메뉴 건너뛰기




Volumn 149, Issue 1, 2006, Pages 27-37

Purification of an eight subunit RNA polymerase I complex in Trypanosoma brucei

Author keywords

RNA polymerase I; RPB10; RPB6; RPB8; RPC19; T. brucei

Indexed keywords

COMPLEMENTARY DNA; CYCLINE; DNA DIRECTED RNA POLYMERASE; EPITOPE; GLYCOPROTEIN; MEMBRANE ANTIGEN; RIBOSOME RNA;

EID: 33745813557     PISSN: 01666851     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.molbiopara.2006.02.023     Document Type: Article
Times cited : (32)

References (44)
  • 1
    • 18844462890 scopus 로고    scopus 로고
    • RNA polymerase I transcribes procyclin genes and variant surface glycoprotein gene expression sites in Trypanosoma brucei
    • Günzl A., Bruderer T., Laufer G., et al. RNA polymerase I transcribes procyclin genes and variant surface glycoprotein gene expression sites in Trypanosoma brucei. Eukaryot Cell 2 (2003) 542-551
    • (2003) Eukaryot Cell , vol.2 , pp. 542-551
    • Günzl, A.1    Bruderer, T.2    Laufer, G.3
  • 2
    • 0025994368 scopus 로고
    • Alpha-amanitin-resistant transcription units in trypanosomes: a comparison of promoter sequences for a VSG gene expression site and for the ribosomal RNA genes
    • Zomerdijk J.C., Kieft R., Shiels P.G., and Borst P. Alpha-amanitin-resistant transcription units in trypanosomes: a comparison of promoter sequences for a VSG gene expression site and for the ribosomal RNA genes. Nucleic Acids Res 19 (1991) 5153-5158
    • (1991) Nucleic Acids Res , vol.19 , pp. 5153-5158
    • Zomerdijk, J.C.1    Kieft, R.2    Shiels, P.G.3    Borst, P.4
  • 3
    • 0028122590 scopus 로고
    • The PARP and rRNA promoters of Trypanosoma brucei are composed of dissimilar sequence elements that are functionally interchangeable
    • Janz L., and Clayton C. The PARP and rRNA promoters of Trypanosoma brucei are composed of dissimilar sequence elements that are functionally interchangeable. Mol Cell Biol 14 (1994) 5804-5811
    • (1994) Mol Cell Biol , vol.14 , pp. 5804-5811
    • Janz, L.1    Clayton, C.2
  • 4
    • 0026006395 scopus 로고
    • Anatomy of the PARP gene promoter of Trypanosoma brucei
    • Sherman D.R., Janz L., Hug M., and Clayton C. Anatomy of the PARP gene promoter of Trypanosoma brucei. EMBO J 10 (1991) 3379-3386
    • (1991) EMBO J , vol.10 , pp. 3379-3386
    • Sherman, D.R.1    Janz, L.2    Hug, M.3    Clayton, C.4
  • 5
    • 0026764184 scopus 로고
    • The promoter for the procyclic acidic repetitive protein (PARP) genes of Trypanosoma brucei shares features with RNA polymerase I promoters
    • Brown S.D., Huang J., and Van der Ploeg L.H. The promoter for the procyclic acidic repetitive protein (PARP) genes of Trypanosoma brucei shares features with RNA polymerase I promoters. Mol Cell Biol 12 (1992) 2644-2652
    • (1992) Mol Cell Biol , vol.12 , pp. 2644-2652
    • Brown, S.D.1    Huang, J.2    Van der Ploeg, L.H.3
  • 6
    • 0035092410 scopus 로고    scopus 로고
    • In-vitro competition analysis of procyclin gene and variant surface glycoprotein gene expression site transcription in Trypanosoma brucei
    • Laufer G., and Günzl A. In-vitro competition analysis of procyclin gene and variant surface glycoprotein gene expression site transcription in Trypanosoma brucei. Mol Biochem Parasitol 113 (2001) 55-65
    • (2001) Mol Biochem Parasitol , vol.113 , pp. 55-65
