-
1
-
-
0036376993
-
Statistical methods for identifying differentially expressed genes in replicated cDNA microarray experiments
-
Dudoit, S., Yang, Y.H., Callow, M.J., Speed, T.P.: Statistical methods for identifying differentially expressed genes in replicated cDNA microarray experiments. Statistica Sinica 12 (2002) 111-139
-
(2002)
Statistica Sinica
, vol.12
, pp. 111-139
-
-
Dudoit, S.1
Yang, Y.H.2
Callow, M.J.3
Speed, T.P.4
-
2
-
-
33745784946
-
A new estimate of the proportion unchanged genes in a microarray experiment
-
Broberg, P.: A new estimate of the proportion unchanged genes in a microarray experiment. Genome Biology 5 (2004) P10
-
(2004)
Genome Biology
, vol.5
-
-
Broberg, P.1
-
3
-
-
15844417905
-
A simple procedure for estimating the false discovery rate
-
Dalmasso, C., Broët, P., Moreau, T.: A simple procedure for estimating the false discovery rate. Bioinformatics 21 (2005) 660-668
-
(2005)
Bioinformatics
, vol.21
, pp. 660-668
-
-
Dalmasso, C.1
Broët, P.2
Moreau, T.3
-
4
-
-
8844258766
-
A mixture model for estimating the local false discovery rate in DNA microarray analysis
-
Liao, J., Lin, Y., Selvanayagam, Z.E., Shih, W.J.: A mixture model for estimating the local false discovery rate in DNA microarray analysis. Bioinformatics 20 (2004) 2694-2701
-
(2004)
Bioinformatics
, vol.20
, pp. 2694-2701
-
-
Liao, J.1
Lin, Y.2
Selvanayagam, Z.E.3
Shih, W.J.4
-
5
-
-
1642302777
-
Estimating the number of false null hypothesis when conducting many tests
-
Department of Statistics & Statistical Laboratory, Iowa State University
-
Nettleton, D., Hwang, J.G.: Estimating the number of false null hypothesis when conducting many tests. Technical Report 9, Department of Statistics & Statistical Laboratory, Iowa State University (2003)
-
(2003)
Technical Report
, vol.9
-
-
Nettleton, D.1
Hwang, J.G.2
-
6
-
-
0038156106
-
Estimating the occurrence of false positives and false negatives in microarray studies by approximating and partitioning the empirical distribution of p-values
-
Pounds, S., Morris, S.W.: Estimating the occurrence of false positives and false negatives in microarray studies by approximating and partitioning the empirical distribution of p-values. Bioinformatics 19 (2003) 1236-1242
-
(2003)
Bioinformatics
, vol.19
, pp. 1236-1242
-
-
Pounds, S.1
Morris, S.W.2
-
9
-
-
0038244058
-
Gene expression predictors of breast cancer outcomes
-
Huang, E., Cheng, S., Dressman, H., Pittman, J., Tsou, M., Horng, C., Bild, A., Iversen, E., Liao, M., Chen, C., West, M., Nevins, J., Huang, A.: Gene expression predictors of breast cancer outcomes. Lancet 361 (2003) 1590-1596
-
(2003)
Lancet
, vol.361
, pp. 1590-1596
-
-
Huang, E.1
Cheng, S.2
Dressman, H.3
Pittman, J.4
Tsou, M.5
Horng, C.6
Bild, A.7
Iversen, E.8
Liao, M.9
Chen, C.10
West, M.11
Nevins, J.12
Huang, A.13
-
11
-
-
11244346557
-
Variance stabilization applied to microarray data calibration and to the quantification of differential expression
-
Huber, W., von Heydebreck, A., Sültmann, H., Poustka, A., Vingron, M.: Variance stabilization applied to microarray data calibration and to the quantification of differential expression. Bioinformatics 18 (2002) 96-104
-
(2002)
Bioinformatics
, vol.18
, pp. 96-104
-
-
Huber, W.1
Von Heydebreck, A.2
Sültmann, H.3
Poustka, A.4
Vingron, M.5
-
12
-
-
12344280017
-
Summaries of affymetrix genechip probe level data
-
Irizarry, R., Bolstad, B., Collin, P., Cope, L., Hobbs, B., Speed, T.: Summaries of Affymetrix GeneChip probe level data. Nucleic Acids Research 31 (2003) e15
-
(2003)
Nucleic Acids Research
, vol.31
-
-
Irizarry, R.1
Bolstad, B.2
Collin, P.3
Cope, L.4
Hobbs, B.5
Speed, T.6
-
13
-
-
1542784653
-
Empirical Bayes analysis of a microarray experiment
-
Efron, B., Tibshirani, R., Storey, J.D., Tusher, V.: Empirical Bayes analysis of a microarray experiment. Journal of the American Statistical Society 96 (2001) 1151-1160
-
(2001)
Journal of the American Statistical Society
, vol.96
, pp. 1151-1160
-
-
Efron, B.1
Tibshirani, R.2
Storey, J.D.3
Tusher, V.4
-
14
-
-
84907095419
-
R: A language and environment for statistical computing
-
Vienna, Austria. ISBN 3-900051-07-0
-
R Development Core Team: R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. (2005) ISBN 3-900051-07-0.
