Heterochromatin and rDNA sites in Coffea L. chromosomes revealed by FISH and CMA/DAPI II: C canephora cv. Apoatã, C. salvatrix and C. sessiliflora

Caryologia

Volumn 57, Issue 2, 2004, Pages 138-143

  Lombello, Ricardo A ^a   Pinto Maglio, Cecília A F ^a  

^a INSTITUTO AGRONÔMICO   (Brazil)

Author keywords

Coffea; FISH; Heterochromatin; Karyotype; NOR; RDNA site

Indexed keywords

COFFEA; COFFEA CANEPHORA; COFFEA SALVATRIX; COFFEA SESSILIFLORA;

EID: 33745394823     PISSN: 00087114     EISSN: 21655391     Source Type: Journal    
DOI: 10.1080/00087114.2004.10589383     Document Type: Article

References (32)

1. Barbosa R.L., Pierozzi N.I., Lombello R.A. and Pinto-Maglio C.A., 2001. Caracterizagao citomo-lecular de duas especies de Coffea L.: C. eugenioides e C. canephora. II Simposio de Pesquisa dos Cafes do Brasil, pp. 293-298.
2. Barre P., Layssac M., D’Hont A., Louarn J., Charrier A., Hamon S. and Noirot J., 1998 Relationship between parental chromosomic contribution and nuclear DNA content in the coffee interspecific hybrid C. pseudozanguebarieae x C. liberica var. dew-erei. Theoretical and Applied Genetics, 96: 301-305.
3. Berthaud J. and Charrier A., 1988 Genetic resources of Coffea. In Clarke R.J. and Macrae R. (Eds) Coffee, Vol. 4, pp 1-42, Agronomy. London, Elsevier Applied Science.
4. Bouharmont J., 1959 Recherches sur les affinitės chromosomiques dans le genre Coffea. Bruxeles, In-stitut Nationale pour letude agronomique du Congo Beige 77, p. 94.
5. —, 1963 Somatic chromosomes of some Coffea species. Euphytica, 12: 254-527.
6. Carneiro M.F., 1997 Coffee biotechnology and its application in genetic transformation. Euphytica, 96: 167-172.
7. Cuadrado A. and Jouve N., 1994 Mapping and organization of highly-repeated DNA sequences by means of simultaneous and sequential FISH and C-banding in 6X-triticale. Chromosome Research, 2: 331-338.
8. Dussert S., Chabrillange N., Engelmann F., Anthony F., Louarn J. and Hamon S., 1998 Cryo-preservation of seeds of four coffee species (Coffea arabica, C. costatifructa, C. racemosa and C. sessili-flora): importance of water content on cooling rate. Seed Science Research, 8: 9-15.
9. El-Twab M.H.A. and Kondo K., 2001 Molecular cytogenetic identification of the parental genomes in the intergeneric hybrid between Leucanthemella linearis and Nipponanthemum nipponicum during meiosis and mitosis. Caryologia, 54: 109-114.
10. Gao D., Shmidt T. and Jung C., 2000 Molecular characterization and chromosomal distribution of species-specific repetitive DNA sequences from Beta corolliflora, a wild relative of sugar beet. Genome, 43:1073-1080.
11. Gerlach W.L. and Bedbrook J.R., 1979 Cloning and characterization of ribosomal RNA genes from wheat and barley. Nucleic Acid Research, 7: 1869-1885.
12. Heslop-Harrison J.S., 1991 The molecular cytogenetics of plants. Journal of Cell Science, 100: 15-21.
13. Heslop-Harrison J.S, 2000 Comparative genome organization in plants: from sequences and markers to chromatin and chromosomes. The Plant Cell, 12: 617-635.
14. Heslop-Harrison J.S., Schwarzacher T., Anamtha-wat-Jonsson K., Leitch A.R, Shi M. and Leitch IJ., 1991 In situ hybridization with automated chromosome denaturation. Technique, 3: 109-115.
15. Krug C.A. and Carvalho A., 1951 The genetics of Coffea. Advances in Genetics, 4: 127-158.
