메뉴 건너뛰기




Volumn 5, Issue 5, 2006, Pages 789-793

Evidence of mRNA-mediated intron loss in the human-pathogenic fungus Cryptococcus neoformans

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA; RNA DIRECTED DNA POLYMERASE;

EID: 33646904207     PISSN: 15359778     EISSN: None     Source Type: Journal    
DOI: 10.1128/EC.5.5.789-793.2006     Document Type: Article
Times cited : (46)

References (36)
  • 1
    • 0001225414 scopus 로고    scopus 로고
    • Systematics and evolution
    • D. J. McLaughlin and E. McLaughlin (ed.). Springer-Verlag, New York, N.Y.
    • Berbee, M. L., and J. W. Taylor. 2000. Systematics and evolution, p. 229-246. In D. J. McLaughlin and E. McLaughlin (ed.), The mycota, vol. VIIB. Springer-Verlag, New York, N.Y.
    • (2000) The Mycota , vol.7 B , pp. 229-246
    • Berbee, M.L.1    Taylor, J.W.2
  • 2
    • 28744447849 scopus 로고    scopus 로고
    • Phylogenetic analyses suggest reverse splicing spread of group 1 introns in fungal ribosomal DNA
    • Bhattacharya, D., V. Reeb, D. M. Simon, and F. Lutzoni. 2005. Phylogenetic analyses suggest reverse splicing spread of group 1 introns in fungal ribosomal DNA. BMC Evol. Biol. 5:68.
    • (2005) BMC Evol. Biol. , vol.5 , pp. 68
    • Bhattacharya, D.1    Reeb, V.2    Simon, D.M.3    Lutzoni, F.4
  • 3
    • 0021799352 scopus 로고
    • Ty elements transpose through an RNA intermediate
    • Boeke, J. D., D. J. Garfinkel, C. A. Styles, and G. R. Fink. 1985. Ty elements transpose through an RNA intermediate. Cell 40:491-500.
    • (1985) Cell , vol.40 , pp. 491-500
    • Boeke, J.D.1    Garfinkel, D.J.2    Styles, C.A.3    Fink, G.R.4
  • 4
    • 0022431014 scopus 로고
    • Selfish DNA and the origin of introns
    • Cavalier-Smith, T. 1985. Selfish DNA and the origin of introns. Nature 315:283-284.
    • (1985) Nature , vol.315 , pp. 283-284
    • Cavalier-Smith, T.1
  • 5
    • 3843113189 scopus 로고    scopus 로고
    • Origins of recently gained introns in Caenorhabditis
    • Coghlan, A., and K. H. Wolfe. 2004. Origins of recently gained introns in Caenorhabditis. Proc. Natl. Acad. Sci. USA 101:11362-11367.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 11362-11367
    • Coghlan, A.1    Wolfe, K.H.2
  • 6
    • 0027446476 scopus 로고
    • A role for reverse transcripts in gene conversion
    • Derr, L. K., and J. N. Strathern. 1993. A role for reverse transcripts in gene conversion. Nature 361:170-173.
    • (1993) Nature , vol.361 , pp. 170-173
    • Derr, L.K.1    Strathern, J.N.2
  • 7
    • 0026014793 scopus 로고
    • RNA-mediated recombination in S. cerevisiae
    • Derr, L. K., J. N. Strathern, and D. J. Garfinkel. 1991. RNA-mediated recombination in S. cerevisiae. Cell 67:355-364.
    • (1991) Cell , vol.67 , pp. 355-364
    • Derr, L.K.1    Strathern, J.N.2    Garfinkel, D.J.3
  • 8
    • 7444237566 scopus 로고    scopus 로고
    • The timing of eukaryotic evolution: Does a relaxed molecular clock reconcile proteins and fossils?
    • Douzery, E. J., E. A. Snell, E. Bapteste, F. Delsuc, and H. Philippe. 2004. The timing of eukaryotic evolution: does a relaxed molecular clock reconcile proteins and fossils? Proc. Natl. Acad. Sci. USA 101:15386-15391.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 15386-15391
    • Douzery, E.J.1    Snell, E.A.2    Bapteste, E.3    Delsuc, F.4    Philippe, H.5
  • 9
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar, R. C. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32:1792-1797.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 10
    • 0019854901 scopus 로고
    • The cycl-11 mutation in yeast reverts by recombination with a nonallelic gene: Composite genes determining the iso-cytochromes c
    • Ernst, J. F., J. W. Stewart, and F. Sherman. 1981. The cycl-11 mutation in yeast reverts by recombination with a nonallelic gene: composite genes determining the iso-cytochromes c. Proc. Natl. Acad. Sci. USA 78:6334-6338.
    • (1981) Proc. Natl. Acad. Sci. USA , vol.78 , pp. 6334-6338
    • Ernst, J.F.1    Stewart, J.W.2    Sherman, F.3
  • 11
    • 0023649687 scopus 로고
    • Pseudogenes in yeast?
    • Fink, G. R. 1987. Pseudogenes in yeast? Cell 49:5-6.
    • (1987) Cell , vol.49 , pp. 5-6
    • Fink, G.R.1
  • 13
  • 14
    • 4544251213 scopus 로고    scopus 로고
    • Cryptococcus neoformans infections at Vancouver Hospital and Health Sciences Centre (1997-2002): Epidemiology, microbiology and histopathology
    • Hoang, L. M., J. A. Maguire, P. Doyle, M. Fyfe, and D. L. Roscoe. 2004. Cryptococcus neoformans infections at Vancouver Hospital and Health Sciences Centre (1997-2002): epidemiology, microbiology and histopathology. J. Med. Microbiol. 53:935-940.
    • (2004) J. Med. Microbiol. , vol.53 , pp. 935-940
    • Hoang, L.M.1    Maguire, J.A.2    Doyle, P.3    Fyfe, M.4    Roscoe, D.L.5