    • Laufer, G.1    Günzl, A.2
  • 7
    • 0029117145 scopus 로고
    • Specific binding of proteins to the noncoding strand of a crucial element of the variant surface glycoprotein, procyclin, and ribosomal promoters of Trypanosoma brucei
    • Vanhamme L., Pays A., Tebabi P., Alexandre S., and Pays E. Specific binding of proteins to the noncoding strand of a crucial element of the variant surface glycoprotein, procyclin, and ribosomal promoters of Trypanosoma brucei. Mol Cell Biol 15 (1995) 5598-5606
    • (1995) Mol Cell Biol , vol.15 , pp. 5598-5606
    • Vanhamme, L.1    Pays, A.2    Tebabi, P.3    Alexandre, S.4    Pays, E.5
  • 8
    • 0029960292 scopus 로고    scopus 로고
    • A detailed mutational analysis of the VSG gene expression site promoter
    • Pham V.P., Qi C.C., and Gottesdiener K.M. A detailed mutational analysis of the VSG gene expression site promoter. Mol Biochem Parasitol 75 (1996) 241-254
    • (1996) Mol Biochem Parasitol , vol.75 , pp. 241-254
    • Pham, V.P.1    Qi, C.C.2    Gottesdiener, K.M.3
  • 9
    • 0037884882 scopus 로고    scopus 로고
    • Ex vivo and in vitro identification of a consensus promoter for VSG genes expressed by metacyclic-stage trypanosomes in the tsetse fly
    • Ginger M.L., Blundell P.A., Lewis A.M., Browitt A., Günzl A., and Barry J.D. Ex vivo and in vitro identification of a consensus promoter for VSG genes expressed by metacyclic-stage trypanosomes in the tsetse fly. Eukaryot Cell 1 (2002) 1000-1009
    • (2002) Eukaryot Cell , vol.1 , pp. 1000-1009
    • Ginger, M.L.1    Blundell, P.A.2    Lewis, A.M.3    Browitt, A.4    Günzl, A.5    Barry, J.D.6
  • 10
    • 1342321593 scopus 로고    scopus 로고
    • Transcription
    • Marr J.J., Nielsen T.W., and Komuniecki R.W. (Eds), Academic Press, London
    • Günzl A. Transcription. In: Marr J.J., Nielsen T.W., and Komuniecki R.W. (Eds). Molecular medical parasitology (2003), Academic Press, London 47-65
    • (2003) Molecular medical parasitology , pp. 47-65
    • Günzl, A.1
  • 11
    • 0035856691 scopus 로고    scopus 로고
    • A pol I transcriptional body associated with VSG mono-allelic expression in Trypanosoma brucei
    • Navarro M., and Gull K. A pol I transcriptional body associated with VSG mono-allelic expression in Trypanosoma brucei. Nature 414 (2001) 759-763
    • (2001) Nature , vol.414 , pp. 759-763
    • Navarro, M.1    Gull, K.2
  • 13
    • 0036753399 scopus 로고    scopus 로고
    • A recombinant RNA polymerase II-like enzyme capable of promoter-specific transcription
    • Werner F., and Weinzierl R.O. A recombinant RNA polymerase II-like enzyme capable of promoter-specific transcription. Mol Cell 10 (2002) 635-646
    • (2002) Mol Cell , vol.10 , pp. 635-646
    • Werner, F.1    Weinzierl, R.O.2
  • 14
    • 0037069389 scopus 로고    scopus 로고
    • The A14-A43 heterodimer subunit in yeast RNA pol I and their relationship to Rpb4-Rpb7 pol II subunits
    • Peyroche G., Levillain E., Siaut M., et al. The A14-A43 heterodimer subunit in yeast RNA pol I and their relationship to Rpb4-Rpb7 pol II subunits. Proc Natl Acad Sci USA 99 (2002) 14670-14675
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 14670-14675
    • Peyroche, G.1    Levillain, E.2    Siaut, M.3
  • 15
    • 0043163795 scopus 로고    scopus 로고
