메뉴 건너뛰기




Volumn 66, Issue 12, 2006, Pages 6118-6128

Genome-wide profiling of CpG methylation identifies novel targets of aberrant hypermethylation in myeloid leukemia

Author keywords

[No Author keywords available]

Indexed keywords

DNA FRAGMENT; METHYL CPG BINDING PROTEIN; RECOMBINANT ANTIBODY;

EID: 33745700202     PISSN: 00085472     EISSN: None     Source Type: Journal    
DOI: 10.1158/0008-5472.CAN-06-0376     Document Type: Article
Times cited : (163)

References (40)
  • 2
    • 18544364773 scopus 로고    scopus 로고
    • Cancer epigenetics and methylation
    • Esteller M, Fraga MF, Paz MF, et al. Cancer epigenetics and methylation. Science 2002;297:1807-8.
    • (2002) Science , vol.297 , pp. 1807-1808
    • Esteller, M.1    Fraga, M.F.2    Paz, M.F.3
  • 3
    • 0033119780 scopus 로고    scopus 로고
    • DNA methylation and chromatin modification
    • Ng HH, Bird A. DNA methylation and chromatin modification. Curr Opin Genet Dev 1999;9:158-63.
    • (1999) Curr Opin Genet Dev , vol.9 , pp. 158-163
    • Ng, H.H.1    Bird, A.2
  • 4
    • 0032168678 scopus 로고    scopus 로고
    • CpG methylation, chromatin structure, and gene silencing-a three-way connection
    • Razin A. CpG methylation, chromatin structure, and gene silencing-a three-way connection. EMBO J 1998;17:4905-8.
    • (1998) EMBO J , vol.17 , pp. 4905-4908
    • Razin, A.1
  • 5
    • 22844457491 scopus 로고    scopus 로고
    • DNA methylation and human disease
    • Robertson KD. DNA methylation and human disease. Nat Rev Genet 2005;6:597-610.
    • (2005) Nat Rev Genet , vol.6 , pp. 597-610
    • Robertson, K.D.1
  • 6
    • 0345357773 scopus 로고    scopus 로고
    • Gene silencing in cancer in association with promoter hypermethylation
    • Herman JG, Baylin SB. Gene silencing in cancer in association with promoter hypermethylation. N Engl J Med 2003;349:2042-54.
    • (2003) N Engl J Med , vol.349 , pp. 2042-2054
    • Herman, J.G.1    Baylin, S.B.2
  • 7
    • 0242539836 scopus 로고    scopus 로고
    • Cancer epigenetics
    • Momparler RL. Cancer epigenetics. Oncogene 2003;22:6479-83.
    • (2003) Oncogene , vol.22 , pp. 6479-6483
    • Momparler, R.L.1
  • 8
    • 0036798927 scopus 로고    scopus 로고
    • Cancer epigenomics
    • Plass C. Cancer epigenomics. Hum Mol Genet 2002;11:2479-88.
    • (2002) Hum Mol Genet , vol.11 , pp. 2479-2488
    • Plass, C.1
  • 9
    • 0343621494 scopus 로고    scopus 로고
    • Aberrant CpG-island methylation has non-random and tumour-type-specific patterns
    • Costello JF, Fruhwald MC, Smiraglia DJ, et al. Aberrant CpG-island methylation has non-random and tumour-type-specific patterns. Nat Genet 2000;24:132-8.
    • (2000) Nat Genet , vol.24 , pp. 132-138
    • Costello, J.F.1    Fruhwald, M.C.2    Smiraglia, D.J.3
  • 11
    • 13644266447 scopus 로고    scopus 로고
    • Dormant hypermethylated tumour suppressor genes: Questions and answers
    • Esteller M. Dormant hypermethylated tumour suppressor genes: questions and answers. J Pathol 2005;205:172-80.
    • (2005) J Pathol , vol.205 , pp. 172-180
    • Esteller, M.1
  • 12
    • 0037357197 scopus 로고    scopus 로고
    • Epigenetic changes: Potential therapeutic targets
    • Kalebic T. Epigenetic changes: potential therapeutic targets. Ann N Y Acad Sci 2003;983:278-85.
    • (2003) Ann N Y Acad Sci , vol.983 , pp. 278-285
    • Kalebic, T.1
  • 13
    • 0038747956 scopus 로고    scopus 로고
