-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul S.F., Madden T.F., Schaffer A.A., Zang J., Zhang Z., Miller W., and Lipman D.J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25 (1997) 3389-3402
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.F.2
Schaffer, A.A.3
Zang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
10444281982
-
Truncated RIP-degenerated copies of the LTR retrotransposon Pholy are clustered in a pericentrometric region of the Leptosphaeria maculans genome
-
Attard A., Gout L., Ross S., Parlange F., Cattolico L., Balesdent M.-H., and Rouxel T. Truncated RIP-degenerated copies of the LTR retrotransposon Pholy are clustered in a pericentrometric region of the Leptosphaeria maculans genome. Fungal Gen. Biol. 42 (2005) 30-41
-
(2005)
Fungal Gen. Biol.
, vol.42
, pp. 30-41
-
-
Attard, A.1
Gout, L.2
Ross, S.3
Parlange, F.4
Cattolico, L.5
Balesdent, M.-H.6
Rouxel, T.7
-
4
-
-
0842348173
-
MATE transposable elements in Aspergillus nidulans: evidence of repeat-induced point mutation
-
Clutterbuck A.J. MATE transposable elements in Aspergillus nidulans: evidence of repeat-induced point mutation. Fungal Gen. Biol. 41 (2004) 308-316
-
(2004)
Fungal Gen. Biol.
, vol.41
, pp. 308-316
-
-
Clutterbuck, A.J.1
-
5
-
-
0036360286
-
Isolation of CpG islands using a methyl-CpG binding column
-
Mills K.L., and Ramshoye B.H. (Eds), Humana Press
-
Cross S.H. Isolation of CpG islands using a methyl-CpG binding column. In: Mills K.L., and Ramshoye B.H. (Eds). Methods in Molecular Biology Vol. 200 (2002), Humana Press 111-130
-
(2002)
Methods in Molecular Biology
, vol.200
, pp. 111-130
-
-
Cross, S.H.1
-
6
-
-
0036218759
-
Evolution of the Fot1 transposons in the genus Fusarium: discontinuous distribution and epigenetic inactivation
-
Daboussi M.J., Davière J.-M., Graziani S., and Langin T. Evolution of the Fot1 transposons in the genus Fusarium: discontinuous distribution and epigenetic inactivation. Mol. Biol. Evol. 19 (2002) 510-520
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 510-520
-
-
Daboussi, M.J.1
Davière, J.-M.2
Graziani, S.3
Langin, T.4
-
7
-
-
0141468761
-
Transposable elements in filamentous fungi
-
Daboussi M.J., and Capy P. Transposable elements in filamentous fungi. Annu. Rev. Microbiol. 57 (2003) 275-299
-
(2003)
Annu. Rev. Microbiol.
, vol.57
, pp. 275-299
-
-
Daboussi, M.J.1
Capy, P.2
-
8
-
-
0141703524
-
Genomics reveals sexual secrets of Aspergillus
-
Dyer P.S., Paoletti M., and Archer D.B. Genomics reveals sexual secrets of Aspergillus. Microbiology 149 (2003) 1-3
-
(2003)
Microbiology
, vol.149
, pp. 1-3
-
-
Dyer, P.S.1
Paoletti, M.2
Archer, D.B.3
-
9
-
-
0037172977
-
A cytosine methyltransferase homologue is essential for repeat-induced point mutation in Neurospora crassa
-
Freitag M., Williams R.L., Kothe G.O., and Selker E.U. A cytosine methyltransferase homologue is essential for repeat-induced point mutation in Neurospora crassa. Proc. Natl. Acad. Sci. USA 99 (2002) 8802-8807
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 8802-8807
-
-
Freitag, M.1
Williams, R.L.2
Kothe, G.O.3
Selker, E.U.4
-
10
-
-
4143050271
-
RIP: the evolutionary cost of genome defence
-
Galagan J.E., and Selker E.U. RIP: the evolutionary cost of genome defence. Trends Genet. 20 (2004) 417-423
-
(2004)
Trends Genet.
, vol.20
, pp. 417-423
-
-
Galagan, J.E.1
Selker, E.U.2
-
11
-
-
28844461287
-
Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae
-
Supplementary information S5.
-
Galagan J.E., Calvo S.E., Cuomo C., Ma L.-J., Wortman J.R., et al. Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae. Nature 438 (2005) 1105-1115 Supplementary information S5.
-
(2005)
Nature
, vol.438
, pp. 1105-1115
-
-
Galagan, J.E.1
Calvo, S.E.2
Cuomo, C.3
Ma, L.-J.4
Wortman, J.R.5
-
12
-
-
0029619756
-
The isolation of Ant1, a transposable element from Aspergillus niger
-
Glayzer D.C., Roberts I.N., Archer D.B., and Oliver R.P. The isolation of Ant1, a transposable element from Aspergillus niger. Mol. Gen. Genet. 249 (1995) 432-438
-
(1995)
Mol. Gen. Genet.