    • Structural and functional homology between the RNAP(I) subunits A14/A43 and the archaeal RNAP subunits E/F
    • Meka H., Daoust G., Arnvig K.B., Werner F., Brick P., and Onesti S. Structural and functional homology between the RNAP(I) subunits A14/A43 and the archaeal RNAP subunits E/F. Nucleic Acids Res 31 (2003) 4391-4400
    • (2003) Nucleic Acids Res , vol.31 , pp. 4391-4400
    • Meka, H.1    Daoust, G.2    Arnvig, K.B.3    Werner, F.4    Brick, P.5    Onesti, S.6
  • 16
    • 28844438742 scopus 로고    scopus 로고
    • An in silico analysis of trypanosomatid RNA polymerases: insights into their unusual transcription
    • Kelly S., Wickstead B., and Gull K. An in silico analysis of trypanosomatid RNA polymerases: insights into their unusual transcription. Biochem Soc Trans 33 (2005) 1435-1437
    • (2005) Biochem Soc Trans , vol.33 , pp. 1435-1437
    • Kelly, S.1    Wickstead, B.2    Gull, K.3
  • 17
    • 12344305492 scopus 로고    scopus 로고
    • Characterization of subunits of the RNA polymerase I complex in Trypanosoma brucei
    • Walgraffe D., Devaux S., Lecordier L., et al. Characterization of subunits of the RNA polymerase I complex in Trypanosoma brucei. Mol Biochem Parasitol 139 (2005) 249-260
    • (2005) Mol Biochem Parasitol , vol.139 , pp. 249-260
    • Walgraffe, D.1    Devaux, S.2    Lecordier, L.3
  • 18
    • 0024976355 scopus 로고
    • Complete sequence of the gene encoding the largest subunit of RNA polymerase I of Trypanosoma brucei
    • Jess W., Hammer A., and Cornelissen A.W. Complete sequence of the gene encoding the largest subunit of RNA polymerase I of Trypanosoma brucei. FEBS Lett 249 (1989) 123-128
    • (1989) FEBS Lett , vol.249 , pp. 123-128
    • Jess, W.1    Hammer, A.2    Cornelissen, A.W.3
  • 19
    • 0024439672 scopus 로고
    • Molecular characterization of the Trypanosoma brucei RNA polymerase I and III largest subunit genes
    • Smith J.L., Levin J.R., and Agabian N. Molecular characterization of the Trypanosoma brucei RNA polymerase I and III largest subunit genes. J Biol Chem 264 (1989) 18091-18099
    • (1989) J Biol Chem , vol.264 , pp. 18091-18099
    • Smith, J.L.1    Levin, J.R.2    Agabian, N.3
  • 20
    • 0037330035 scopus 로고    scopus 로고
    • The second largest subunit of Trypanosoma brucei's multifunctional RNA polymerase I has a unique N-terminal extension domain
    • Schimanski B., Klumpp B., Laufer G., Marhöfer R.J., Selzer P.M., and Günzl A. The second largest subunit of Trypanosoma brucei's multifunctional RNA polymerase I has a unique N-terminal extension domain. Mol Biochem Parasitol 126 (2003) 193-200
    • (2003) Mol Biochem Parasitol , vol.126 , pp. 193-200
    • Schimanski, B.1    Klumpp, B.2    Laufer, G.3    Marhöfer, R.J.4    Selzer, P.M.5    Günzl, A.6
  • 21
    • 27744552907 scopus 로고    scopus 로고
    • Highly efficient tandem affinity purification of trypanosome protein complexes based on a novel epitope combination
    • Schimanski B., Nguyen T.N., and Günzl A. Highly efficient tandem affinity purification of trypanosome protein complexes based on a novel epitope combination. Eukaryot Cell 4 (2005) 1942-1950
    • (2005) Eukaryot Cell , vol.4 , pp. 1942-1950
    • Schimanski, B.1    Nguyen, T.N.2    Günzl, A.3
  • 22
    • 23344448980 scopus 로고    scopus 로고
