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Volumn 88, Issue 1, 2006, Pages 88-95

A BAC clone-based physical map of ovine major histocompatibility complex

Author keywords

Bacterial artificial chromosome; Major histocompatibility complex; Ovine leukocyte antigen; Physical mapping; Sheep

Indexed keywords

ANIMAL EXPERIMENT; ARTICLE; BACTERIAL ARTIFICIAL CHROMOSOME; CONTROLLED STUDY; DNA FINGERPRINTING; GENE SEQUENCE; GENOMICS; MAJOR HISTOCOMPATIBILITY COMPLEX; MALE; MOLECULAR CLONING; MOLECULAR EVOLUTION; MOLECULAR PROBE; NONHUMAN; PRIORITY JOURNAL; SEQUENCE HOMOLOGY; SHEEP;

EID: 33744930589     PISSN: 08887543     EISSN: 10898646     Source Type: Journal    
DOI: 10.1016/j.ygeno.2006.02.006     Document Type: Article
Times cited : (21)

References (53)
  • 1
    • 12944320844 scopus 로고    scopus 로고
    • Comparative genomics of major histocompatibility complexes
    • Kelley J., Walter L., and Trowsdale J. Comparative genomics of major histocompatibility complexes. Immunogenetics 56 (2005) 683-695
    • (2005) Immunogenetics , vol.56 , pp. 683-695
    • Kelley, J.1    Walter, L.2    Trowsdale, J.3
  • 2
    • 0032958440 scopus 로고    scopus 로고
    • Genomics of the major histocompatibility complex: haplotypes, duplication, retroviruses and disease
    • Dawkins R., et al. Genomics of the major histocompatibility complex: haplotypes, duplication, retroviruses and disease. Immunol. Rev. 167 (1999) 275-304
    • (1999) Immunol. Rev. , vol.167 , pp. 275-304
    • Dawkins, R.1
  • 3
    • 0036016258 scopus 로고    scopus 로고
    • HLA class II peptide binding and autoimmunity
    • Gebe J.A., Swanson E., and Kwok W.W. HLA class II peptide binding and autoimmunity. Tissue Antigens 59 (2002) 78-87
    • (2002) Tissue Antigens , vol.59 , pp. 78-87
    • Gebe, J.A.1    Swanson, E.2    Kwok, W.W.3
  • 4
    • 0002256649 scopus 로고    scopus 로고
    • Genes of the MHC class III region and the functions of the proteins they encode
    • Browning M., and McMichael A. (Eds), Bios, Oxford
    • Aguado B., Milnern C.M., and Campbell R.D. Genes of the MHC class III region and the functions of the proteins they encode. In: Browning M., and McMichael A. (Eds). HLA and MHC: Genes, Molecules, and Functions (1996), Bios, Oxford 39-76
    • (1996) HLA and MHC: Genes, Molecules, and Functions , pp. 39-76
    • Aguado, B.1    Milnern, C.M.2    Campbell, R.D.3
  • 5
    • 0344721480 scopus 로고    scopus 로고
    • The MHC Sequencing Consortium, Complete sequence and gene map of a human major histocompatibility complex
    • The MHC Sequencing Consortium, Complete sequence and gene map of a human major histocompatibility complex. Nature 401 (1999) 921-923
    • (1999) Nature , vol.401 , pp. 921-923
  • 6
    • 4444362211 scopus 로고    scopus 로고
    • Genetic divergence of the rhesus macaque major histocompatibility complex
    • Daza-Vamenta R., Glusman G., Rowen L., Guthrie B., and Geraghty D.E. Genetic divergence of the rhesus macaque major histocompatibility complex. Genome Res. 14 (2004) 1501-1515
    • (2004) Genome Res. , vol.14 , pp. 1501-1515
    • Daza-Vamenta, R.1    Glusman, G.2    Rowen, L.3    Guthrie, B.4    Geraghty, D.E.5
  • 7
    • 4444365344 scopus 로고    scopus 로고
    • The genomic sequence and comparative analysis of the rat major histocompatibility complex
    • Hurt P., et al. The genomic sequence and comparative analysis of the rat major histocompatibility complex. Genome Res. 14 (2004) 631-639
    • (2004) Genome Res. , vol.14 , pp. 631-639
    • Hurt, P.1
  • 9
    • 0038271888 scopus 로고    scopus 로고
    • Comparative sequencing of human and chimpanzee MHC class I regions unveils insertions/deletions as the major path to genomic divergence
    • Anzai T., et al. Comparative sequencing of human and chimpanzee MHC class I regions unveils insertions/deletions as the major path to genomic divergence. Proc. Natl. Acad. Sci. USA 100 (2003) 7708-7713
