One-step multiplex RT-PCR assay for the detection of Peste des petits ruminants virus in clinical samples

Veterinary Research Communications

Volumn 30, Issue 6, 2006, Pages 655-666

  Balamurugan, V ^a   Sen, A ^a   Saravanan, P ^a   Singh, R P ^a   Singh, R K ^a   Rasool, T J ^a   Bandyopadhyay, S K ^b  

^a INDIAN VETERINARY RESEARCH INSTITUTE   (India)

^b Ministry of Agriculture   (India)

Author keywords

Clinical samples; Differentiation RPV; One step multiplex RT PCR; Peste des petits ruminants virus

Indexed keywords

RNA DIRECTED DNA POLYMERASE; TAQ POLYMERASE; VIRUS PROTEIN; VIRUS RNA;

AGAR GEL ELECTROPHORESIS; ANIMAL CELL; ANIMAL DISEASE; ANIMAL EXPERIMENT; ARTICLE; CATTLE PLAGUE VIRUS; CONTROLLED STUDY; ENZYME LINKED IMMUNOSORBENT ASSAY; EYE BIOPSY; GENE AMPLIFICATION; GOAT DISEASE; INTERMETHOD COMPARISON; MEASLES VIRUS; NONHUMAN; NOSE SMEAR; ORAL BIOPSY; POLYMERASE CHAIN REACTION; RESTRICTION MAPPING; REVERSE TRANSCRIPTION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA PURIFICATION; SENSITIVITY ANALYSIS; STANDARDIZATION; TIME; VIRUS DETECTION; VIRUS IDENTIFICATION;

ANIMALS; CERCOPITHECUS AETHIOPS; DIAGNOSIS, DIFFERENTIAL; GENE AMPLIFICATION; GOAT DISEASES; GOATS; MOLECULAR WEIGHT; PESTE-DES-PETITS-RUMINANTS; PESTE-DES-PETITS-RUMINANTS VIRUS; REPRODUCIBILITY OF RESULTS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RINDERPEST; RINDERPEST VIRUS; RNA, VIRAL; SENSITIVITY AND SPECIFICITY; TIME FACTORS; VERO CELLS;

CAPRA HIRCUS; PESTE-DES-PETITS-RUMINANTS VIRUS; REINDEER PAPILLOMAVIRUS; RINDERPEST VIRUS;

EID: 33745938067     PISSN: 01657380     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11259-006-3331-3     Document Type: Article

References (44)

