus DNA polymerase
7. Allelic discrimination by nick-translation PCR with fluorogenic probes
8. Novel telluriteamended media and specific chromosomal and Ti plasmid probes for direct analysis of soil populations of Agrobacterium biovars 1 and 2
9. Detection of Pseudomonas savastanoi pv. savastanoi in olive plants by enrichment and PCR
10. Detection of Clavibacter michiganensis subsp. sepedonicus in potato tubers by BIO-PCR and an automated real time fluorescence detection system
11. Isolation of Agrobacterium tumefaciens-A. radiobacter group from the soil
12. rol Genes of Agrobacterium rhizogenes cucumopine strain: Sequence, effects and pattern of expression
13. Evaluation of a commercial microbial identification system based on fatty acid profiles for rapid, accurate identification of plant pathogenic bacteria
14. Rhizogenic Agrobacterium biovar 1 strains and cucumber root mat in the UK
15. Root mat of tomato caused by rhizogenic strains of Agrobacterium biovar 1 in the UK
16. Detection of Ralstonia solanacearum strains using a quantitative, multiplex, real-time, fluorogenic PCR (TaqMan) assay
17. Detection of Ralstonia solanacearum from potato tissue by post enriched TaqMan™ PCR
18. A revision of Rhizobium Frank 1889, with an emended description of the genus, and the inclusion of all species of Agrobacterium Conn 1942 and Allorhizobium undicola de Lajudie et al. 1998 as new combinations: Rhizobium radiobacter, R. rhizogenes, R. rubi, R. undicola and R. vitis