Activation function 1 of glucocorticoid receptor binds TATA-binding protein in vitro and in vivo

Molecular Endocrinology

Volumn 20, Issue 6, 2006, Pages 1218-1230

  Copik, Alicja J ^a   Webb, M Scott ^a   Miller, Aaron L ^a   Wang, Yongxin ^a   Kumar, Raj ^a   Thompson, E Brad ^a  

^a University of Texas Medical Branch School of Medicine   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GLUCOCORTICOID RECEPTOR; TATA BINDING PROTEIN;

ANIMAL CELL; ARTICLE; CHEMICAL ANALYSIS; CHROMATOGRAPHY; CONTROLLED STUDY; FLUORESCENCE RESONANCE ENERGY TRANSFER; GEL ELECTROPHORESIS; IMAGE ANALYSIS; IN VITRO STUDY; IN VIVO STUDY; MICROCALORIMETRY; NONHUMAN; PRIORITY JOURNAL; PROTEIN INTERACTION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEDIMENTATION RATE; STOICHIOMETRY; THERMODYNAMICS; TITRIMETRY;

ANIMALS; CELL LINE; GENE EXPRESSION REGULATION; HUMANS; KINETICS; MODELS, BIOLOGICAL; MULTIPROTEIN COMPLEXES; PROMOTER REGIONS (GENETICS); PROTEIN BINDING; PROTEIN STRUCTURE, TERTIARY; RECEPTORS, GLUCOCORTICOID; RECOMBINANT PROTEINS; TATA-BOX BINDING PROTEIN; THERMODYNAMICS; TRANSCRIPTION, GENETIC; TRANSFECTION;

EID: 33744492845     PISSN: 08888809     EISSN: 08888809     Source Type: Journal    
DOI: 10.1210/me.2005-0257     Document Type: Article

References (49)