    • Relevance of DNA methylation in the management of cancer
    • Esteller M. Relevance of DNA methylation in the management of cancer. Lancet Oncol 2003;4:351-8.
    • (2003) Lancet Oncol , vol.4 , pp. 351-358
    • Esteller, M.1
  • 14
    • 0042386500 scopus 로고    scopus 로고
    • DNA methylation analysis techniques
    • Dahl C, Guldberg P. DNA methylation analysis techniques. Biogerontology 2003;4:233-50.
    • (2003) Biogerontology , vol.4 , pp. 233-250
    • Dahl, C.1    Guldberg, P.2
  • 16
    • 0026546877 scopus 로고
    • A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands
    • Frommer M, McDonald LE, Millar DS, et al. A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands. Proc Natl Acad Sci U S A 1992;89:1827-31.
    • (1992) Proc Natl Acad Sci U S A , vol.89 , pp. 1827-1831
    • Frommer, M.1    McDonald, L.E.2    Millar, D.S.3
  • 17
    • 0036604207 scopus 로고    scopus 로고
    • Transcriptional regulation of the human toll-like receptor 2 gene in monocytes and macrophages
    • Haehnel V, Schwarzfischer L, Fenton MJ, Rehli M. Transcriptional regulation of the human toll-like receptor 2 gene in monocytes and macrophages. J Immunol 2002;168:5629-37.
    • (2002) J Immunol , vol.168 , pp. 5629-5637
    • Haehnel, V.1    Schwarzfischer, L.2    Fenton, M.J.3    Rehli, M.4
  • 18
    • 0028340280 scopus 로고
    • Purification of CpG islands using a methylated DNA binding column
    • Cross SH, Charlton JA, Nan X, Bird AP. Purification of CpG islands using a methylated DNA binding column. Nat Genet 1994;6:236-44.
    • (1994) Nat Genet , vol.6 , pp. 236-244
    • Cross, S.H.1    Charlton, J.A.2    Nan, X.3    Bird, A.P.4
  • 19
    • 0031051145 scopus 로고    scopus 로고
    • Imprinted segments in the human genome: Different DNA methylation patterns in the Prader-Willi/Angelman syndrome region as determined by the genomic sequencing method
    • Zeschnigk M, Schmitz B, Dittrich B, Buiting K, Horsthemke B, Doerfler W. Imprinted segments in the human genome: different DNA methylation patterns in the Prader-Willi/Angelman syndrome region as determined by the genomic sequencing method. Hum Mol Genet 1997;6:387-95.
    • (1997) Hum Mol Genet , vol.6 , pp. 387-395
    • Zeschnigk, M.1    Schmitz, B.2    Dittrich, B.3    Buiting, K.4    Horsthemke, B.5    Doerfler, W.6
  • 20
    • 0348149013 scopus 로고    scopus 로고
    • Epigenetic inactivation of INK4/CDK/RB cell cycle pathway in acute leukemias
    • Chim CS, Wong AS, Kwong YL. Epigenetic inactivation of INK4/CDK/RB cell cycle pathway in acute leukemias. Ann Hematol 2003;82:738-42.
    • (2003) Ann Hematol , vol.82 , pp. 738-742
    • Chim, C.S.1    Wong, A.S.2    Kwong, Y.L.3
  • 21
    • 0031735065 scopus 로고    scopus 로고
    • Selective variegated methylation of the p15 CpG island in acute myeloid leukemia
    • Dodge JE, List AF, Futscher BW. Selective variegated methylation of the p15 CpG island in acute myeloid leukemia. Int J Cancer 1998;78:561-7.
    • (1998) Int J Cancer , vol.78 , pp. 561-567
    • Dodge, J.E.1    List, A.F.2    Futscher, B.W.3
  • 22
    • 0034886399 scopus 로고    scopus 로고
    • KG-1 and KG-1a model the p15 CpG island methylation observed in acute myeloid leukemia patients
    • Dodge JE, Munson C, List AF. KG-1 and KG-1a model the p15 CpG island methylation observed in acute myeloid leukemia patients. Leuk Res 2001;25:917-25.
