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Volumn 349, Issue 1, 2006, Pages 164-174

Molecular characterization of a novel coronavirus associated with epizootic catarrhal enteritis (ECE) in ferrets

Author keywords

Consensus PCR for coronaviruses; Coronavirus; Epizootic catarrhal enteritis; Ferret; Mustelo putorius furo

Indexed keywords

MEMBRANE PROTEIN; NUCLEOCAPSID PROTEIN;

EID: 33646519885     PISSN: 00426822     EISSN: 10960341     Source Type: Journal    
DOI: 10.1016/j.virol.2006.01.031     Document Type: Article
Times cited : (59)

References (52)
  • 2
    • 0027270736 scopus 로고
    • Sequence determination of the nucleocapsid protein gene of the porcine epidemic diarrhea virus confirms that this is a coronavirus related to human coronavirus 229E and porcine transmissible gastroenteritis virus
    • Bridgen A., Duarte M., Tobler K., Laude H., and Ackermann M. Sequence determination of the nucleocapsid protein gene of the porcine epidemic diarrhea virus confirms that this is a coronavirus related to human coronavirus 229E and porcine transmissible gastroenteritis virus. J. Gen. Virol. 74 (1993) 1795-1804
    • (1993) J. Gen. Virol. , vol.74 , pp. 1795-1804
    • Bridgen, A.1    Duarte, M.2    Tobler, K.3    Laude, H.4    Ackermann, M.5
  • 3
    • 0021984654 scopus 로고
    • Three intergenic regions of coronavirus mouse hepatitis virus strain A59 genome RNA contain a common nucleotide sequence that is homologous to the 3′ end of the viral mRNA leader sequence
    • Budzilowicz C.J., Wilczynski S.P., and Weiss S.R. Three intergenic regions of coronavirus mouse hepatitis virus strain A59 genome RNA contain a common nucleotide sequence that is homologous to the 3′ end of the viral mRNA leader sequence. J. Virol. 53 (1985) 834-840
    • (1985) J. Virol. , vol.53 , pp. 834-840
    • Budzilowicz, C.J.1    Wilczynski, S.P.2    Weiss, S.R.3
  • 4
    • 0035192831 scopus 로고    scopus 로고
    • Comparison of genomic and predicted amino acid sequences of respiratory and enteric bovine coronaviruses isolated from the same animal with fatal shipping pneumonia
    • Chouljenko V.N., Lin X.Q., Kousoulas K.G., and Gorbalenya A.E. Comparison of genomic and predicted amino acid sequences of respiratory and enteric bovine coronaviruses isolated from the same animal with fatal shipping pneumonia. J. Gen. Virol. 82 (2001) 2927-2933
    • (2001) J. Gen. Virol. , vol.82 , pp. 2927-2933
    • Chouljenko, V.N.1    Lin, X.Q.2    Kousoulas, K.G.3    Gorbalenya, A.E.4
  • 5
    • 0025550252 scopus 로고
    • Sequence comparisons of the 3′ end of the genomes of five strains of avian infectious bronchitis virus
    • Collison E.W., Williams A.K., Haar R.V., Li W., and Sneed L.W. Sequence comparisons of the 3′ end of the genomes of five strains of avian infectious bronchitis virus. Adv. Exp. Med. Biol. 276 (1990) 373-377
    • (1990) Adv. Exp. Med. Biol. , vol.276 , pp. 373-377
    • Collison, E.W.1    Williams, A.K.2    Haar, R.V.3    Li, W.4    Sneed, L.W.5
  • 6
    • 0024193119 scopus 로고
    • Sequence analysis of the 3′ end of the feline coronavirus FIPV 79-1146 genome: comparison with the genome of porcine coronavirus TGEV reveals large insertions
    • De Groot R.J., Andeweg A.C., Horzinek M.C., and Spaan W.J.M. Sequence analysis of the 3′ end of the feline coronavirus FIPV 79-1146 genome: comparison with the genome of porcine coronavirus TGEV reveals large insertions. Virology 167 (1988) 370-376