1. Godowski PJ, Rusconi S, Miesfeld R, Yamamoto KR 1987 Glucocorticoid receptor mutants that are constitutive activators of transcriptional enhancement. Nature 325:365-368
2. Evans RM 1988 The steroid and thyroid hormone receptor superfamily. Science 240:889-895
3. Dahlman-Wright K, Almlof T, McEwan IJ, Gustafsson JA, Wright AP 1994 Delineation of a small region within the major transactivation domain of the human glucocorticoid receptor that mediates transactivation of gene expression. Proc Natl Acad Sci USA 91:1619-1623
4. Giguere V, Hollenberg SM, Rosenfeld MG, Evans RM 1986 Functional domains of the human glucocorticoid receptor. Cell 46:645-652
5. Hollenberg SM, Evans RM 1988 Multiple and cooperative trans-activation domains of the human glucocorticoid receptor. Cell 55:899-906
6. Webster NJ, Green S, Jin JR, Chambon P 1988 The hormone-binding domains of the estrogen and glucocorticoid receptors contain an inducible transcription activation function. Cell 54:199-207
7. Dahlman-Wright K, Baumann H, McEwan IJ, Almlof T, Wright AP, Gustafsson JA, Hard T 1995 Structural characterization of a minimal functional transactivation domain from the human glucocorticoid receptor. Proc Natl Acad Sci USA 92:1699-1703
8. Kumar R, Lee JC, Bolen DW, Thompson EB 2001 The conformation of the glucocorticoid receptor AF1/τ1 domain induced by osmolyte binds co-regulatory proteins. J Biol Chem 276:18146-18152
9. Kumar R, Volk DE, Li J, Lee JC, Gorenstein DG, Thompson EB 2004 TATA box binding protein induces structure in the recombinant glucocorticoid receptor AF1 domain. Proc Natl Acad Sci USA 101:16425-16430
10. Dunker AK, Brown CJ, Lawson JD, Iakoucheva LM, Obradovic Z 2002 Intrinsic disorder and protein function. Biochemistry 41:6573-6582
11. Uversky VN 2002 Natively unfolded proteins: a point where biology waits for physics. Protein Sci 11:739-756
12. Ford J, McEwan IJ, Wright AP, Gustafsson JA 1997 Involvement of the transcription factor IID protein complex in gene activation by the N-terminal transactivation domain of the glucocorticoid receptor in vitro. Mol Endocrinol 11:1467-1475
13. Almlof T, Wallberg AE, Gustafsson JA, Wright AP 1998 Role of important hydrophobic amino acids in the interaction between the glucocorticoid receptor τ1-core activation domain and target factors. Biochemistry 37:9586-9594
14. Spolar RS, Record Jr MT 1994 Coupling of local folding to site-specific binding of proteins to DNA. Science 263:777-784
15. Hebbar PB, Archer TK 2003 Chromatin remodeling by nuclear receptors. Chromosoma 111:495-504
16. Medh RD, Webb MS, Miller AL, Johnson BH, Fofanov Y, Li T, Wood TG, Luxon BA, Thompson EB 2003 Gene expression profile of human lymphoid CEM cells sensitive and resistant to glucocorticoid-evoked apoptosis. Genomics 81:543-555
17. Tsai M-J, Clark JH, Schrader WT, O'Malley B 1998 Mechanisms of action of hormones that act as transcription-regulatory factors. In: Wilson JD, Foster DW, Kronenberg HM, Larsen PR, eds. Williams textbook of endocrinology. 9th ed. Philadelphia: W. B. Saunders Co.; 55-95
18. Giguere V 2004 Steroid hormone receptor signaling. In: Bradshaw RA, Dennis EA, eds. Handbook of cell signaling. San Diego: Academic Press; 35-38
19. McEwan IJ, Wright AP, Dahlman-Wright K, Carlstedt-Duke J, Gustafsson JA 1993 Direct interaction of the τ 1 transactivation domain of the human glucocorticoid receptor with the basal transcriptional machinery. Mol Cell Biol 13:399-407
20. Warnmark A, Wikstrom A, Wright AP, Gustafsson JA, Hard T 2001 The N-terminal regions of estrogen receptor α and β are unstructured in vitro and show different TBP binding properties. J Biol Chem 276:45939-45944
21. Shen F, Triezenberg SJ, Hensley P, Porter D, Knutson JR 1996 Transcriptional activation domain of the herpesvirus protein VP16 becomes conformationally constrained upon interaction with basal transcription factors. J Biol Chem 271:4827-4837
22. Nedialkov YA, Triezenberg SJ 2004 Quantitative assessment of in vitro interactions implicates TATA-binding protein as a target of the VP16C transcriptional activation region. Arch Biochem Biophys 425:77-86
23. Hermann S, Berndt KD, Wright AP 2001 How transcriptional activators bind target proteins. J Biol Chem 276:40127-40132
24. Chalepakis G, Schauer M, Cao XA, Beato M 1990 Efficient binding of glucocorticoid receptor to its responsive element requires a dimer and DNA flanking sequences. DNA Cell Biol 9:355-368
