Associations between milk performance traits in holstein cows and 16 candidate SNPs identified by arrayed primer extension (APEX) microarray

Animal Biotechnology

Volumn 17, Issue 1, 2006, Pages 1-11

  Kaminski S ^a   Brym, P ^a   Rusc A ^a   Wojcik E ^a   Ahman, A ^b   Magi R ^c  

^a UNIVERSITY OF WARMIA AND MAZURY IN OLSZTYN   (Poland)

^b Asper Biotech Ltd   (Estonia)

^c UNIVERSITY OF TARTU   (Estonia)

Author keywords

APEX; Dairy cattle; Microarray; Milk performance; SNP

Indexed keywords

ANIMAL CELL CULTURE; BIOSYNTHESIS; GENES; HORMONES;

APEX; DAIRY CATTLE; MICROARRAY; MILK PERFORMANCE; OLIGONUCLEOTIDE MICROARRAY;

DAIRY PRODUCTS;

BOS TAURUS;

CASEIN; DIACYLGLYCEROL ACYLTRANSFERASE; GROWTH HORMONE RECEPTOR; LACTOFERRIN; LEPTIN; MILK PROTEIN;

ANIMAL; ARTICLE; BIOSYNTHESIS; CATTLE; DNA MICROARRAY; FEMALE; GENETICS; GENOTYPE; LACTATION; MALE; METHODOLOGY; MILK; PHYSIOLOGY; SECRETION; SINGLE NUCLEOTIDE POLYMORPHISM;

ANIMALS; CASEINS; CATTLE; DIACYLGLYCEROL O-ACYLTRANSFERASE; FEMALE; GENOTYPE; LACTATION; LACTOFERRIN; LEPTIN; MALE; MILK; MILK PROTEINS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; POLYMORPHISM, SINGLE NUCLEOTIDE; RECEPTORS, SOMATOTROPIN;

EID: 33646459956     PISSN: 10495398     EISSN: None     Source Type: Journal    
DOI: 10.1080/08941920500460906     Document Type: Article

References (17)

1. Schwerin M. Structural and functional genomics in domestic animals: The way to understand the phenotype. J Appl Genet 2001; 42(3):293-308.
2. Kamiński S, Ruść A, Malewski T. Single nucleotide polymorphism database of candidate genes associated with cow milk protein biosynthesis. J Anim Feed Sci 2004; 13:53-66.
3. Lien S, Kaminski S, Alestrom P, Rogne S. A simple and powerful method for linkage analysis by amplification of DNA from single sperm cells. Genomics 1993; 16:41-44.
4. Lindersson M, Lunden A, Andersson L. Genotyping bovine milk proteins using allele discrimination by primer length and automated DNA sizing technology. Anim Genet 1995; 26(2):67-72.
5. Kamiński S, Ahman A, Ruść A, Wójcik E, Malewski T. MilkProtChip - a microarray of SNPs in candidate genes associated with milk protein biosynthesis - development and validation. J Appl Genet 2005; 46(1):45-58.
6. Kurg A, Tonisson N, Georgiou I, Shumaker J, Tollett J, Metspalu A. Arrayed primer extension: Solid-phase four-color DNA resequencing and mutation detection technology. Genet Test 2000; 4(1): 1-7.
7. SAS Institute Inc. SAS Online Doc, Version 8. 1999, Cary, NC, SAS Institute Inc.
8. Statsoft, Inc. 2001, Statistica 6.0, www.statsoft.com.
9. Grisart B, Coppieters W, Farnir F, Karim L, Ford Ch, Berzi P, Cambisano N, Mni M, Reid S, Simon P, Spelman R, Georges M, Snell RW. Positional candidate cloning of QTL in dairy cattle: Identification of a missense mutation in the bovine DGAT1 gene with major effect on milk yield and composition. Genome Res 2002; 12(2):222-231.
10. Thaller G, Kraemer W, Winter A, Kaupe B, Erhardt G, Fries R. Effects of DGAT1 variants on milk production traits in German cattle breeds. J Anim Sci 2003; 81(8): 1911-1918.
11. Jakob E, Puhan Z. Technological properties of milk as influenced by genetic polymor-phism of milk proteins. Inter Dairy J 1992; 2:157-178.
12. Boichard D, Grohs C, Bourgeois F, Cerqueira F, Faugeras R, Neau A, Rupp R, Amigues Y, Boscher MY, Leveziel H. Detection of genes influencing economic traits in three French dairy cattle breeds. Genet Sel Evol 2003; 35(1):77-101.
13. Rodriguez-Zas SL, Southey BR, Heyen DW, Lewin HA. Interval and composite interval mapping of somatic cell score, yield, and components of milk in dairy cattle. J Dairy Sci 2002; 85(11):3081-3091.
14. Mosig MO, Lipkin E, Khutoreskaya G, Tchourzyna E, Soller M, Friedmann A. A whole genome scan for quantitative trait loci affecting milk protein percentage in Israeli-Holstein cattle, by means of selective milk DNA pooling in a daughter design, using an adjusted false discovery rate criterion. Genetics 2001; 157(4):1683-1698.
15. Blott S, Kim JJ, Moisio S, Schmidt-Kuntzel A, Cornet A, Berzi P, Cambisano N, Ford Ch, Grisart B, Johnson D, Karim L, Simon P, Snell R, Spelman R. Wong J, Vilkki J, Georges M, Farnir F, Coppieters W. Molecular dissection of a quantitative trait locus: A phenylalanine to tyrosine substitution in the transmembrane domain of the bovine growth hormone receptor is associated with a major effect on milk yield and composition. Genetics 2003; 163(1):253-266.
16. Werner FAO, Durstewitz G, Habermann FA, Thaller G, Kramer W, Kollers S, Buitkamp J, Georges M, Brem G, Mosner J, Fries R. Detection and characterization of SNPs useful for identity control and paternity testing in major European dairy breeds. Anim Genet 2004; 35:44-49.
17. Shumaker JM, Metspalu A, Caskey CT. Mutation detection by solid phase primer extension. Hum Mutat 1996; 7(4):346-354.