메뉴 건너뛰기




Volumn 3907 LNCS, Issue , 2006, Pages 149-158

Multi-objective evolutionary algorithm for discovering peptide binding motifs

Author keywords

[No Author keywords available]

Indexed keywords

DATA ACQUISITION; DATA STRUCTURES; DRUG PRODUCTS; GENETIC ALGORITHMS; VACCINES;

EID: 33745804025     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/11732242_14     Document Type: Conference Paper
Times cited : (7)

References (26)
  • 1
    • 0036530772 scopus 로고    scopus 로고
    • A fast and elitist multiobjective genetic algorithm
    • Deb, K. et al.: A Fast and Elitist Multiobjective Genetic Algorithm. IEEE Trans. on Evolutionary Computation 6 (2002) 182-197
    • (2002) IEEE Trans. on Evolutionary Computation , vol.6 , pp. 182-197
    • Deb, K.1
  • 2
    • 0033318858 scopus 로고    scopus 로고
    • Multiobjective evolutionary algorithms: A comparative case study and the strength of pareto approach
    • Zitzler, E. et al.: Multiobjective Evolutionary Algorithms: A Comparative Case Study and the Strength of Pareto Approach. IEEE Trans. on Evolutionary Computation 3 (1999) 257-271
    • (1999) IEEE Trans. on Evolutionary Computation , vol.3 , pp. 257-271
    • Zitzler, E.1
  • 3
    • 0034199912 scopus 로고    scopus 로고
    • Approximating the Nondominant front using the Pareto Archived evolution stratergy
    • Knowles, J. D. et al.: Approximating the Nondominant front using the Pareto Archived evolution stratergy. Evolutionary Computation 8 (2000) 49-172
    • (2000) Evolutionary Computation , vol.8 , pp. 49-172
    • Knowles, J.D.1
  • 4
    • 0001953837 scopus 로고
    • Genetic algorithms for multiobjective optimization: Formulation, discussion and generalization
    • S. Forrest, Ed. San Mateo, CA: Morgan Kauffman
    • Fonseca, C. M. et al.: Genetic Algorithms for Multiobjective Optimization: Formulation, discussion and generalization. In Proc. of the fifth Intl. conference on Genetic Algorithms, S. Forrest, Ed. San Mateo, CA: Morgan Kauffman (1993) 416-423
    • (1993) Proc. of the Fifth Intl. Conference on Genetic Algorithms , pp. 416-423
    • Fonseca, C.M.1
  • 5
    • 84867497789 scopus 로고    scopus 로고
    • Comparison of multi-objective genetic algorithms in optimizing Q-law-thrust orbit transfers
    • Lee, S. et al.: Comparison of Multi-Objective Genetic Algorithms in Optimizing Q-Law-Thrust Orbit Transfers. GECCO (2005)
    • (2005) GECCO
    • Lee, S.1
  • 6
    • 0030584805 scopus 로고    scopus 로고
    • g7) mice share an amino acid motif
    • g7) mice share an amino acid motif. J. Immunology 156 (1996) 3000-3008
    • (1996) J. Immunology , vol.156 , pp. 3000-3008
    • Amor, S.1
  • 7
    • 0028217017 scopus 로고
    • Self peptides isolated from MHC glycoproteins of non-obese diabetic mice
    • Reich, E.P. et al.: Self peptides isolated from MHC glycoproteins of non-obese diabetic mice. J. Immunology 152 (1994) 2279-2288
    • (1994) J. Immunology , vol.152 , pp. 2279-2288
    • Reich, E.P.1
  • 8
    • 0033388725 scopus 로고    scopus 로고
    • SYFPEITHI:database for MHC ligands and peptide motifs
    • Rammensee, H. et al.: SYFPEITHI:database for MHC ligands and peptide motifs. Immunogenetics 50 (1999) 213-219
    • (1999) Immunogenetics , vol.50 , pp. 213-219
    • Rammensee, H.1
  • 10
    • 0030975684 scopus 로고    scopus 로고
    • g7, the class II major jistocompatibility complex (MHC) molecule of NOD and Biozzi AB/H mice
    • g7, the class II major jistocompatibility complex (MHC) molecule of NOD and Biozzi AB/H mice. J. Exp. Med. 185 (1997) 1013-1021
    • (1997) J. Exp. Med. , vol.185 , pp. 1013-1021
    • Harrison, L.C.1
  • 11
    • 0033662436 scopus 로고    scopus 로고
    • Structural basis of peptide binding and presentation by the type i diabetes-associated MHC class II molecule of NOD mice
    • Latek, R.R. et al.: Structural basis of peptide binding and presentation by the type I diabetes-associated MHC class II molecule of NOD mice. Immunity 12 (2000) 699-710
    • (2000) Immunity , vol.12 , pp. 699-710
    • Latek, R.R.1
  • 12
    • 0034090516 scopus 로고    scopus 로고
    • g7 validated by phage display library
    • g7 validated by phage display library. Int. Immunology 12(4) (2000) 493-503
    • (2000) Int. Immunology , vol.12 , Issue.4 , pp. 493-503
    • Gregori, S.1
  • 13
    • 0034697101 scopus 로고    scopus 로고
    • g7 and autoimmune diabetes
    • g7 and autoimmune diabetes. Science 288 (2000) 505-511
    • (2000) Science , vol.288 , pp. 505-511
    • Corper, A.L.1
  • 14
    • 0033829857 scopus 로고    scopus 로고
