-
2
-
-
22244459539
-
Text-mining and information-retrieval services for molecular biology
-
Krallinger, M., Valencia, A.: Text-mining and information-retrieval services for molecular biology. Genome Biol. 6 (2005) 224
-
(2005)
Genome Biol.
, vol.6
, pp. 224
-
-
Krallinger, M.1
Valencia, A.2
-
4
-
-
0034069495
-
Gene ontology: Tool for the unification of biology
-
Ashburner, M., Ball, C., Blake, J., Botstein, D., Butler, H., Cherry, J., Davis, A., Dolinski, K., Dwight, S., Eppig, J., Harris, M., Hill, D., Issel-Tarver, L., Kasarskis, A., Lewis, S., Matese, J., Richardson, J., Ringwald, M., Rubin, G., Sherlock, G.: Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 25 (2000) 25-29
-
(2000)
The Gene Ontology Consortium. Nat Genet
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.2
Blake, J.3
Botstein, D.4
Butler, H.5
Cherry, J.6
Davis, A.7
Dolinski, K.8
Dwight, S.9
Eppig, J.10
Harris, M.11
Hill, D.12
Issel-Tarver, L.13
Kasarskis, A.14
Lewis, S.15
Matese, J.16
Richardson, J.17
Ringwald, M.18
Rubin, G.19
Sherlock, G.20
more..
-
5
-
-
9144252016
-
The Gene Ontology Annotation (GOA) Database: Sharing knowledge in uniprot with gene ontology
-
Camon, E., Magrane, M., Barrell, D., Lee, V., Dimmer, E., Maslen, J., Binns, D., Harte, N., Lopez, R., Apweiler, R.: The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology. Nucleic Acids Res. 32 (2004) 262-266
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 262-266
-
-
Camon, E.1
Magrane, M.2
Barrell, D.3
Lee, V.4
Dimmer, E.5
Maslen, J.6
Binns, D.7
Harte, N.8
Lopez, R.9
Apweiler, R.10
-
6
-
-
9144232912
-
UniProt: The Universal Protein knowledgebase
-
Apweiler, R., Bairoch, A., Wu, C.H., Barker, W.C., Boeckmann, B., Ferro, S., Gasteiger, R., Huang, H., Lopez, R., Magrane, M., Martin, M.J., Natale, D.A., O'Donovan, C., Redaschi, N., Yeh, L.S.: UniProt: the Universal Protein knowledgebase. Nucleic Acids Res 32 (2004) D115-D119
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Apweiler, R.1
Bairoch, A.2
Wu, C.H.3
Barker, W.C.4
Boeckmann, B.5
Ferro, S.6
Gasteiger, R.7
Huang, H.8
Lopez, R.9
Magrane, M.10
Martin, M.J.11
Natale, D.A.12
O'Donovan, C.13
Redaschi, N.14
Yeh, L.S.15
-
7
-
-
2442706422
-
-
Birney, E., Andrews, T.D., Bevan, B., Caccamo, M., Chen, Y., Clarke, L., Coates, G., Cuff, J., Curwen, V., Cutts, T., Down, T., Eyras, E., Fernandez-Suarez, X., Gzane, P., Gibbins, B., Gilbert, J., Hammond, M., Hotz, H., Iyer, V., Jekosch, K., Kahari, A., Kasprzyk, A., Keefe, D., Keenan, S., Lehvaslaiho, H., McVicker, G., Melsopp, C., Meidl, P., Mongin, E., Pettett, R., Potter, S., Proctor, G., Rae, M., Searle, S., Slater, G., Smedley, D., Smith, J., Spooner, W., Stabenau, A., Stalker, J., Storey, R., Ureta-Vidal, A.: An Overview of Ensembl. Genome Res. 14 (2004) 925-928
-
(2004)
An Overview of Ensembl. Genome Res.
, vol.14
, pp. 925-928
-
-
Birney, E.1
Andrews, T.D.2
Bevan, B.3
Caccamo, M.4
Chen, Y.5
Clarke, L.6
Coates, G.7
Cuff, J.8
Curwen, V.9
Cutts, T.10
Down, T.11
Eyras, E.12
Fernandez-Suarez, X.13
Gzane, P.14
Gibbins, B.15
Gilbert, J.16
Hammond, M.17
Hotz, H.18
Iyer, V.19
Jekosch, K.20
Kahari, A.21
Kasprzyk, A.22
Keefe, D.23
Keenan, S.24
Lehvaslaiho, H.25
McVicker, G.26
Melsopp, C.27
Meidl, P.28
Mongin, E.29
Pettett, R.30
Potter, S.31
Proctor, G.32
Rae, M.33
Searle, S.34
Slater, G.35
Smedley, D.36
Smith, J.37
Spooner, W.38
Stabenau, A.39
Stalker, J.40
Storey, R.41
Ureta-Vidal, A.42
more..