  • 15
  • 17
    • 0021266798 scopus 로고
    • Epidemiologic differences between the two varieties of Cryptococcus neoformans
    • Kwon-Chung, K. J., and J. E. Bennett. 1984. Epidemiologic differences between the two varieties of Cryptococcus neoformans. Am. J. Epidemiol. 120:123-130.
    • (1984) Am. J. Epidemiol. , vol.120 , pp. 123-130
    • Kwon-Chung, K.J.1    Bennett, J.E.2
  • 18
    • 33646193463 scopus 로고    scopus 로고
    • Multilocus sequence typing reveals three genetic subpopulations of Cryptococcus neoformans var. grubii (serotype A), including a unique population in Botswana
    • 1 December, posting date. doi:10.1534/geneties.105.046672
    • Litvintseva, A. P., R. Thakur, R. Vilgalys, and T. G. Mitchell. 1 December 2005, posting date. Multilocus sequence typing reveals three genetic subpopulations of Cryptococcus neoformans var. grubii (serotype A), including a unique population in Botswana. Genetics [Online.] doi:10.1534/genetics.105. 046672.
    • (2005) Genetics [Online]
    • Litvintseva, A.P.1    Thakur, R.2    Vilgalys, R.3    Mitchell, T.G.4
  • 19
    • 0037062440 scopus 로고    scopus 로고
    • Intron presence-absence polymorphism in Drosophila driven by positive Darwinian selection
    • Llopart, A., J. M. Comeron, F. G. Brunet, D. Lachaise, and M. Long. 2002. Intron presence-absence polymorphism in Drosophila driven by positive Darwinian selection. Proc. Natl. Acad. Sci. USA 99:8121-8126.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 8121-8126
    • Llopart, A.1    Comeron, J.M.2    Brunet, F.G.3    Lachaise, D.4    Long, M.5
  • 21
    • 13144253092 scopus 로고    scopus 로고
    • Molecular evolution: Recent cases of spliceosomal intron gain?
    • Logsdon, J. M., Jr., A. Stoltzfus, and W. F. Doolittle. 1998. Molecular evolution: recent cases of spliceosomal intron gain? Curr. Biol. 8:R560-R563.
    • (1998) Curr. Biol. , vol.8
    • Logsdon Jr., J.M.1    Stoltzfus, A.2    Doolittle, W.F.3
  • 22
    • 0038780670 scopus 로고    scopus 로고
    • Eukaryotic intron loss
    • Mourier, T., and D. C. Jeflares. 2003. Eukaryotic intron loss. Science 300: 1393.
    • (2003) Science , vol.300 , pp. 1393
    • Mourier, T.1    Jeflares, D.C.2
  • 24
    • 19544367618 scopus 로고    scopus 로고
    • mRNA-mediated intron losses: Evidence from extraordinarily large exons
    • Niu, D. K., W. R. Hou, and S. W. Li. 2005. mRNA-mediated intron losses: evidence from extraordinarily large exons. Mol. Biol. Evol. 22:1475-1481.
    • (2005) Mol. Biol. Evol. , vol.22 , pp. 1475-1481
    • Niu, D.K.1    Hou, W.R.2    Li, S.W.3
  • 25
    • 0023989064 scopus 로고
    • Improved tools for biological sequence comparison
    • Pearson, W. R., and D. J. Lipman. 1988. Improved tools for biological sequence comparison. Proc. Natl. Acad. Sci. USA 85:2444-2448.
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 2444-2448
    • Pearson, W.R.1    Lipman, D.J.2
  • 28
    • 28444445926 scopus 로고    scopus 로고
    • R Foundation for Statistical Computing, Vienna, Austria
    • R Development Core Team. 2005. R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. http://www.R-project.org.
    • (2005) R: A Language and Environment for Statistical Computing
  • 29
    • 0042921194 scopus 로고    scopus 로고
    • Remarkable interkingdom conservation of intron positions and massive, lineage-specific intron loss and gain in eukaryotic evolution
    • Rogozin, I. B., Y. I. Wolf, A. V. Sorokin, B. G. Mirkin, and E. V. Koonin. 2003. Remarkable interkingdom conservation of intron positions and massive, lineage-specific intron loss and gain in eukaryotic evolution. Curr. Biol. 13:1512-1517.
    • (2003) Curr. Biol. , vol.13 , pp. 1512-1517
    • Rogozin, I.B.1    Wolf, Y.I.2    Sorokin, A.V.3    Mirkin, B.G.4    Koonin, E.V.5
  • 34
    • 0041919102 scopus 로고    scopus 로고
    • Difference in FKS1 gene sequences between serotypcs A and D of Cryptococcus neoformans
    • Tanaka, R., Y. Imanishi, and K. Nishimura. 2003. Difference in FKS1 gene sequences between serotypcs A and D of Cryptococcus neoformans. J. Clin. Microbiol. 41:4457-4459.
    • (2003) J. Clin. Microbiol. , vol.41 , pp. 4457-4459
    • Tanaka, R.1    Imanishi, Y.2    Nishimura, K.3
  • 35
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 36
    • 0033675677 scopus 로고    scopus 로고
    • Multiple gene genealogics reveal recent dispersion and hybridization in the human pathogenic fungus Cryptococcus neoformans
    • Xu, J., R. Vilgalys, and T. G. Mitchell. 2000. Multiple gene genealogics reveal recent dispersion and hybridization in the human pathogenic fungus Cryptococcus neoformans. Mol. Ecol. 9:1471-1481.
    • (2000) Mol. Ecol. , vol.9 , pp. 1471-1481
    • Xu, J.1    Vilgalys, R.2    Mitchell, T.G.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.