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 7708-7713
    • Anzai, T.1
  • 10
    • 0036171479 scopus 로고    scopus 로고
    • A BAC contig of approximately 400 kb contains the classical class I major histocompatibility complex (MHC) genes of cattle
    • Di Palma F., Archibald S.D., Young J.R., and Ellis S.A. A BAC contig of approximately 400 kb contains the classical class I major histocompatibility complex (MHC) genes of cattle. Eur. J. Immunogenet. 29 (2002) 65-68
    • (2002) Eur. J. Immunogenet. , vol.29 , pp. 65-68
    • Di Palma, F.1    Archibald, S.D.2    Young, J.R.3    Ellis, S.A.4
  • 11
    • 0034772032 scopus 로고    scopus 로고
    • Physical localization and order of genes in the class I region of the bovine MHC
    • McShane R.D., et al. Physical localization and order of genes in the class I region of the bovine MHC. Anim. Genet. 32 (2001) 235-239
    • (2001) Anim. Genet. , vol.32 , pp. 235-239
    • McShane, R.D.1
  • 13
    • 0032761766 scopus 로고    scopus 로고
    • Physical organization of the pig major histocompatibility complex class II region
    • Chardon P., et al. Physical organization of the pig major histocompatibility complex class II region. Immunogenetics 50 (1999) 344-348
    • (1999) Immunogenetics , vol.50 , pp. 344-348
    • Chardon, P.1
  • 14
    • 0034097388 scopus 로고    scopus 로고
    • The porcine major histocompatibility complex and related paralogous regions: a review
    • Chardon P., Renard C., Gaillard C.R., and Vaiman M. The porcine major histocompatibility complex and related paralogous regions: a review. Genet. Sel. Evol. 32 (2000) 109-128
    • (2000) Genet. Sel. Evol. , vol.32 , pp. 109-128
    • Chardon, P.1    Renard, C.2    Gaillard, C.R.3    Vaiman, M.4
  • 15
    • 0034802101 scopus 로고    scopus 로고
    • Sequence of the pig major histocompatibility region containing the classical class I genes
    • Renard C., et al. Sequence of the pig major histocompatibility region containing the classical class I genes. Immunogenetics 53 (2001) 490-500
    • (2001) Immunogenetics , vol.53 , pp. 490-500
    • Renard, C.1
  • 16
    • 0035133144 scopus 로고    scopus 로고
    • Sequence of the swine major histocompatibility complex region containing all non-classical class I genes
    • Chardon P., et al. Sequence of the swine major histocompatibility complex region containing all non-classical class I genes. Tissue Antigens 57 (2001) 55-65
    • (2001) Tissue Antigens , vol.57 , pp. 55-65
    • Chardon, P.1
  • 17
    • 1242269889 scopus 로고    scopus 로고
    • Nucleotide sequencing analysis of the swine 433-kb genomic segment located between the non-classical and classical SLA class I gene clusters
    • Shigenari A., et al. Nucleotide sequencing analysis of the swine 433-kb genomic segment located between the non-classical and classical SLA class I gene clusters. Immunogenetics 55 (2004) 695-705
    • (2004) Immunogenetics , vol.55 , pp. 695-705
    • Shigenari, A.1
  • 18
    • 29144444503 scopus 로고    scopus 로고
    • Genomic sequence analysis of the 238-kb swine segment with a cluster of TRIM and olfactory receptor genes located, but with no class I genes, at the distal end of the SLA class I region
    • Ando A., et al. Genomic sequence analysis of the 238-kb swine segment with a cluster of TRIM and olfactory receptor genes located, but with no class I genes, at the distal end of the SLA class I region. Immunogenetics 57 (2005) 864-873
    • (2005) Immunogenetics , vol.57 , pp. 864-873
    • Ando, A.1
  • 19
    • 12944325300 scopus 로고    scopus 로고
    • The feline major histocompatibility complex is rearranged by an inversion with a breakpoint in the distal class I region
    • Beck T.W., et al. The feline major histocompatibility complex is rearranged by an inversion with a breakpoint in the distal class I region. Immunogenetics 56 (2005) 702-709