16. Lashermes P., Combes M.C., Trouslot P. and Charrier A., 1997 Phylogenetic relationships of cofee-tree species (Coffea L.) as inferred from ITS sequences of nuclear ribosomal DNA. Theoretical and Applied Genetics, 94: 947-955.
17. Lashermes P., Cros J., Combes M.C., Trouslot P., Athony F., Hamon S. and Charrier A., 1996 Inheritance and restriction fragment length polymorphism of chloroplast DNA in the genus Coffea L. Theoretical and Applied Genetics, 93: 626-632.
18. Leitch I.J. and Heslop-Harrison J.S., 1992 Physical mapping of the 18S-5.8S-26S rRNA genes in barley by in situ hybridization. Genome, 35: 1013-1018.
19. Lombello R.A. and Pinto-Maglio C.A.F., 2002 Heterocromatina e sitios de DNAr de 4 especies de Coffea L. evidenciados por CMA/DAPI e FISH. Anais do 48° Congresso Nacional de Genetica, Brasil, abstract 91.
20. Nenno M., Schumann K. and Nagl W., 1994 Detection of rRNA and phaseolin genes on polytene chromosomes of Phaseolus coccineus by fluorescence in situ hybridization after pepsin pretreatment. Genome, 37: 1018-1021.
21. Pendas A.M., Moran P. and Garcia-Vazquez E., 1993 Ribosomal genes are interspersed throughout a heterochromatic arm in Atlantic salmon. Cytogenetics and Cell Genetics, 63: 128-130.
22. Pierozzi N.I., Pinto-Maglio C.A.F. and Cruz N.D., 1999 Characterization of somatic chromosomes of two diploid species of Coffea L. with acetic orcein and C-band techniques. Caryologia, 52: 1-8
23. Pinto-Maglio C.A.F., Barbosa R.L., Cuellar T., Maluf M.P., Pierozzi N.I., Silvarola B. and Orsi C.H., 2001 Chromosome characterization in Coffea arabica L. using cytomolecular techniques. Chromosome Research, 9, Suppl 1, pp. 100.
24. Pinto-Maglio C.A.F. and Cruz N.D., 1987 Pachytene chromosome morphology in Coffea L. I. Nucleolar chromosomes. Caryologia, 40: 7-23.
25. Pinto-Maglio C.A.F. and Cruz N.D, 1998 Pachytene chromosome morphology in Coffea L. II. C. arabica L. complement. Caryologia, 51: 19-35.
26. Pinto-Maglio C.A.F., Cuellar T. and Barbosa R.L., 2000 Aplicaęao de tėcnicas de citogenėtica na cara-cterizaęao dos cromossomos da espėcie Coffea arabica L. I Simposio de Pesquisa dos Cafes do Brasil, pp. 444-446.
27. Powel W., Morgante M., Andre C., Hanafey M., Vogel J., Tingey S. and Rafalsky A., 1996 The comparision ofRFLP’ RAPDAFLP and SSR (microsatellite) markers for germplasm analysis. Molecular Breeding, 2: 225-238.
28. Prakash N.S., Combes M.C., Somanna N. and Lashermes P., 2002 —AFLP analysis of introgres-sion in coffee cultivars (Coffea arabica L.) derived from a natural interspecific hybrid. Euphytica, 124: 265-271.
29. Schmidt T., Schwarzacher T. and Heslop-Harrison J.S. 1994 Physical mapping of rRNA genes by in-situ hybridization and strucutural analysis of 5S rRNA genes and intergenic spacer sequences in sugar beet (Beta vulgaris). Theoretical and Applied Genetics, 88: 629-636.
30. Schweizer D., 1976 Reverse fluorescent chromosome banding with Cromomicin and DAPI. Chromosoma, 58: 307-354.
31. Steiger D.L., Nagai C., Moore P.H., Morden C.W., Osgood R.V. and Ming R., 2002 AFLP analysis of genetic diversity within and among Coffea arabica cultivars. Theoretical and Applied Genetics, 105: 209-215.
32. Wrigley G., 1988 Coffee. Longman Scientific and Technical, Tohn Wilev & Sons, Inc., New York.