    • Binding of conserved islet peptides by human and murine MHC class II molecules associated with susceptibility to type I diabetes
    • Yu, B. et al.: Binding of conserved islet peptides by human and murine MHC class II molecules associated with susceptibility to type I diabetes. J. Immunology 30 (9) 2497-506
    • J. Immunology , vol.30 , Issue.9 , pp. 2497-2506
    • Yu, B.1
  • 15
    • 0036467345 scopus 로고    scopus 로고
    • g7 molecule are unique and determined by the amino acid changes in the P9 pocket
    • g7 Molecule Are Unique and Determined by the Amino Acid Changes in the P9 Pocket. J Immunol 168(3) (2002) 1235-43
    • (2002) J Immunol , vol.168 , Issue.3 , pp. 1235-1243
    • Suri, A.1
  • 16
    • 0034664250 scopus 로고    scopus 로고
    • g7 MHC class II molecule linked to murine diabetes in a promiscuous peptide binder
    • g7 MHC class II molecule linked to murine diabetes in a promiscuous peptide binder. J. Immunology 165 (2000) 3214-3225
    • (2000) J. Immunology , vol.165 , pp. 3214-3225
    • Stratman, T.1
  • 17
    • 33745785328 scopus 로고    scopus 로고
    • Brusic, V. An unpublished dataset
    • Brusic, V. An unpublished dataset
  • 18
    • 0031811850 scopus 로고    scopus 로고
    • MHCPEP, a database of MHC-binding peptides: Update 1997
    • Brusic, V., Rudy,G., Harrison,L.C. MHCPEP, a database of MHC-binding peptides: update 1997. Nucleic Acids Res. 26 (1998) 368-371
    • (1998) Nucleic Acids Res. , vol.26 , pp. 368-371
    • Brusic, V.1    Rudy, G.2    Harrison, L.C.3
  • 19
    • 0029197507 scopus 로고
    • The value of prior knowledge in discovering motifs with MEME
    • Bailey,T.L., Elkan,C. The value of prior knowledge in discovering motifs with MEME. Proc Int Conf Intell Syst Mol Biol. 3 (1995) 21-29
    • (1995) Proc Int Conf Intell Syst Mol Biol. , vol.3 , pp. 21-29
    • Bailey, T.L.1    Elkan, C.2
  • 20
    • 0348047627 scopus 로고    scopus 로고
    • Proteomic signatures: Amino acid and oligopeptide compositions differentiate among phyla
    • Pe'er I. et al. Proteomic Signatures:Amino Acid and Oligopeptide Compositions Differentiate Among Phyla. Proteins 54 (2004) 20-40
    • (2004) Proteins , vol.54 , pp. 20-40
    • Pe'er, I.1
  • 21
    • 33745781236 scopus 로고    scopus 로고
    • http://meme.scdc.edu/meme/website/meme.html
  • 22
    • 0029144601 scopus 로고
    • Gibbs motif sampling: Detection of bacterial outer membrane protein repeats
    • Neuwald, A. F. et al.: Gibbs motif sampling: detection of bacterial outer membrane protein repeats. Protein Science 4 (1995) 1618-32
    • (1995) Protein Science , vol.4 , pp. 1618-1632
    • Neuwald, A.F.1
  • 23
    • 5444249860 scopus 로고    scopus 로고
    • Enhancement to the RANKPEP resource for the prediction of peptide binding to MHC molecules using profiles
    • Reche, P, A. et al.: Enhancement to the RANKPEP resource for the prediction of peptide binding to MHC molecules using profiles. Immunogenetics 56 (2004) 405-419
    • (2004) Immunogenetics , vol.56 , pp. 405-419
    • Reche, P.A.1
  • 24
    • 79959786566 scopus 로고    scopus 로고
    • An updated survey of evolutionary multiobjective optimization techniques: State of the art and future trends
    • Washington: IEEE Service Center
    • Coello, C. A., An Updated Survey of Evolutionary Multiobjective Optimization Techniques: State of the Art and Future Trends. Congress on Evolutionary Computation, Washington: IEEE Service Center (1999) 3-13
    • (1999) Congress on Evolutionary Computation , pp. 3-13
    • Coello, C.A.1
  • 25
    • 0033587774 scopus 로고    scopus 로고
    • g7-peptide binding motifs: Is there a requirement for anchor amino acid side chain
    • g7-peptide binding motifs: Is there a requirement for anchor amino acid side chain. Proc. Natl. Acad. Sci. 96 (1999) 8621-8626
    • (1999) Proc. Natl. Acad. Sci. , vol.96 , pp. 8621-8626
    • Carraso-Marin, E.1    Kanagawa, O.2    Unanue, E.R.3
  • 26
    • 26444471790 scopus 로고    scopus 로고
    • Deriving matrix of peptide interactions in diabetic mouse by genetic algorithm
    • Proc. of 6th International Conference on Intelligent Data Engineering and Automated Learning, Springer
    • Rajapakse, M., et al.: Deriving Matrix of Peptide Interactions in Diabetic Mouse by Genetic Algorithm. Proc. of 6th International Conference on Intelligent Data Engineering and Automated Learning, LNCS, Springer, 3578 (2005) 440-447
    • (2005) LNCS , vol.3578 , pp. 440-447
    • Rajapakse, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.