    • (1988) Virology , vol.167 , pp. 370-376
    • De Groot, R.J.1    Andeweg, A.C.2    Horzinek, M.C.3    Spaan, W.J.M.4
  • 7
    • 84945737762 scopus 로고
    • A leisurely look at the bootstrap, the jackknife, and cross-validation
    • Efron B., and Gong G. A leisurely look at the bootstrap, the jackknife, and cross-validation. Am. Stat. 37 (1983) 36-48
    • (1983) Am. Stat. , vol.37 , pp. 36-48
    • Efron, B.1    Gong, G.2
  • 9
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: an approach using the bootstrap
    • Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39 (1985) 783-791
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 10
    • 0344304518 scopus 로고    scopus 로고
    • A comparative sequence analysis to revise the current taxonomy of the family Coronaviridae
    • Gonzalez J.M., Gomez-Puertas P., Cavanagh D., Gorbalenya A.E., and Enjuanes L. A comparative sequence analysis to revise the current taxonomy of the family Coronaviridae. Arch. Virol. 148 (2003) 2207-2235
    • (2003) Arch. Virol. , vol.148 , pp. 2207-2235
    • Gonzalez, J.M.1    Gomez-Puertas, P.2    Cavanagh, D.3    Gorbalenya, A.E.4    Enjuanes, L.5
  • 11
    • 0036190639 scopus 로고    scopus 로고
    • Mutational analysis of the active centre of coronavirus 3C-like proteases
    • Hegyi A., Friebe A., and Gorbalenya A.E. Mutational analysis of the active centre of coronavirus 3C-like proteases. J. Gen. Virol. 83 (2002) 581-593
    • (2002) J. Gen. Virol. , vol.83 , pp. 581-593
    • Hegyi, A.1    Friebe, A.2    Gorbalenya, A.E.3
  • 12
    • 0028863417 scopus 로고
    • The molecular genetics of feline coronaviruses: comparative sequence analysis of the ORF7a/7b transcription unit of different biotypes
    • Herrewegh A.A.P.M., Vennema H., Horzinek M.C., Rottier P.J.M., and de Groot R.J. The molecular genetics of feline coronaviruses: comparative sequence analysis of the ORF7a/7b transcription unit of different biotypes. Virology 212 (1995) 622-631
    • (1995) Virology , vol.212 , pp. 622-631
    • Herrewegh, A.A.P.M.1    Vennema, H.2    Horzinek, M.C.3    Rottier, P.J.M.4    de Groot, R.J.5
  • 14
    • 1942514620 scopus 로고    scopus 로고
    • Coronaviruses
    • Granoff A., and Webster R.G. (Eds), Academic Press, San Diego
    • Holmes K.V. Coronaviruses. In: Granoff A., and Webster R.G. (Eds). Encyclopedia of Virology (1999), Academic Press, San Diego 291-298
    • (1999) Encyclopedia of Virology , pp. 291-298
    • Holmes, K.V.1
  • 15
    • 0026490456 scopus 로고
    • Analysis of a 9.6 kb sequence from the 3′ end of canine coronavirus genomic RNA
    • Horsburgh B.C., Brierley I., and Brown T.D.K. Analysis of a 9.6 kb sequence from the 3′ end of canine coronavirus genomic RNA. J. Gen. Virol. 73 (1992) 2849-2862
    • (1992) J. Gen. Virol. , vol.73 , pp. 2849-2862
    • Horsburgh, B.C.1    Brierley, I.2    Brown, T.D.K.3
  • 16
    • 0022610639 scopus 로고
    • Sequence analysis of the porcine transmissible gastroenteritis coronavirus nucleocapsid protein gene
    • Kapke P.A., and Brian D.A. Sequence analysis of the porcine transmissible gastroenteritis coronavirus nucleocapsid protein gene. Virology 151 (1986) 41-49
    • (1986) Virology , vol.151 , pp. 41-49
    • Kapke, P.A.1    Brian, D.A.2
  • 17
    • 0032561431 scopus 로고    scopus 로고