    • (2005) Immunogenetics , vol.56 , pp. 702-709
    • Beck, T.W.1
  • 20
    • 0038643459 scopus 로고    scopus 로고
    • Comparative genome organization of human, murine, and feline MHC class II region
    • Yuhki N., et al. Comparative genome organization of human, murine, and feline MHC class II region. Genome Res. 13 (2003) 1169-1179
    • (2003) Genome Res. , vol.13 , pp. 1169-1179
    • Yuhki, N.1
  • 21
    • 0347478283 scopus 로고    scopus 로고
    • Molecular organization of the canine major histocompatibility complex
    • Wagner J.L. Molecular organization of the canine major histocompatibility complex. J. Hered. 94 (2003) 23-26
    • (2003) J. Hered. , vol.94 , pp. 23-26
    • Wagner, J.L.1
  • 22
    • 20144374139 scopus 로고    scopus 로고
    • Sequence of the canine major histocompatibility complex region containing non-classical class I genes
    • Wagner J.L., Palti Y., DiDario D., and Faraco J. Sequence of the canine major histocompatibility complex region containing non-classical class I genes. Tissue Antigens 65 (2005) 549-555
    • (2005) Tissue Antigens , vol.65 , pp. 549-555
    • Wagner, J.L.1    Palti, Y.2    DiDario, D.3    Faraco, J.4
  • 23
    • 10644230919 scopus 로고    scopus 로고
    • Genomic sequence of the class II region of the canine MHC: comparison with the MHC of other mammalian species
    • Debenham S.L., et al. Genomic sequence of the class II region of the canine MHC: comparison with the MHC of other mammalian species. Genomics 85 (2005) 48-59
    • (2005) Genomics , vol.85 , pp. 48-59
    • Debenham, S.L.1
  • 24
    • 1442323766 scopus 로고    scopus 로고
    • An ordered BAC contig map of the equine major histocompatibility complex
    • Gustafson A.L., et al. An ordered BAC contig map of the equine major histocompatibility complex. Cytogenet. Genome Res. 102 (2003) 189-195
    • (2003) Cytogenet. Genome Res. , vol.102 , pp. 189-195
    • Gustafson, A.L.1
  • 25
    • 27744579592 scopus 로고    scopus 로고
    • Genomic characterization of MHC class I genes of the horse
    • Tallmadge R.L., Lear T.L., and Antczak D.F. Genomic characterization of MHC class I genes of the horse. Immunogenetics 57 (2005) 763-774
    • (2005) Immunogenetics , vol.57 , pp. 763-774
    • Tallmadge, R.L.1    Lear, T.L.2    Antczak, D.F.3
  • 26
    • 0024310265 scopus 로고
    • Chromosomal localization of the ovine major histocompatibility complex (OLA) by in situ hybridization
    • Mahdy E.A., Makinen A., Chowdhary B.P., Andersson L., and Gustavsson I. Chromosomal localization of the ovine major histocompatibility complex (OLA) by in situ hybridization. Hereditas 111 (1989) 87-90
    • (1989) Hereditas , vol.111 , pp. 87-90
    • Mahdy, E.A.1    Makinen, A.2    Chowdhary, B.P.3    Andersson, L.4    Gustavsson, I.5
  • 27
    • 0031264425 scopus 로고    scopus 로고
    • Association between alleles of the ovine major histocompatibility complex and resistance to footrot
    • Escayg A.P., Hickford J.G., and Bullock D.W. Association between alleles of the ovine major histocompatibility complex and resistance to footrot. Res. Vet. Sci. 63 (1997) 283-287
    • (1997) Res. Vet. Sci. , vol.63 , pp. 283-287
    • Escayg, A.P.1    Hickford, J.G.2    Bullock, D.W.3
  • 28
    • 0029811473 scopus 로고    scopus 로고
    • Class I and class II major histocompatibility complex alleles are associated with faecal egg counts following natural, predominantly Ostertagia circumcincta infection
    • Buitkamp J., Filmether P., Stear M.J., and Epplen J.T. Class I and class II major histocompatibility complex alleles are associated with faecal egg counts following natural, predominantly Ostertagia circumcincta infection. Parasitol. Res. 82 (1996) 693-696
    • (1996) Parasitol. Res. , vol.82 , pp. 693-696
    • Buitkamp, J.1    Filmether, P.2    Stear, M.J.3    Epplen, J.T.4
  • 29
    • 0037239641 scopus 로고    scopus 로고
