Evolutionary movement of centromeres in horse, donkey, and zebra

Genomics

Volumn 87, Issue 6, 2006, Pages 777-782

  Carbone, Lucia ^a   Nergadze, Solomon G ^b   Magnani, Elisa ^b   Misceo, Doriana ^a   Francesca Cardone, Maria ^a   Roberto, Roberta ^a   Bertoni, Livia ^b   Attolini, Carmen ^b   Francesca Piras, Maria ^b   de Jong, Pieter ^c   Raudsepp, Terje ^d   Chowdhary, Bhanu P ^d   Guérin, Gérard ^e   Archidiacono, Nicoletta ^a   Rocchi, Mariano ^a   Giulotto, Elena ^b  

^a UNIVERSITY OF BARI   (Italy)

^b UNIVERSITY OF PAVIA   (Italy)

^c CHILDREN S HOSPITAL OAKLAND RESEARCH INSTITUTE   (United States)

^d TEXAS A AND M UNIVERSITY   (United States)

^e Departement de Genetique Animale   (France)

Author keywords

Centromere; Centromere repositioning; Donkey; Evolution; Horse

Indexed keywords

ANIMAL CELL; ARTICLE; CENTROMERE; CHROMOSOME STRUCTURE; CONTROLLED STUDY; DONKEY; EVOLUTION; FLUORESCENCE IN SITU HYBRIDIZATION; GENE SEQUENCE; GENETIC VARIABILITY; HORSE; KARYOTYPE; MOLECULAR CLONING; NONHUMAN; ORTHOLOGY; PRIORITY JOURNAL;

EQUIDAE; EQUUS; EQUUS ASINUS; EQUUS BURCHELLII; EQUUS CABALLUS;

EID: 33646839266     PISSN: 08887543     EISSN: 10898646     Source Type: Journal    
DOI: 10.1016/j.ygeno.2005.11.012     Document Type: Article

References (25)

1. Montefalcone G., Tempesta S., Rocchi M., and Archidiacono N. Centromere repositioning. Genome Res. 9 (1999) 1184-1188
2. Ventura M., Archidiacono N., and Rocchi M. Centromere emergence in evolution. Genome Res. 11 (2001) 595-599
3. Eder V., Ventura M., Ianigro M., Teti M., Rocchi M., and Archidiacono N. Chromosome 6 phylogeny in primates and centromere repositioning. Mol. Biol. Evol. 20 (2003) 1506-1512
4. Ventura M., et al. Neocentromeres in 15q24-26 map to duplicons which flanked an ancestral centromere in 15q25. Genome Res. 13 (2003) 2059-2068
5. Everts-Van Der Wind A., et al. A 1463 gene cattle-human comparative map with anchor points defined by human genome sequence coordinates. Genome Res. 14 (2004) 1424-1437
6. Ferreri G.C., Liscinsky D.M., Mack J.A., Eldridge M.D., and O'Neill R.J. Retention of latent centromeres in the mammalian genome. J. Hered. 96 (2005) 217-224
7. Kasai F., Garcia C., Arruga M.V., and Ferguson-Smith M.A. Chromosome homology between chicken (Gallus gallus domesticus) and the red-legged partridge (Alectoris rufa): evidence of the occurrence of a neocentromere during evolution. Cytogenet. Genome Res. 102 (2003) 326-330
8. Nagaki K., et al. Sequencing of a rice centromere uncovers active genes. Nat. Genet. 36 (2004) 138-145
9. Baldini A., et al. An alphoid DNA sequence conserved in all human and great ape chromosomes: evidence for ancient centromeric sequences at human chromosomal regions 2q21 and 9q13. Hum. Genet. 90 (1993) 577-583
10. Fan Y., Linardopoulou E., Friedman C., Williams E., and Trask B.J. Genomic structure and evolution of the ancestral chromosome fusion site in 2q13-2q14.1 and paralogous regions on other human chromosomes. Genome Res. 12 (2002) 1651-1662
11. She X., et al. The structure and evolution of centromeric transition regions within the human genome. Nature 430 (2004) 857-864
12. Ventura M., et al. Recurrent sites for new centromere seeding. Genome Res. 14 (2004) 1696-1703
13. Oakenfull E., Lim H., and Ryder O. A survey of equid mitochondrial DNA: implications for the evolution, genetic diversity and conservation of Equus. Conserv. Genet. 1 (2000) 341-355
14. Oakenfull E.A., and Clegg J.B. Phylogenetic relationships within the genus Equus and the evolution of alpha and theta globin genes. J. Mol. Evol. 47 (1998) 772-783
15. Yang F., Fu B., O'Brien P.C., Robinson T.J., Ryder O.A., and Ferguson-Smith M.A. Karyotypic relationships of horses and zebras: results of cross-species chromosome painting. Cytogenet. Genome Res. 102 (2003) 235-243
16. Yang F., Fu B., O'Brien P.C.M., Nie W., Ryder O.A., and Ferguson-Smith M.A. Refined genome-wide comparative map of the domestic horse, donkey and human based on cross-species chromosome painting: insight into the occasional fertility of mules. Chromosome Res. 12 (2004) 65-76
17. McPherson J.D., et al. A physical map of the human genome. Nature 409 (2001) 934-941
18. Milenkovic D., et al. Cytogenetic localization of 136 genes in the horse: comparative mapping with the human genome. Mamm. Genome 13 (2002) 524-534
19. Misceo D., et al. Evolutionary history of chromosome 20. Mol. Biol. Evol. 22 (2005) 360-366
20. Bourque G., Zdobnov E.M., Bork P., Pevzner P.A., and Tesler G. Comparative architectures of mammalian and chicken genomes reveal highly variable rates of genomic rearrangements across different lineages. Genome Res. 15 (2005) 98-110
21. Murphy W.J., et al. Dynamics of mammalian chromosome evolution inferred from multispecies comparative maps. Science 309 (2005) 613-617
22. Raudsepp T., Lear T.L., and Chowdhary B.P. Comparative mapping in equids: the asine X chromosome is rearranged compared to horse and Hartmann's mountain zebra. Cytogenet. Genome Res. 96 (2002) 206-209
23. Pardo-Manuel de Villena F., and Sapienza C. Transmission ratio distortion in offspring of heterozygous female carriers of Robertsonian translocations. Hum. Genet. 108 (2001) 31-36
24. Stefansson H., et al. A common inversion under selection in Europeans. Nat. Genet. 37 (2005) 129-137
25. Lichter P., et al. High resolution mapping of human chromosomes 11 by in situ hybridization with cosmid clones. Science 247 (1990) 64-69