1. Abu-Elzein, E.M.E., Hassanien, M.M., Al-Afaleq AI, Abd-Elhadi, M.A. and Housain, F.M.I., 1990. Isolation of peste des petits ruminants virus from goats in Saudi Arabia. The Veterinary Record, 127, 309-310
2. Aleyas, A.G., 2002. Comparative evaluation of different gene targets for PCR diagnosis of peste des petits ruminants, (MVSc thesis, Indian Veterinary Research Insititute, Deemed University, Izatnagar)
3. Andreoletti, L., Hober, D., Belaich, S., Lobert, P.E., Dewilde, A. and Wattre, P., 1996. Rapid detection of entero virus in the clinical specimens using PCR and microwell capture hybridization assay. Journal of Virological Methods, 62, 1-10
4. Barlic-Maganja, D. and Grom, S., 2001. Highly sensitive one tube RT-PCR and microplate hybridization assay for the detection and for the discrimination of classical swine fever virus from other pestiviruses. Journal of Virological Methods, 95, 101-110
5. Brindha, K., Raj, G.D., Ganesan, P.I., Thiagarajan, V., Nainar, A.M. and Nachimuthu, K., 2001. Comparison of virus isolation and polymerase chain reaction for diagnosis of peste des petits ruminants. Acta Virologica, 45, 169-172
6. Callens, M. and Clercq, K., 1999. Highly sensitive detection of swine vesicular disease virus based on a single tube RT-PCR system and DIG-ELISA detection. Journal of Virological Methods, 77, 87-99
7. Cattaneo, R., Rebmann, G., Baczko, K., Ter Meulen, V. and Billeter, M.A., 1987. Altered ratios of measles virus transcripts in diseased human brains. Virology, 160, 523-526
8. Chomczynski, P. and Sacchi, N., 1987. Single step method of RNA isolation by acid guanidium thiocyanate-phenol-chloroform extraction. Analytical Biochemistry, 162, 56-159
9. Couacy-Hymann, E., Roger, F., Hurard, C., Guillou, J.P., Libeau, G. and Diallo, A., 2002. Rapid and sensitive detection of peste des petits ruminants virus by a polymerase chain reaction assay. Journal of Virological Methods, 100, 17-25
10. Devireddy, L.R., Raghavan, R., Ramachandran, S. and Shaila, M.S., 1998. Protection of rabbits against lapinised rinderpest virus with purified envelope glyproteins of peste des petits ruminants viruses. Acta Virologica, 42, 299-306
11. Dhar, P., Sreenivasa, B.P., Barrett, T., Corteyn, M., Singh, R.P. and Bandyopadhyay, S.K., 2002. Recent epidemilogy of peste des petits ruminants virus (PPRV). Veterinary Microbiology, 88, 153-159
12. Diallo, A., 1990. Morbillivirus group: Genome organization and proteins. Veterinary Microbiology, 23, 155-163
13. Diallo, A., Barrett, T., Barbron, M., Shaila, M.S. and Lefevre, P.C., 1989. Differentiation of rinderpest and peste des petits ruminants viruses using specific cDNA clones. Journal of Virological Methods, 23, 127-136
14. Diallo, A., Barrett, T., Barbron, M., Meyer, G. and Lefevre, P.C., 1994. Cloning of the nucleocapsid protein gene of peste des petits ruminants virus: Relationship to other morbiliviruses. Journal of General Virology, 75, 233-237
15. Diallo, A., Libeau, G., Couacy-Hymann, E. and Barbron, M., 1995. Recent developments in the diagnosis of rinderpest and peste des petits ruminants. Veterinary Microbiology, 44, 307-317
16. Forsyth, M.A. and Barrett, T., 1995. Detection and differentiation of rinderpest and peste des petits ruminants viruses in diagnostic and experimental samples by polymerase chain reaction using P and F gene-specific primers. Virus Research, 39, 151-163
17. Forsyth, M.A., Parida, S., Alexandersen, S., Belsham, G.J. and Barrett, T., 2003. Rinderpest virus lineage differentiation using RT-PCR and SNAP-ELISA. Journal of Virological Methods, 107, 29-36
18. Ghosh, A., Joshi, V.P. and Shaila, M.S., 1995. Characterization of an in vitro transcription system from rinderpest virus. Veterinary Microbiology, 44, 165-173
19. Haffar, A., Libeau, G., Moussa, A., Cecile, M. and Diallo, A., 1999. The matrix protein gene sequence analysis reveals close relationship between peste des petits ruminants virus (PPRV) and dolphin morbillivirus. Virus Research, 64, 69-75
20. Harris, E., Roberts, T.G., Smith, L., Selle, J., Kramer, L.D., Valle, S., Sandoval, E. and Balmaseda, A., 1998. Typing of dengue virus in clinical specimens and mosquitoes by single tube multiplex reverse transcriptase PCR. Journal of Clinical Microbiology, 36, 2634-2639
21. Ismail, T.M., Yamanaka, M.K., Saliki, J.T., EL-Kholy, A., Mebus, C. and Yilma, T., 1995. Cloning and expression of the nucleoprotein of peste des petits ruminants virus in baculovirus for use in serological diagnosis. Virology, 20, 776-778
22. Jones, L., Giavedoni, L., Saliki, J.T., Brown, C., Mebus, C. and Yilma, T., 1993. Protection of goats against peste des petits ruminants with a vaccinia virus double recombinant expressing the F and H genes of rinderpest virus. Vaccine, 11, 961-964