25. Hard T, Kellenbach E, Boelens R, Maler BA, Dahlman K, Freedman LP, Carlstedt-Duke J, Yamamoto KR, Gustafsson JA, Kaptein R 1990 Solution structure of the glucocorticoid receptor DNA-binding domain. Science 249:157-160
26. Luisi BF, Xu WX, Otwinowski Z, Freedman LP, Yamamoto KR, Sigler PB 1991 Crystallographic analysis of the interaction of the glucocorticoid receptor with DNA. Nature 352:497-505
27. Juo ZS, Chiu TK, Leiberman PM, Baikalov I, Berk AJ, Dickerson RE 1996 How proteins recognize the TATA box. J Mol Biol 261:239-254
28. Almlof T, Gustafsson JA, Wright AP 1997 Role of hydrophobic amino acid clusters in the transactivation activity of the human glucocorticoid receptor. Mol Cell Biol 17:934-945
29. Dion V, Coulombe B 2003 Interactions of a DNA-bound transcriptional activator with the TBP-TFIIA-TFIIB-promoter quaternary complex. J Biol Chem 278:11495-11501
30. Xu X, Prorock C, Ishikawa H, Maldonado E, Ito Y, Gelinas C 1993 Functional interaction of the v-Rel and c-Rel oncoproteins with the TATA-binding protein and association with transcription factor IIB. Mol Cell Biol 13:6733-6741
31. Kerr LD, Ransone LJ, Wamsley P, Schmitt MJ, Boyer TG, Zhou Q, Berk AJ, Verma IM 1993 Association between proto-oncoprotein Rel and TATA-binding protein mediates transcriptional activation by NF-κB. Nature 365:412-419
32. Cox JM, Hayward MM, Sanchez JF, Gegnas LD, van der Zee S, Dennis JH, Sigler PB, Schepartz A 1997 Bidirectional binding of the TATA box binding protein to the TATA box. Proc Natl Acad Sci USA 94:13475-13480
33. Kays AR, Schepartz A 2002 Gal4-VP16 and Gal4-AH increase the orientational and axial specificity of TATA box recognition by TATA box binding protein. Biochemistry 41:3147-3155
34. Kuras L, Struhl K 1999 Binding of TBP to promoters in vivo is stimulated by activators and requires Pol II holoenzyme. Nature 399:609-613
35. Chatterjee S, Struhl K 1995 Connecting a promoter-bound protein to TBP bypasses the need for a transcriptional activation domain. Nature 374:820-822
36. Klages N, Strubin M 1995 Stimulation of RNA polymerase II transcription initiation by recruitment of TBP in vivo. Nature 374:822-823
37. Klein C, Struhl K 1994 Increased recruitment of TATA-binding protein to the promoter by transcriptional activation domains in vivo. Science 266:280-282
38. Dorris DR, Struhl K 2000 Artificial recruitment of TFIID, but not RNA polymerase II holoenzyme, activates transcription in mammalian cells. Mol Cell Biol 20:4350-4358
39. Muller F, Tora L 2004 The multicoloured world of promoter recognition complexes. EMBO J 23:2-8
40. Ferreira ME, Hermann S, Prochasson P, Workman JL, Berndt KD, Wright AP 2005 Mechanism of transcription factor recruitment by acidic activators. J Biol Chem 280:21779-21784
41. Shoemaker BA, Portman JJ, Wolynes PG 2000 Speeding molecular recognition by using the folding funnel: the fly-casting mechanism. Proc Natl Acad Sci USA 97:8868-8873
42. Li XY, Virbasius A, Zhu X, Green MR 1999 Enhancement of TBP binding by activators and general transcription factors. Nature 399:605-609
43. Majello B, Napolitano G, De Luca P, Lania L 1998 Recruitment of human TBP selectively activates RNA polymerase II TATA-dependent promoters. J Biol Chem 273:16509-16516
44. Kim J, Iyer VR 2004 Global role of TATA box-binding protein recruitment to promoters in mediating gene expression profiles. Mol Cell Biol 24:8104-8112
45. Lee HL, Archer TK 1994 Nucleosome-mediated disruption of transcription factor-chromatin initiation complexes at the mouse mammary tumor virus long terminal repeat in vivo. Mol Cell Biol 14:32-41
46. Kumar R, Baskakov IV, Srinivasan G, Bolen DW, Lee JC, Thompson EB 1999 Interdomain signaling in a two-domain fragment of the human glucocorticoid receptor. J Biol Chem 274:24737-24741
47. Chen H, Srinivasan G, Thompson EB 1997 Protein-protein interactions are implied in glucocorticoid receptor mutant 465*-mediated cell death. J Biol Chem 272:25873-25880
48. Bai Y, Giguere V 2003 Isoform-selective interactions between estrogen receptors and steroid receptor coactivators promoted by estradiol and ErbB-2 signaling in living cells. Mol Endocrinol 17:589-599
49. Karpova TS, Baumann CT, He L, Wu X, Grammer A, Lipsky P, Hager GL, McNally JG 2003 Fluorescence resonance energy transfer from cyan to yellow fluorescent protein detected by acceptor photobleaching using confocal microscopy and a single laser. J Microsc 209:56-70