    • (2001) Leuk Res , vol.25 , pp. 917-925
    • Dodge, J.E.1    Munson, C.2    List, A.F.3
  • 23
    • 0030063853 scopus 로고    scopus 로고
    • The estrogen receptor CpG island is methylated in most hematopoietic neoplasms
    • Issa JP, Zehnbauer BA, Civin CI, et al. The estrogen receptor CpG island is methylated in most hematopoietic neoplasms. Cancer Res 1996;56:973-7.
    • (1996) Cancer Res , vol.56 , pp. 973-977
    • Issa, J.P.1    Zehnbauer, B.A.2    Civin, C.I.3
  • 24
    • 0041779528 scopus 로고    scopus 로고
    • Genetic unmasking of epigenetically silenced tumor suppressor genes in colon cancer cells deficient in DNA methyltransferases
    • Paz MF, Wei S, Cigudosa JC, et al. Genetic unmasking of epigenetically silenced tumor suppressor genes in colon cancer cells deficient in DNA methyltransferases. Hum Mol Genet 2003;12:2209-19.
    • (2003) Hum Mol Genet , vol.12 , pp. 2209-2219
    • Paz, M.F.1    Wei, S.2    Cigudosa, J.C.3
  • 25
    • 12144286879 scopus 로고    scopus 로고
    • Hypermethylation of a small CpGuanine-rich region correlates with loss of activator protein-2α expression during progression of breast cancer
    • Douglas DB, Akiyama Y, Carraway H, et al. Hypermethylation of a small CpGuanine-rich region correlates with loss of activator protein-2α expression during progression of breast cancer. Cancer Res 2004;64:1611-20.
    • (2004) Cancer Res , vol.64 , pp. 1611-1620
    • Douglas, D.B.1    Akiyama, Y.2    Carraway, H.3
  • 26
    • 0035022805 scopus 로고    scopus 로고
    • Regulation of CD21 expression by DNA methylation and histone deacetylation
    • Schwab J, Illges H. Regulation of CD21 expression by DNA methylation and histone deacetylation. Int Immunol 2001;13:705-10.
    • (2001) Int Immunol , vol.13 , pp. 705-710
    • Schwab, J.1    Illges, H.2
  • 27
    • 0034935235 scopus 로고    scopus 로고
    • Frequent loss of expression without sequence mutations of the DCC gene in primary gastric cancer
    • Sato K, Tamura G, Tsuchiya T, et al. Frequent loss of expression without sequence mutations of the DCC gene in primary gastric cancer. Br J Cancer 2001;85:199-203.
    • (2001) Br J Cancer , vol.85 , pp. 199-203
    • Sato, K.1    Tamura, G.2    Tsuchiya, T.3
  • 28
    • 0025071834 scopus 로고
    • De novo methylation of the MyoD1 CpG island during the establishment of immortal cell lines
    • Jones PA, Wolkowicz MJ, Rideout WM III, et al. De novo methylation of the MyoD1 CpG island during the establishment of immortal cell lines. Proc Natl Acad Sci U S A 1990;87:6117-21.
    • (1990) Proc Natl Acad Sci U S A , vol.87 , pp. 6117-6121
    • Jones, P.A.1    Wolkowicz, M.J.2    Rideout III, W.M.3
  • 29
    • 0037438985 scopus 로고    scopus 로고
    • Promoter hypermethylation of DLC-1, a candidate tumor suppressor gene, in several common human cancers
    • Yuan BZ, Durkin ME, Popescu NC. Promoter hypermethylation of DLC-1, a candidate tumor suppressor gene, in several common human cancers. Cancer Genet Cytogenet 2003;140:113-7.
    • (2003) Cancer Genet Cytogenet , vol.140 , pp. 113-117
    • Yuan, B.Z.1    Durkin, M.E.2    Popescu, N.C.3
  • 30
    • 4844227864 scopus 로고    scopus 로고
    • AKAP12/Gravin is inactivated by epigenetic mechanism in human gastric carcinoma and shows growth suppressor activity
    • Choi MC, Jong HS, Kim TY, et al. AKAP12/Gravin is inactivated by epigenetic mechanism in human gastric carcinoma and shows growth suppressor activity. Oncogene 2004;23:7095-103.