    • The influence of ovine MHC class II DRB1 alleles on immune response in bovine leukemia virus infection
    • Konnai S., et al. The influence of ovine MHC class II DRB1 alleles on immune response in bovine leukemia virus infection. Microbiol. Immunol. 47 (2003) 223-232
    • (2003) Microbiol. Immunol. , vol.47 , pp. 223-232
    • Konnai, S.1
  • 30
    • 0025934030 scopus 로고
    • Class II major histocompatibility complex genes of the sheep
    • Deverson E.V., et al. Class II major histocompatibility complex genes of the sheep. Anim. Genet. 22 (1991) 211-225
    • (1991) Anim. Genet. , vol.22 , pp. 211-225
    • Deverson, E.V.1
  • 31
    • 0023116990 scopus 로고
    • Genetic organization of the ovine MHC class II region
    • Scott P.C., Choi C.L., and Brandon M.R. Genetic organization of the ovine MHC class II region. Immunogenetics 25 (1987) 116-122
    • (1987) Immunogenetics , vol.25 , pp. 116-122
    • Scott, P.C.1    Choi, C.L.2    Brandon, M.R.3
  • 33
    • 0032191079 scopus 로고    scopus 로고
    • Allelic variation of ovine MHC class II DQA1 and DQA2 genes
    • Snibson K.J., Maddox J.F., Fabb S.A., and Brandon M.R. Allelic variation of ovine MHC class II DQA1 and DQA2 genes. Anim. Genet. 29 (1998) 356-362
    • (1998) Anim. Genet. , vol.29 , pp. 356-362
    • Snibson, K.J.1    Maddox, J.F.2    Fabb, S.A.3    Brandon, M.R.4
  • 36
    • 3543102097 scopus 로고    scopus 로고
    • A 1463 gene cattle-human comparative map with anchor points defined by human genome sequence coordinates
    • Everts-van der Wind A., et al. A 1463 gene cattle-human comparative map with anchor points defined by human genome sequence coordinates. Genome Res. 14 (2004) 1424-1437
    • (2004) Genome Res. , vol.14 , pp. 1424-1437
    • Everts-van der Wind, A.1
  • 37
    • 0344980384 scopus 로고    scopus 로고
    • Physical assignment of the bovine MHC class IIa and class IIb genes
    • Hess M., et al. Physical assignment of the bovine MHC class IIa and class IIb genes. Cytogenet. Cell Genet. 85 (1999) 244-247
    • (1999) Cytogenet. Cell Genet. , vol.85 , pp. 244-247
    • Hess, M.1
  • 38
    • 0034919163 scopus 로고    scopus 로고
    • An enhanced linkage map of the sheep genome comprising more than 1000 loci
    • Maddox J.F., et al. An enhanced linkage map of the sheep genome comprising more than 1000 loci. Genome Res. 11 (2001) 1275-1289
    • (2001) Genome Res. , vol.11 , pp. 1275-1289
    • Maddox, J.F.1
  • 39
    • 0021127375 scopus 로고
    • MHC homology between various mammalian species at the DNA level: its relevance to MHC evolution
    • Devilee P., Warnaar J.N., and Giphart M.J. MHC homology between various mammalian species at the DNA level: its relevance to MHC evolution. Exp. Clin. Immunogenet. 1 (1984) 90-98
    • (1984) Exp. Clin. Immunogenet. , vol.1 , pp. 90-98
    • Devilee, P.1    Warnaar, J.N.2    Giphart, M.J.3
  • 40
    • 0021968071 scopus 로고
    • Analysis of the sheep MHC using HLA class I, II, and C4 cDNA probes
    • Chardon P., et al. Analysis of the sheep MHC using HLA class I, II, and C4 cDNA probes. Immunogenetics 22 (1985) 349-358
    • (1985) Immunogenetics , vol.22 , pp. 349-358
    • Chardon, P.1
  • 41
    • 0028178308 scopus 로고
    • The DY sub-region of the sheep MHC contains an A/B gene pair
    • Wright H., Ballingall K.T., and Redmond J. The DY sub-region of the sheep MHC contains an A/B gene pair. Immunogenetics 40 (1994) 230-234
    • (1994) Immunogenetics , vol.40 , pp. 230-234
    • Wright, H.1    Ballingall, K.T.2    Redmond, J.3
  • 43
    • 25844442363 scopus 로고    scopus 로고
    • Haplotype characterization of transcribed ovine major histocompatibility complex (MHC) class I genes
    • Miltiadou D., Ballingall K.T., Ellis S.A., Russell G.C., and McKeever D.J. Haplotype characterization of transcribed ovine major histocompatibility complex (MHC) class I genes. Immunogenetics 57 (2005) 499-509