    • Cellular composition, coronavirus antigen expression and production of specific antibodies in lesions in feline infectious peritonitis
    • Kipar A., Bellman S., Kremendahl J., Kohler K., and Reinacher M. Cellular composition, coronavirus antigen expression and production of specific antibodies in lesions in feline infectious peritonitis. Vet. Immunol. Immunopathol. 65 (1998) 243-257
    • (1998) Vet. Immunol. Immunopathol. , vol.65 , pp. 243-257
    • Kipar, A.1    Bellman, S.2    Kremendahl, J.3    Kohler, K.4    Reinacher, M.5
  • 19
    • 0035229038 scopus 로고    scopus 로고
    • Viral replication and lesions in BALB/c mice experimentally inoculated with porcine circovirus (PCV) isolated from a pig with postweaning multisystemic wasting disease (PMWS)
    • Kiupel M., Stevenson G.W., Choi J., Latimer K.S., Kanitz C.L., and Mittal S.K. Viral replication and lesions in BALB/c mice experimentally inoculated with porcine circovirus (PCV) isolated from a pig with postweaning multisystemic wasting disease (PMWS). Vet. Pathol. 38 (2001) 74-82
    • (2001) Vet. Pathol. , vol.38 , pp. 74-82
    • Kiupel, M.1    Stevenson, G.W.2    Choi, J.3    Latimer, K.S.4    Kanitz, C.L.5    Mittal, S.K.6
  • 20
    • 0034749116 scopus 로고    scopus 로고
    • Completion of the porcine epidemic diarrhoea coronavirus (PEDV) genome sequence
    • Kocherhans R., Bridgen A., Ackermann M., and Tobler K. Completion of the porcine epidemic diarrhoea coronavirus (PEDV) genome sequence. Virus Genes 23 (2001) 137-144
    • (2001) Virus Genes , vol.23 , pp. 137-144
    • Kocherhans, R.1    Bridgen, A.2    Ackermann, M.3    Tobler, K.4
  • 21
    • 0026593989 scopus 로고
    • Genetic recombination in RNA viruses
    • Lai M.M.C. Genetic recombination in RNA viruses. Curr. Top. Microbiol. Immunol. 176 (1992) 21-32
    • (1992) Curr. Top. Microbiol. Immunol. , vol.176 , pp. 21-32
    • Lai, M.M.C.1
  • 22
    • 0030440990 scopus 로고    scopus 로고
    • Recombination in large RNA viruses: coronaviruses
    • Lai M.M.C. Recombination in large RNA viruses: coronaviruses. Semin. Virol. 7 (1996) 381-388
    • (1996) Semin. Virol. , vol.7 , pp. 381-388
    • Lai, M.M.C.1
  • 23
    • 0030633479 scopus 로고    scopus 로고
    • The molecular biology of coronaviruses
    • Lai M.M.C., and Cavanagh D. The molecular biology of coronaviruses. Adv. Virus Res. 48 (1997) 1-100
    • (1997) Adv. Virus Res. , vol.48 , pp. 1-100
    • Lai, M.M.C.1    Cavanagh, D.2
  • 24
    • 0026505444 scopus 로고
    • Identification of two new polypeptides encoded by mRNA5 of the coronavirus infectious bronchitis virus
    • Liu D.X., and Inglis S.C. Identification of two new polypeptides encoded by mRNA5 of the coronavirus infectious bronchitis virus. Virology 186 (1992) 342-347
    • (1992) Virology , vol.186 , pp. 342-347
    • Liu, D.X.1    Inglis, S.C.2
  • 25
    • 0026077511 scopus 로고
    • A polycistronic mRNA specified by the coronavirus infectious bronchitis virus
    • Liu D.X., Cavanagh D., Green I.J., and Inglis S.C. A polycistronic mRNA specified by the coronavirus infectious bronchitis virus. Virology 184 (1991) 531-544
    • (1991) Virology , vol.184 , pp. 531-544
    • Liu, D.X.1    Cavanagh, D.2    Green, I.J.3    Inglis, S.C.4
  • 28
    • 0037126614 scopus 로고    scopus 로고
    • Sequence requirements for RNA strand transfer during nidovirus discontinuous subgenomic RNA synthesis
