A fast DFT based gene prediction algorithm for identification of protein coding regions

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

Volumn V, Issue , 2005, Pages 653-656

  Datta, Suprakash ^a   Asif, Amir ^a  

^a YORK UNIVERSITY   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHMS; DNA SEQUENCES; FREQUENCIES; PROBABILITY DENSITY FUNCTION; PROTEINS; SIGNAL ENCODING;

GENE PREDICTION ALGORITHM; GENOMIC DNA SEQUENCES; PROTEIN CODING; PROTEIN CODING REGIONS;

GENES;

EID: 33646786796     PISSN: 15206149     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/ICASSP.2005.1416388     Document Type: Conference Paper

References (5)

1. S. Tiwari, S. Ramachandran, A. Bhattacharya, S. Bhattacharya, and R. Ramaswamy, "Prediction of Probable Genes by Fourier Analysis of Genomic Sequences," Computer Applications in Biosciences, vol. 113, 1997, pp. 263-70.
2. V. R. Chechetkin and A. Y. Turygin, "Size-dependence of Three-periodicity and Long-range Correlations in DNA Sequences," Physics Letters A, vol. 199, 1995, pp. 75-80.
3. D. Anastassiou, "Frequency Domain Analysis of Biomolecular Sequences," Bioinformatics, 2000, pp. 1073-81.
4. D. Kotlar and Y. Lavner, "Gene Prediction by Spectral Rotation Measure: A New Method for Identifying Protein- Coding Regions," Genome Research, vol. 13(8), 2003, pp. 1930-37.
5. National Centre for Biotechnology Information (NCBI). [On-line]. Available: http://www.ncbi.nlm.nih.gov/.