Genetic diversity of Agrobacterium vitis strains, isolated from grapevines and wild grapes in Bulgaria, assessed by cleaved amplified polymorphic sequences analysis of 16S-23S rDNA

Vitis - Journal of Grapevine Research

Volumn 45, Issue 3, 2006, Pages 125-130

  Genov, I ^a   Atanassov, I ^a   Yordanov, Y ^b   Tsvetkov, I ^a   Atanassov, A ^a  

^a AGROBIOINSTITUTE   (Bulgaria)

^b Department of Genetics ^*  (Bulgaria)

Author keywords

16S 23S rDNA; Agrobacterium vitis; Cleaved Amplified Polymorphic Sequences markers; Genetic diversity; Vitis vinifera ssp. silvestris; Wild grapes

Indexed keywords

AGROBACTERIUM VITIS; RHIZOBIUM; VITACEAE; VITIS SP.;

EID: 33745917383     PISSN: 00427500     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (20)

1. ABOLMAATY, A.; VU C.; OLIVER, J.; LEVIN, R.; 2000: Development of a new lysis solution for releasing genomic DNA from bacterial cells for amplification by polymerase chain reaction. Microbios 101, 181-189.
2. ARMSTRONG, J.; GIBBS A.; PEAKALL R.; WEILLER G.; 1994: The RAPDistance Package. Available from: http://life.anu.edu.au/molecular/software/rapd.html
3. ARGUN, N.; MOMOL, M.; MADEN, S.; MOMOL, E.; REID, C.; CELEK, H.; BURR, T.; 2002: Characterisation of Agrobacterium vitis strains isolated from Turkish grape cultivars in the central Anatolia region. Plant Dis. 86, 162-166.
4. BOUZAR, H.; CHILTON, W.; NESME X.; DEASSAUX, Y.; VANDEQUIN, V; PETIT, A.; JONES, J.; HODGE, N.; 1995: A new Agrobacterium strain isolated from aerial tumors on Ficus benjamiana L. Appl. Envir. Microbiol. 61, 65-73.
5. BURR, T.; BAZZI, C.; SULE, S.; OTTEN, L.; 1998: Crown Gall of Grape: Biology of Agrobacterium vitis and the development of disease control strategies. Plant Dis. 82, 1288-1297.
6. BURR, T.; OTTEN L.; 1999: Crown gall of grape: Biology and disease management. Ann. Rev. Phytopathol. 37, 53-80.
7. CANADAY, J.; GERARD, J.; CROUZET, P.; OTTEN, L.; 1992: Organization and functional analysis of three T-DNA's from the vitopine Ti plasmid pTiS4. Mol. Gen. Genet. 235, 292-303.
8. GENOV, I.; ATANASSOV, I.; TSVETKOV, I.; ATANASSOV A; 2006: Isolation and characterization of Agrobacterium strains from grapevines in Bulgarian vineyards and wild grapes, V. vinifera ssp. silvestris. Vitis 45, 97-101.
9. MOMOL, E.; BURR, T.; REID, C.; MOMOL, M.; OTTEN, L.; 1998: Genetic diversity of Agrobacterium vitis as determined by DNA fingerprints of the 5′ end of the 23S rRNA gene and Random Amplified Polymorphic DNA. J. Appl. Microbiol. 85, 685-692.
10. NEI, M.; LI, W.; 1979: Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. 76, 5269-5273.
11. NORMAND, P.; COURNOYER, B.; SIMONET, P.; NAZARET, S.; 1992: Analysis of a ribosomal RNA operon in the actinomycete Frankia. Gene 111, 119-124.
12. OTTEN, L.; DE RUFFRAY, P.; MOMOL, E.; MOMOL, T.; BURR, T.; 1996: Phylogenetic relationships between Agrobacterium vitis isolates and their Ti-plasmids. Mol. Plant-Microbe Interact. 9, 782-786.
13. PONSONNET, C.; NESME, X.; 1994: Identification of Agrobacterium strains by PCR-RFLP analysis of pTi and chromosomal regions. Arch. Microbiol. 161, 300-309.
14. SAITOU, N.; NEI M.; 1987: The neighbour-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4, 406-425.
15. nd Ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
16. SZEGEDI, E.; 2003: Opines in naturally infected crown gall tumors. Vitis 42, 39-41.
17. SZEGEDI, E.; CZAKO, M.; OTTEN, L.; KONCZ, CS.; 1988: Opines in crown gall tumors induced by biotype 3 isolates of Agrobacterium tumefaciens. Physiol. Mol. Plant Pathol. 32, 237-247.
18. SZEGEDI, E.; L.; SULE, S.; BURR, T.; 1999: Agrobacterium vitis strain F2/5 contains tartrate and octopine utilization plasmids which do not encode functions for tumor inhibition on grapevine. J. Phytopathol. 147, 665-669.
19. SZEGEDI, E.; BOTTKA, S.; 2002: Detection of Agrobacterium vitis by polymerase chain reaction in grapevine bleeding sap after isolation on a semiselective medium. Vitis 41, 37-42.
20. SZEGEDI, E.; BOTTKA, S.; MIKULAS, J.; OTTEN, L.; SULE S.; 2005: Characterization of Agrobacterium tumefaciens strains isolated from grapevine. Vitis 44, 49-54.