    • Pasternak A.O., van den Born E., Spaan W.J.M., and Snijder E.J. Sequence requirements for RNA strand transfer during nidovirus discontinuous subgenomic RNA synthesis. EMBO J. 20 (2000) 7220-7228
    • (2000) EMBO J. , vol.20 , pp. 7220-7228
    • Pasternak, A.O.1    van den Born, E.2    Spaan, W.J.M.3    Snijder, E.J.4
  • 30
    • 0003295959 scopus 로고    scopus 로고
    • ForCon: a software tool for the conversion of sequence alignments
    • (Available at: http://www.embnet.org/download/embnetnews/embnet_news_6_1.pdf)
    • Raes J., and Van de Peer Y. ForCon: a software tool for the conversion of sequence alignments. EMBnet News 6 1 (1999) 10-12. http://www.embnet.org/download/embnetnews/embnet_news_6_1.pdf (Available at: http://www.embnet.org/download/embnetnews/embnet_news_6_1.pdf)
    • (1999) EMBnet News , vol.6 , Issue.1 , pp. 10-12
    • Raes, J.1    Van de Peer, Y.2
  • 32
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • Saitou N., and Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4 (1987) 406-425
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 34
    • 0029444973 scopus 로고
    • Coronaviruses use discontinuous extension for synthesis of subgenome-length negative strands
    • Sawicki S.G., and Sawicki D.L. Coronaviruses use discontinuous extension for synthesis of subgenome-length negative strands. Adv. Exp. Med. Biol. 380 (1995) 499-506
    • (1995) Adv. Exp. Med. Biol. , vol.380 , pp. 499-506
    • Sawicki, S.G.1    Sawicki, D.L.2
  • 35
    • 0031783431 scopus 로고    scopus 로고
    • A new model for coronavirus transcription
    • Sawicki S.G., and Sawicki D.L. A new model for coronavirus transcription. Adv. Exp. Med. Biol. 440 (1998) 215-219
    • (1998) Adv. Exp. Med. Biol. , vol.440 , pp. 215-219
    • Sawicki, S.G.1    Sawicki, D.L.2
  • 36
    • 0002000418 scopus 로고
    • The Coronaviridae: an introduction
    • Siddell S.G. (Ed), Plenum Press, New York
    • Siddell S.G. The Coronaviridae: an introduction. In: Siddell S.G. (Ed). The Coronaviridae (1995), Plenum Press, New York 1-10
    • (1995) The Coronaviridae , pp. 1-10
    • Siddell, S.G.1
  • 40
    • 0024226792 scopus 로고
    • Coronaviruses: structure and genome expression
    • Spaan W., Cavanagh D., and Horzinek M.C. Coronaviruses: structure and genome expression. J. Gen. Virol. 69 (1988) 2939-2952
    • (1988) J. Gen. Virol. , vol.69 , pp. 2939-2952
    • Spaan, W.1    Cavanagh, D.2    Horzinek, M.C.3
  • 41
    • 0020480482 scopus 로고
    • Automation of the computer handling of the gel reading data produced by the shotgun method of DNA sequencing
    • Staden R. Automation of the computer handling of the gel reading data produced by the shotgun method of DNA sequencing. Nucleic Acids Res. 10 (1982) 4731-4751
    • (1982) Nucleic Acids Res. , vol.10 , pp. 4731-4751
    • Staden, R.1
  • 42
    • 0032972895 scopus 로고    scopus 로고
    • Phylogenetic analysis of a highly conserved region of the polymerase gene from 11 coronaviruses and development of a consensus polymerase chain reaction assay
    • Stephensen C.B., Casebolt D.B., and Gangopadhyay N.N. Phylogenetic analysis of a highly conserved region of the polymerase gene from 11 coronaviruses and development of a consensus polymerase chain reaction assay. Virus Res. 60 (1999) 181-189
    • (1999) Virus Res. , vol.60 , pp. 181-189
    • Stephensen, C.B.1    Casebolt, D.B.2    Gangopadhyay, N.N.3