    • Characterization of a multisubunit transcription factor complex essential for spliced-leader RNA gene transcription in Trypanosoma brucei
    • Schimanski B., Nguyen T.N., and Günzl A. Characterization of a multisubunit transcription factor complex essential for spliced-leader RNA gene transcription in Trypanosoma brucei. Mol Cell Biol 25 (2005) 7303-7313
    • (2005) Mol Cell Biol , vol.25 , pp. 7303-7313
    • Schimanski, B.1    Nguyen, T.N.2    Günzl, A.3
  • 23
    • 0032771331 scopus 로고    scopus 로고
    • In vitro analysis of α-amanitin-resistant transcription from the rRNA, procyclic acidic repetitive protein, and variant surface glycoprotein gene promoters in Trypanosoma brucei
    • Laufer G., Schaaf G., Bollgönn S., and Günzl A. In vitro analysis of α-amanitin-resistant transcription from the rRNA, procyclic acidic repetitive protein, and variant surface glycoprotein gene promoters in Trypanosoma brucei. Mol Cell Biol 19 (1999) 5466-5473
    • (1999) Mol Cell Biol , vol.19 , pp. 5466-5473
    • Laufer, G.1    Schaaf, G.2    Bollgönn, S.3    Günzl, A.4
  • 24
    • 0034307729 scopus 로고    scopus 로고
    • Determinants for cap trimethylation of the U2 small nuclear RNA are not conserved between Trypanosoma brucei and higher eukaryotic organisms
    • Günzl A., Bindereif A., Ullu E., and Tschudi C. Determinants for cap trimethylation of the U2 small nuclear RNA are not conserved between Trypanosoma brucei and higher eukaryotic organisms. Nucleic Acids Res 28 (2000) 3702-3709
    • (2000) Nucleic Acids Res , vol.28 , pp. 3702-3709
    • Günzl, A.1    Bindereif, A.2    Ullu, E.3    Tschudi, C.4
  • 26
    • 27144534827 scopus 로고    scopus 로고
    • Systematic study of sequence motifs for RNA trans splicing in Trypanosoma brucei
    • Siegel T.N., Tan K.S., and Cross G.A. Systematic study of sequence motifs for RNA trans splicing in Trypanosoma brucei. Mol Cell Biol 25 (2005) 9586-9594
    • (2005) Mol Cell Biol , vol.25 , pp. 9586-9594
    • Siegel, T.N.1    Tan, K.S.2    Cross, G.A.3
  • 27
    • 0023818531 scopus 로고
    • The interaction of a Ca2+-dependent monoclonal antibody with the protein C activation peptide region. Evidence for obligatory Ca2+ binding to both antigen and antibody
    • Stearns D.J., Kurosawa S., Sims P.J., Esmon N.L., and Esmon C.T. The interaction of a Ca2+-dependent monoclonal antibody with the protein C activation peptide region. Evidence for obligatory Ca2+ binding to both antigen and antibody. J Biol Chem 263 (1988) 826-832
    • (1988) J Biol Chem , vol.263 , pp. 826-832
    • Stearns, D.J.1    Kurosawa, S.2    Sims, P.J.3    Esmon, N.L.4    Esmon, C.T.5
  • 28
    • 18244391988 scopus 로고    scopus 로고
    • U1 small nuclear RNP from Trypanosoma brucei: a minimal U1 snRNA with unusual protein components
    • Palfi Z., Schimanski B., Günzl A., Lücke S., and Bindereif A. U1 small nuclear RNP from Trypanosoma brucei: a minimal U1 snRNA with unusual protein components. Nucleic Acids Res 33 (2005) 2493-2503
    • (2005) Nucleic Acids Res , vol.33 , pp. 2493-2503
    • Palfi, Z.1    Schimanski, B.2    Günzl, A.3    Lücke, S.4    Bindereif, A.5
  • 29
    • 10344264971 scopus 로고    scopus 로고
    • Nuclear actin and myosin I are required for RNA polymerase I transcription
    • Philimonenko V.V., Zhao J., Iben S., et al. Nuclear actin and myosin I are required for RNA polymerase I transcription. Nat Cell Biol 6 (2004) 1165-1172