    • (2005) Immunogenetics , vol.57 , pp. 499-509
    • Miltiadou, D.1    Ballingall, K.T.2    Ellis, S.A.3    Russell, G.C.4    McKeever, D.J.5
  • 44
    • 0028484077 scopus 로고
    • Mapping and characterization of the DQ subregion of the ovine MHC
    • Wright H., and Ballingall K.T. Mapping and characterization of the DQ subregion of the ovine MHC. Anim. Genet. 25 (1994) 243-249
    • (1994) Anim. Genet. , vol.25 , pp. 243-249
    • Wright, H.1    Ballingall, K.T.2
  • 45
    • 0028676124 scopus 로고
    • Construction of a large-insert yeast artificial chromosome library from sheep DNA
    • Broom M.F., and Hill D.F. Construction of a large-insert yeast artificial chromosome library from sheep DNA. Mamm. Genome 5 (1994) 817-819
    • (1994) Mamm. Genome , vol.5 , pp. 817-819
    • Broom, M.F.1    Hill, D.F.2
  • 46
    • 0032775987 scopus 로고    scopus 로고
    • Construction and characterization of a sheep BAC library of three genome equivalents
    • Vaiman D., et al. Construction and characterization of a sheep BAC library of three genome equivalents. Mamm. Genome 10 (1999) 585-587
    • (1999) Mamm. Genome , vol.10 , pp. 585-587
    • Vaiman, D.1
  • 47
    • 0032694171 scopus 로고    scopus 로고
    • Construction and characterization of an ovine bacterial artificial chromosome library
    • Gill C.A., Davis S.K., Taylor J.F., Cockett N.E., and Bottema C.D. Construction and characterization of an ovine bacterial artificial chromosome library. Mamm. Genome 10 (1999) 1108-1111
    • (1999) Mamm. Genome , vol.10 , pp. 1108-1111
    • Gill, C.A.1    Davis, S.K.2    Taylor, J.F.3    Cockett, N.E.4    Bottema, C.D.5
  • 48
    • 0030137707 scopus 로고    scopus 로고
    • A detailed physical map of the porcine major histocompatibility complex (MHC) class III region: comparison with human and mouse MHC class III regions
    • Peelman L.J., et al. A detailed physical map of the porcine major histocompatibility complex (MHC) class III region: comparison with human and mouse MHC class III regions. Mamm. Genome 7 (1996) 363-367
    • (1996) Mamm. Genome , vol.7 , pp. 363-367
    • Peelman, L.J.1
  • 49
    • 0033025723 scopus 로고    scopus 로고
    • Evolution of the MHC class I region: the framework hypothesis
    • (T.P. Smith, et al. Directed integration of the physical and genetic linkage maps of swine chromosome 7 reveals that the SLA spans the centromere, Genome Res. 5 (1995) 259-271)
    • Amadou C. Evolution of the MHC class I region: the framework hypothesis. Immunogenetics 49 (1999) 362-367 (T.P. Smith, et al. Directed integration of the physical and genetic linkage maps of swine chromosome 7 reveals that the SLA spans the centromere, Genome Res. 5 (1995) 259-271)
    • (1999) Immunogenetics , vol.49 , pp. 362-367
    • Amadou, C.1
  • 50
    • 0032529138 scopus 로고    scopus 로고
    • An improved approach for construction of bacterial artificial chromosome libraries
    • Osoegawa K., et al. An improved approach for construction of bacterial artificial chromosome libraries. Genomics 52 (1998) 1-8
    • (1998) Genomics , vol.52 , pp. 1-8
    • Osoegawa, K.1
  • 51
    • 0026703169 scopus 로고
    • Cloning and stable maintenance of 300-kilobase-pair fragments of human DNA in Escherichia coli using an F-factor-based vector
    • Shizuya H., et al. Cloning and stable maintenance of 300-kilobase-pair fragments of human DNA in Escherichia coli using an F-factor-based vector. Proc. Natl. Acad. Sci. USA 89 (1992) 8794-8797
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 8794-8797
    • Shizuya, H.1
  • 53
    • 0031263075 scopus 로고    scopus 로고
    • High throughput fingerprint analysis of large-insert clones
    • Marra M.A., et al. High throughput fingerprint analysis of large-insert clones. Genome Res. 7 (1997) 1072-1084
    • (1997) Genome Res. , vol.7 , pp. 1072-1084
    • Marra, M.A.1


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