  • 43
    • 0027968068 scopus 로고
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22 (1994) 4673-4680
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 44
    • 0030306053 scopus 로고    scopus 로고
    • Identifikation und charakterisierung von neuen und unbekannten coronaviren mit hilfe von RT-PCR und degenerierten primern
    • Tobler K., and Ackermann M. Identifikation und charakterisierung von neuen und unbekannten coronaviren mit hilfe von RT-PCR und degenerierten primern. Schweiz. Arch. Tierheilk. 138 (1996) 80-86
    • (1996) Schweiz. Arch. Tierheilk. , vol.138 , pp. 80-86
    • Tobler, K.1    Ackermann, M.2
  • 45
    • 0026537137 scopus 로고
    • The 9-kDa hydrophobic protein encoded at the 3′ end of the porcine transmissible gastroenteritis coronavirus genome is membrane-associated
    • Tung F.Y.T., Abraham S., Sethna M., Hung S.-L., Sethna P., Hogue B.G., and Brian D.A. The 9-kDa hydrophobic protein encoded at the 3′ end of the porcine transmissible gastroenteritis coronavirus genome is membrane-associated. Virology 186 (1992) 676-683
    • (1992) Virology , vol.186 , pp. 676-683
    • Tung, F.Y.T.1    Abraham, S.2    Sethna, M.3    Hung, S.-L.4    Sethna, P.5    Hogue, B.G.6    Brian, D.A.7
  • 46
    • 0028509254 scopus 로고
    • TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment
    • Van de Peer Y., and De Wachter R. TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment. Comput. Appl. Biosci. 10 (1994) 569-570
    • (1994) Comput. Appl. Biosci. , vol.10 , pp. 569-570
    • Van de Peer, Y.1    De Wachter, R.2
  • 47
    • 0026787463 scopus 로고
    • Genomic organization and expression of the 3′ end of the canine and feline enteric coronaviruses
    • Vennema H., Rossen J.W.A., Wesseling J., Horzinek M.C., and Rottier P.J.M. Genomic organization and expression of the 3′ end of the canine and feline enteric coronaviruses. Virology 191 (1992) 134-140
    • (1992) Virology , vol.191 , pp. 134-140
    • Vennema, H.1    Rossen, J.W.A.2    Wesseling, J.3    Horzinek, M.C.4    Rottier, P.J.M.5
  • 48
    • 0026642088 scopus 로고
    • A novel glycoprotein of feline infectious peritonitis coronavirus contains a KDEL-like endoplasmic reticulum retention signal
    • Vennema H., Heunen L., Rottier P.J.M., Horzinek M.C., and Spaan W.J.M. A novel glycoprotein of feline infectious peritonitis coronavirus contains a KDEL-like endoplasmic reticulum retention signal. J. Virol. 66 (1992) 4951-4956
    • (1992) J. Virol. , vol.66 , pp. 4951-4956
    • Vennema, H.1    Heunen, L.2    Rottier, P.J.M.3    Horzinek, M.C.4    Spaan, W.J.M.5
  • 51
    • 0029901640 scopus 로고    scopus 로고
    • Analysis of compositionally biased regions in sequence databases
    • Wootton J.C., and Federhen S. Analysis of compositionally biased regions in sequence databases. Methods Enzymol. 266 (1996) 554-571
    • (1996) Methods Enzymol. , vol.266 , pp. 554-571
    • Wootton, J.C.1    Federhen, S.2
  • 52
    • 12944281566 scopus 로고    scopus 로고
    • Testing the hypothesis of a recombinant origin of the SARS-associated coronavirus
    • Zhang X.W., Yap Y.L., and Danchin A. Testing the hypothesis of a recombinant origin of the SARS-associated coronavirus. Arch. Virol. 150 (2005) 1-20
    • (2005) Arch. Virol. , vol.150 , pp. 1-20
    • Zhang, X.W.1    Yap, Y.L.2    Danchin, A.3


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