-
(2005)
R Foundation for Statistical Computing
-
-
-
15
-
-
28744458859
-
Bioconductor: Open software development for computational biology and bioinformatics
-
Gentleman, R., Carey, V., Bates, D., Bolstad, B., Dettling, M., Dudoit, S., Ellis, B., Gautier, L., Ge, Y., Gentry, J., Hornik, K., Hothorn, T., Huber, W., Iacus, S., Irizarry, R., Leisch, F., Li, C., Maechler, M., Rossini, A., Sawitzki, G., Smith, C., Smyth, G., Tierney, L., Yang, J., Zhang, J.: Bioconductor: Open software development for computational biology and bioinformatics. Genome Biology 5 (2004) R80
-
(2004)
Genome Biology
, vol.5
-
-
Gentleman, R.1
Carey, V.2
Bates, D.3
Bolstad, B.4
Dettling, M.5
Dudoit, S.6
Ellis, B.7
Gautier, L.8
Ge, Y.9
Gentry, J.10
Hornik, K.11
Hothorn, T.12
Huber, W.13
Iacus, S.14
Irizarry, R.15
Leisch, F.16
Li, C.17
Maechler, M.18
Rossini, A.19
Sawitzki, G.20
Smith, C.21
Smyth, G.22
Tierney, L.23
Yang, J.24
Zhang, J.25
more..
-
16
-
-
20844431881
-
Twilight; a Bioconductor package for estimating the local false discovery rate
-
Scheid, S., Spang, R.: twilight; a Bioconductor package for estimating the local false discovery rate. Bioinformatics 21 (2005) 2921-2922
-
(2005)
Bioinformatics
, vol.21
, pp. 2921-2922
-
-
Scheid, S.1
Spang, R.2
-
17
-
-
33745785753
-
Estimation of local false discovery rate - User's guide to the bioconductor package twilight
-
Computational Diagnostics Group, Max Planck Institute for Molecular Genetics, Berlin, Germany
-
Scheid, S., Spang, R.: Estimation of local false discovery rate - User's guide to the Bioconductor package twilight. CompDiag Technical Report 1, Computational Diagnostics Group, Max Planck Institute for Molecular Genetics, Berlin, Germany (2004)
-
(2004)
CompDiag Technical Report
, vol.1
-
-
Scheid, S.1
Spang, R.2
-
18
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini, Y., Hochberg, Y.: Controlling the false discovery rate: A practical and powerful approach to multiple testing. Journal of the Royal Statistical Society: Series B 57 (1995) 289-300
-
(1995)
Journal of the Royal Statistical Society: Series B
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
19
-
-
0345822598
-
The positive false discovery rate: A Bayesian interpretation and the q-value
-
Storey, J.D.: The positive false discovery rate: A Bayesian interpretation and the q-value. Annals of Statistics 31 (2003) 2013-2035
-
(2003)
Annals of Statistics
, vol.31
, pp. 2013-2035
-
-
Storey, J.D.1
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