    • (2004) Oncogene , vol.23 , pp. 7095-7103
    • Choi, M.C.1    Jong, H.S.2    Kim, T.Y.3
  • 31
    • 23044514626 scopus 로고    scopus 로고
    • Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells
    • Weber M, Davies JJ, Wittig D, et al. Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells. Nat Genet 2005;37:853-62.
    • (2005) Nat Genet , vol.37 , pp. 853-862
    • Weber, M.1    Davies, J.J.2    Wittig, D.3
  • 33
    • 0037396735 scopus 로고    scopus 로고
    • Identification of novel imprinted genes in a genome-wide screen for maternal methylation
    • Smith RJ, Dean W, Konfortova G, Kelsey G. Identification of novel imprinted genes in a genome-wide screen for maternal methylation. Genome Res 2003;13:558-69.
    • (2003) Genome Res , vol.13 , pp. 558-569
    • Smith, R.J.1    Dean, W.2    Konfortova, G.3    Kelsey, G.4
  • 34
    • 0035577862 scopus 로고    scopus 로고
    • Dissecting complex epigenetic alterations in breast cancer using CpG island microarrays
    • Yan PS, Chen CM, Shi H, et al. Dissecting complex epigenetic alterations in breast cancer using CpG island microarrays. Cancer Res 2001;61:8375-80.
    • (2001) Cancer Res , vol.61 , pp. 8375-8380
    • Yan, P.S.1    Chen, C.M.2    Shi, H.3
  • 35
    • 0035894977 scopus 로고    scopus 로고
    • A novel technique for the identification of CpG islands exhibiting altered methylation patterns (ICEAMP)
    • Brock GJ, Huang TH, Chen CM, Johnson KJ. A novel technique for the identification of CpG islands exhibiting altered methylation patterns (ICEAMP). Nucleic Acids Res 2001;29:E123.
    • (2001) Nucleic Acids Res , vol.29
    • Brock, G.J.1    Huang, T.H.2    Chen, C.M.3    Johnson, K.J.4
  • 36
    • 0033020727 scopus 로고    scopus 로고
    • Isolation of DNA fragments associated with methylated CpG islands in human adenocarcinomas of the lung using a methylated DNA binding column and denaturing gradient gel electrophoresis
    • Shiraishi M, Chuu YH, Sekiya T. Isolation of DNA fragments associated with methylated CpG islands in human adenocarcinomas of the lung using a methylated DNA binding column and denaturing gradient gel electrophoresis. Proc Natl Acad Sci U S A 1999;96:2913-8.
    • (1999) Proc Natl Acad Sci U S A , vol.96 , pp. 2913-2918
    • Shiraishi, M.1    Chuu, Y.H.2    Sekiya, T.3
  • 38
    • 0037444026 scopus 로고    scopus 로고
    • The affinity of different MBD proteins for a specific methylated locus depends on their intrinsic binding properties
    • Fraga MF, Ballestar E, Montoya G, Taysavang P, Wade PA, Esteller M. The affinity of different MBD proteins for a specific methylated locus depends on their intrinsic binding properties. Nucleic Acids Res 2003;31:1765-74.
    • (2003) Nucleic Acids Res , vol.31 , pp. 1765-1774
    • Fraga, M.F.1    Ballestar, E.2    Montoya, G.3    Taysavang, P.4    Wade, P.A.5    Esteller, M.6
  • 39
    • 0035874532 scopus 로고    scopus 로고
    • Novel methylation targets in de novo acute myeloid leukemia with prevalence of chromosome 11 loci
    • Rush LJ, Dai Z, Smiraglia DJ, et al. Novel methylation targets in de novo acute myeloid leukemia with prevalence of chromosome 11 loci. Blood 2001;97:3226-33.
    • (2001) Blood , vol.97 , pp. 3226-3233
    • Rush, L.J.1    Dai, Z.2    Smiraglia, D.J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.