23. Kim, Y.H., Cho, K.W., Youn, H.Y., Yoo, H.S. and Han, H.R., 2001. Detection of canine distemper virus (CDV) through one step RT-PCR combined with nested PCR. Journal of Veterinary Science, 2, 59-63
24. Lee, L.H., Ting, L.J., Shein, J.H. and Shein, H.K., 1994. Single tube, non-interrupted reverse transcriptase polymerase chain reaction for detection of infectious bursal disease virus. Journal of Clinical Microbiology, 32, 1268-1272
25. Libeau, G., Diallo, A., Colas, F. and Guerre, L., 1994. Rapid differential diagnosis of rinderpest and peste des petits ruminants using an immunocapture ELISA. The Veterinary Record, 134, 300-304
26. Limo, M. and Yilma, T., 1990. Molecular cloning of the rinderpest virus matrix gene: Comparative sequence analysis with other paramyxoviruses. Virology, 175, 323-327
27. Mallet, F., Oriol, G., Mary, C., Verrier, B. and Mandrand, B., 1995. Continuous RT-PCR using AMV-RT and Taq DNA polymerase: Characterization and comparison to uncoupled procedures. Biotechniques, 18, 678-687
28. Muthuchelvan, D., 2004. Molecular characterization of a candidate peste des petits ruminants vaccine virus, (PhD thesis, Indian Veterinary Research Institute, Deemed University, Izatnagar)
29. Obi, T.U. and Patrick, D., 1984. The detection of peste des petits ruminants (PPR) virus antigen by agar gel precipitation test and counter-immunoelectrophoresis. Journal of Hygiene, 93, 579-586
30. Obi, T.U., McCullough, K.C. and Taylor, W. P., 1990. The production of peste des petits ruminants hyperimmune sera in rabbits and their application in virus diagnosis. Journal of Veterinary Medicine, 37, 345-352
31. Pandey, K.D., Baron, M.D. and Barrett, T., 1992. Differential diagnosis of rinderpest and PPR using biotinylated cDNA probes. The Veterinary Record, 131, 199-200
32. Plowright, W. and Ferris, R.D., 1962. Studies with rinderpest virus in tissue culture. The use of attenuated culture virus as a vaccine for cattle. Research in Veterinary Science, 3, 172-182
33. Saravanan, P., Singh, R.P., Balamurugan, V., Dhar, P., Sreenivasa, B.P., Muthuchevan, D., Sen, A., Aleyas, A.G., Singh, R.K. and Bandhyopadhyay, S.K., 2004. Development of a N gene based PCR ELISA for detection of PPR virus in clinical samples. Acta Virologica, 48, 249-255
34. Shaila, M.S., Purushothaman, V., Bhavasar, D., Venugopal, K. and Venkatesan, R.A., 1989. Peste des petits ruminants of sheep in India. The Veterinary Record, 125, 602
35. Shaila, M.S., Shamaki, D., Forsyth, M.A., Diallo, A., Groatley, L., Kitching, R.P. and Barrett, T., 1996. Geographic distribution and epidemiology of peste des petits ruminants viruses. Virus Research, 43, 149-153
36. Sharma, B., Norrby, E., Blixenkrone-Moller, M. and Kovamees, J., 1992. The nucleotide and deduced amino acid sequence of the M gene of phocid distemper virus (PDV). The most conserved protein of morbilliviruses shows a uniquely close relationship between PDV and canine distemper virus. Virus Research, 13-25
37. Singh, R.P., Sreenivasa, B.P., Dhar, P., Shah, L.C. and Bandyopadhyay, S.K., 2004a. Development of a monoclonal antibody based competitive ELISA for detection and titration of antibodies to peste des petits ruminants (PPR) virus. Veterinary Microbiology, 98, 3-15
38. Singh, R.P., Sreenivasa, B.P., Dhar, P. and Bandyopadhyay, S.K., 2004b. A sandwich-ELISA for the diagnosis of peste des petits ruminants (PPR) infection in small ruminants using anti-nucleocapsid protein monoclonal antibody. Archives of Virology, 149 2155-2170
39. Sinha, N.K., 1998. Rinderpest in India: The delegate declares the peninsular zone 'provisionally free' from the disease. Disease Information, 11, 61
40. Sreenivasa, B.P., Dhar, P., Singh, R.P. and Bandyopadhyay, S.K., 2000. Evaluation of an indigenously developed homologous live attenuated cell culture vaccine against peste des petits ruminants infection of small ruminants. Proceedings of the XX Annual Conference of Indian Association of Veterinary Microbiologists, Immunologists and Specialists in Infectious Diseases (IAVMI), Pantnagar, Uttaranchal, India, 84
41. Steinhauer, D.A., De La Torre, J.C. and Holland, J.J., 1989. High nucleotide substitution error frequencies in clonal pools of vesicular stomatitis virus. Journal of Virology, 63, 2063-2071
42. Tosh, C., Hemadri, D., Sanyal, A., Pattnaik, B. and Venkataramanan, R., 1997. One tube and one-buffer system of RT-PCR amplification of ID gene of foot-and-mouth disease virus field isolates. Acta Virologica, 41, 153-155
43. Van Regenmortel, M.H.V., Fauquet, C. M. and Bishop, D.H.L., 2000. Virus taxonomy. Seventh Report of the International Committee on Taxonomy of Viruses, (Academic Press, San Diego)
44. Zientara, S., Saileau, C., Moulay, S. and Cruciere, C., 1994. Diagnosis of the African horse sickness virus serotype-4 by a one-tube, one-manipulation RT-PCR reaction from infected organs. Journal of Virological Methods, 46, 179-188