-
8
-
-
0034707204
-
Using BLAST for identifying gene and protein names in journal articles
-
Krauthammer, M., Rzhetsky, A., Morozov, P., Friedman, C.: Using BLAST for identifying gene and protein names in journal articles. Gene 259 (2000) 245-252
-
(2000)
Gene
, vol.259
, pp. 245-252
-
-
Krauthammer, M.1
Rzhetsky, A.2
Morozov, P.3
Friedman, C.4
-
9
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S., Gish, W., Miller, W., Myers, E., Lipman, D.: Basic local alignment search tool. J Mol Biol. 215 (1990) 403-410
-
(1990)
J Mol Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.1
Gish, W.2
Miller, W.3
Myers, E.4
Lipman, D.5
-
10
-
-
0345863927
-
The Unified Medical Language System (UMLS): Integrating biomedical terminology
-
Bodenreider, O.: The Unified Medical Language System (UMLS): integrating biomedical terminology. Nucleic Acids Res. 32 (2004) 267-270
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 267-270
-
-
Bodenreider, O.1
-
11
-
-
0036678776
-
Tagging gene and protein names in biomedical text
-
Tanabe, L., Wilbur, W.: Tagging gene and protein names in biomedical text. Bioinformatics 18 (2002) 1124-1132
-
(2002)
Bioinformatics
, vol.18
, pp. 1124-1132
-
-
Tanabe, L.1
Wilbur, W.2
-
12
-
-
1542400018
-
Automated extraction of mutation data from the literature: Application of MuteXt to G protein-coupled receptors and nuclear hormone receptors
-
Horn, F., Lau, A., Cohen, F.: Automated extraction of mutation data from the literature: application of MuteXt to G protein-coupled receptors and nuclear hormone receptors. Bioinformatics. 20 (2004) 557-568
-
(2004)
Bioinformatics
, vol.20
, pp. 557-568
-
-
Horn, F.1
Lau, A.2
Cohen, F.3
-
13
-
-
9544222527
-
Protein names precisely peeled off free text
-
Mika, S., Rost, B.: Protein names precisely peeled off free text. Bioinformatics. 20 (2004) 1241-1247
-
(2004)
Bioinformatics
, vol.20
, pp. 1241-1247
-
-
Mika, S.1
Rost, B.2
-
14
-
-
3242881967
-
NLProt: Extracting protein names and sequences from papers
-
Mika, S., Rost, B.: NLProt: extracting protein names and sequences from papers. Nucleic Acids Res. 32 (2004) W634-W637
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Mika, S.1
Rost, B.2
-
15
-
-
2942549190
-
PreBIND and Textomy-mining the biomedical literature for protein-protein interactions using a support vector machine
-
Donaldson, I., Martin, J., de Bruijn, B., Wolting, C., Lay, V., Tuekam, B., Zhang, S., Baskin, B., Bader, G., Michalickova, K., Pawson, T., Hogue, C.: PreBIND and Textomy-mining the biomedical literature for protein-protein interactions using a support vector machine. BMC Bioinformatics. 4 (2003) 11
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 11
-
-
Donaldson, I.1
Martin, J.2
De Bruijn, B.3
Wolting, C.4
Lay, V.5
Tuekam, B.6
Zhang, S.7
Baskin, B.8
Bader, G.9
Michalickova, K.10
Pawson, T.11
Hogue, C.12
-
16
-
-
0037245913
-
BIND: The Biomolecular Interaction Network Database
-
Bader, G., Betel, D., Hogue, C.: BIND: the Biomolecular Interaction Network Database. Nucleic Acids Res. 31 (2003) 248-250
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 248-250
-
-
Bader, G.1
Betel, D.2
Hogue, C.3
-
17
-
-
0036088133
-
DIP, the Database of Interacting Proteins: A research tool for studying cellular networks of protein interactions
-
Xenarios, I., Salwinski, L., Duan, X., Higney, P., Kim, S., Eisenberg, D.: DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions. Nucleic Acids Res. 30 (2002) 303-305
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 303-305
-
-
Xenarios, I.1
Salwinski, L.2
Duan, X.3
Higney, P.4
Kim, S.5
Eisenberg, D.6
-
18
-
-
13344278672
-
Content-rich biological network constructed by mining PubMed abstracts
-
Chen, H., Sharp, B.: Content-rich biological network constructed by mining PubMed abstracts. BMC Bioinformatics 5 (2004) 147
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 147
-
-
Chen, H.1
Sharp, B.2
|