    • (2004) Nat Cell Biol , vol.6 , pp. 1165-1172
    • Philimonenko, V.V.1    Zhao, J.2    Iben, S.3
  • 30
    • 0017581888 scopus 로고
    • Isolation of ribonucleic acid polymerases I, II, and III from Saccharomyces cerevisiae
    • Hager G.L., Holland M.J., and Rutter W.J. Isolation of ribonucleic acid polymerases I, II, and III from Saccharomyces cerevisiae. Biochemistry 16 (1977) 1-8
    • (1977) Biochemistry , vol.16 , pp. 1-8
    • Hager, G.L.1    Holland, M.J.2    Rutter, W.J.3
  • 31
    • 0025272192 scopus 로고
    • RNA polymerase II subunit composition, stoichiometry, and phosphorylation
    • Kolodziej P.A., Woychik N., Liao S.M., and Young R.A. RNA polymerase II subunit composition, stoichiometry, and phosphorylation. Mol Cell Biol 10 (1990) 1915-1920
    • (1990) Mol Cell Biol , vol.10 , pp. 1915-1920
    • Kolodziej, P.A.1    Woychik, N.2    Liao, S.M.3    Young, R.A.4
  • 32
    • 0033046084 scopus 로고    scopus 로고
    • A serine residue in the N-terminal acidic region of rat RPB6, one of the common subunits of RNA polymerases, is exclusively phosphorylated by casein kinase II in vitro
    • Kayukawa K., Makino Y., Yogosawa S., and Tamura T.K. A serine residue in the N-terminal acidic region of rat RPB6, one of the common subunits of RNA polymerases, is exclusively phosphorylated by casein kinase II in vitro. Gene 234 (1999) 139-147
    • (1999) Gene , vol.234 , pp. 139-147
    • Kayukawa, K.1    Makino, Y.2    Yogosawa, S.3    Tamura, T.K.4
  • 33
    • 16044367245 scopus 로고    scopus 로고
    • Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii
    • Bult C.J., White O., Olsen G.J., et al. Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii. Science 273 (1996) 1058-1073
    • (1996) Science , vol.273 , pp. 1058-1073
    • Bult, C.J.1    White, O.2    Olsen, G.J.3
  • 34
    • 0035970037 scopus 로고    scopus 로고
    • Bacterial RNA polymerase subunit omega and eukaryotic RNA polymerase subunit RPB6 are sequence, structural, and functional homologs and promote RNA polymerase assembly
    • Minakhin L., Bhagat S., Brunning A., et al. Bacterial RNA polymerase subunit omega and eukaryotic RNA polymerase subunit RPB6 are sequence, structural, and functional homologs and promote RNA polymerase assembly. Proc Natl Acad Sci USA 98 (2001) 892-897
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 892-897
    • Minakhin, L.1    Bhagat, S.2    Brunning, A.3
  • 35
    • 0017076829 scopus 로고
    • The 24,000 dalton subunit and the activity of yeast RNA polymerises
    • Valenzuela P., Bell G.I., and Rutter W.J. The 24,000 dalton subunit and the activity of yeast RNA polymerises. Biochem Biophys Res Commun 71 (1976) 26-31
    • (1976) Biochem Biophys Res Commun , vol.71 , pp. 26-31
    • Valenzuela, P.1    Bell, G.I.2    Rutter, W.J.3
  • 36
  • 37
    • 0034326829 scopus 로고    scopus 로고
    • Archaeal RNA polymerase subunits F and P are bona fide homologs of eukaryotic RPB4 and RPB12
    • Werner F., Eloranta J.J., and Weinzierl R.O. Archaeal RNA polymerase subunits F and P are bona fide homologs of eukaryotic RPB4 and RPB12. Nucleic Acids Res 28 (2000) 4299-4305
    • (2000) Nucleic Acids Res , vol.28 , pp. 4299-4305
    • Werner, F.1    Eloranta, J.J.2    Weinzierl, R.O.3
  • 38
    • 0032126616 scopus 로고    scopus 로고
    • A specialized form of RNA polymerase I, essential for initiation and growth-dependent regulation of rRNA synthesis, is disrupted during transcription
    • Milkereit P., and Tschochner H. A specialized form of RNA polymerase I, essential for initiation and growth-dependent regulation of rRNA synthesis, is disrupted during transcription. EMBO J 17 (1998) 3692-3703
    • (1998) EMBO J , vol.17 , pp. 3692-3703
    • Milkereit, P.1    Tschochner, H.2
  • 39
    • 0034252226 scopus 로고    scopus 로고
    • TIF-IA, the factor mediating growth-dependent control of ribosomal RNA synthesis, is the mammalian homolog of yeast Rrn3p
    • Bodem J., Dobreva G., Hoffmann-Rohrer U., et al. TIF-IA, the factor mediating growth-dependent control of ribosomal RNA synthesis, is the mammalian homolog of yeast Rrn3p. EMBO Rep 1 (2000) 171-175
    • (2000) EMBO Rep , vol.1 , pp. 171-175
    • Bodem, J.1    Dobreva, G.2    Hoffmann-Rohrer, U.3
  • 40
    • 0034712932 scopus 로고    scopus 로고
    • RNA polymerase I transcription factor Rrn3 is functionally conserved between yeast and human
    • Moorefield B., Greene E.A., and Reeder R.H. RNA polymerase I transcription factor Rrn3 is functionally conserved between yeast and human. Proc Natl Acad Sci USA 97 (2000) 4724-4729
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 4724-4729
    • Moorefield, B.1    Greene, E.A.2    Reeder, R.H.3
  • 41
    • 0029014760 scopus 로고
    • The association of three subunits with yeast RNA polymerase is stabilized by A14
    • Smid A., Riva M., Bouet F., Sentenac A., and Carles C. The association of three subunits with yeast RNA polymerase is stabilized by A14. J Biol Chem 270 (1995) 13534-13540
    • (1995) J Biol Chem , vol.270 , pp. 13534-13540
    • Smid, A.1    Riva, M.2    Bouet, F.3    Sentenac, A.4    Carles, C.5
  • 42
    • 0034675857 scopus 로고    scopus 로고
    • The recruitment of RNA polymerase I on rDNA is mediated by the interaction of the A43 subunit with Rrn3
    • Peyroche G., Milkereit P., Bischler N., et al. The recruitment of RNA polymerase I on rDNA is mediated by the interaction of the A43 subunit with Rrn3. EMBO J 19 (2000) 5473-5482
    • (2000) EMBO J , vol.19 , pp. 5473-5482
    • Peyroche, G.1    Milkereit, P.2    Bischler, N.3
  • 43
    • 0036866588 scopus 로고    scopus 로고
    • Multiple interactions between RNA polymerase I, TIF-IA and TAFI subunits regulate preinitiation complex assembly at the ribosomal gene promoter
    • Yuan X., Zhao J., Zentgraf H., Hoffmann-Rohrer U., and Grummt I. Multiple interactions between RNA polymerase I, TIF-IA and TAFI subunits regulate preinitiation complex assembly at the ribosomal gene promoter. EMBO Rep 3 (2002) 1082-1087
    • (2002) EMBO Rep , vol.3 , pp. 1082-1087
    • Yuan, X.1    Zhao, J.2    Zentgraf, H.3    Hoffmann-Rohrer, U.4    Grummt, I.5
  • 44
    • 0042121237 scopus 로고    scopus 로고
    • Multiple sequence alignment with the Clustal series of programs
    • Chenna R., Sugawara H., Koike T., et al. Multiple sequence alignment with the Clustal series of programs. Nucleic Acids Res 31 (2003) 3497-3500
    • (2003) Nucleic Acids Res , vol.31 , pp. 3497-3500
    • Chenna, R.1    Sugawara, H.2    Koike, T.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.