, vol.249
, pp. 432-438
-
-
Glayzer, D.C.1
Roberts, I.N.2
Archer, D.B.3
Oliver, R.P.4
-
13
-
-
0035960702
-
DNA from Aspergillus flavus contains 5-methylcytosine
-
Gowher H., Ehrlich K.C., and Jeltsch A. DNA from Aspergillus flavus contains 5-methylcytosine. FEMS Microbiol. Lett. 205 (2001) 151-155
-
(2001)
FEMS Microbiol. Lett.
, vol.205
, pp. 151-155
-
-
Gowher, H.1
Ehrlich, K.C.2
Jeltsch, A.3
-
14
-
-
0035019826
-
Genome quality control: RIP (repeat-induced point mutation) comes to Podospora
-
Graia F., Lespinet O., Rimbault B., Dequard-Chablat M., Coppin E., and Picard M. Genome quality control: RIP (repeat-induced point mutation) comes to Podospora. Mol. Microbiol. 40 (2001) 586-595
-
(2001)
Mol. Microbiol.
, vol.40
, pp. 586-595
-
-
Graia, F.1
Lespinet, O.2
Rimbault, B.3
Dequard-Chablat, M.4
Coppin, E.5
Picard, M.6
-
15
-
-
0033794795
-
The degenerate DNA transposon Pat and repeat-induced point mutation (RIP) in Podospera anserina
-
Hamman A., Feller F., and Osiewacz H.D. The degenerate DNA transposon Pat and repeat-induced point mutation (RIP) in Podospera anserina. Mol. Gen. Genet. 263 (2000) 1061-1069
-
(2000)
Mol. Gen. Genet.
, vol.263
, pp. 1061-1069
-
-
Hamman, A.1
Feller, F.2
Osiewacz, H.D.3
-
16
-
-
23344431640
-
Repeat-induced point mutation and the population structure of transposable elements in Microbotryum violaceum
-
Hood M.E., Katawczik M., and Giraud T. Repeat-induced point mutation and the population structure of transposable elements in Microbotryum violaceum. Genetics 170 (2005) 1081-1089
-
(2005)
Genetics
, vol.170
, pp. 1081-1089
-
-
Hood, M.E.1
Katawczik, M.2
Giraud, T.3
-
17
-
-
0034809756
-
Evolutionary history of the impala transposon in Fusarium oxysporum
-
Hua-Van A., Langin T., and Daboussi M.J. Evolutionary history of the impala transposon in Fusarium oxysporum. Mol. Biol. Evol. 18 (2001) 1959-1969
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 1959-1969
-
-
Hua-Van, A.1
Langin, T.2
Daboussi, M.J.3
-
18
-
-
0036042881
-
Repeat-induced point mutation (RIP) in Magnaporthe grisea: implications for its sexual cycle in the natural field context
-
Ikeda K., Nakayashiki H., Kataoka T., Tamba H., Hashimoto Y., Tosa Y., and Mayama S. Repeat-induced point mutation (RIP) in Magnaporthe grisea: implications for its sexual cycle in the natural field context. Mol. Microbiol. 45 (2002) 1355-1364
-
(2002)
Mol. Microbiol.
, vol.45
, pp. 1355-1364
-
-
Ikeda, K.1
Nakayashiki, H.2
Kataoka, T.3
Tamba, H.4
Hashimoto, Y.5
Tosa, Y.6
Mayama, S.7
-
19
-
-
0035422440
-
dim-2 encodes a DNA methyltransferase responsible for all known cytosine methylation in Neurospora
-
Kouzminova E., and Selker E.U. dim-2 encodes a DNA methyltransferase responsible for all known cytosine methylation in Neurospora. EMBO J. 20 (2001) 4309-4323
-
(2001)
EMBO J.
, vol.20
, pp. 4309-4323
-
-
Kouzminova, E.1
Selker, E.U.2
-
20
-
-
29244442741
-
Genome sequencing and analysis of Aspergillus oryzae
-
Machida M., Asai K., Sano M., Tanaka T., Kumagai T., et al. Genome sequencing and analysis of Aspergillus oryzae. Nature 438 (2005) 1157-1161
-
(2005)
Nature
, vol.438
, pp. 1157-1161
-
-
Machida, M.1
Asai, K.2
Sano, M.3
Tanaka, T.4
Kumagai, T.5
-
21
-
-
0030726203
-
A gene essential for de novo methylation and development in Ascobolus reveals a novel type of eukaryotic DNA methyltransferase structure
-
Malagnac F., Wendel B., Goyon C., Faugeron G., Zickler D., Rossignol J.L., Noyer-Weidner M., Vollmayr P., Trautner T.A., and Walter J. A gene essential for de novo methylation and development in Ascobolus reveals a novel type of eukaryotic DNA methyltransferase structure. Cell 91 (1997) 281-290
-
(1997)
Cell
, vol.91
, pp. 281-290
-
-
Malagnac, F.1
Wendel, B.2
Goyon, C.3
Faugeron, G.4
Zickler, D.5
Rossignol, J.L.6
Noyer-Weidner, M.7
Vollmayr, P.8
Trautner, T.A.9
Walter, J.10
-
22
-
-
10744233927
-
Genetic differentiation of the Aspergillus section Flavi complex using AFLP fingerprints
-
Montiel D., Dickinson M.J., Lee H.A., Dyer P.S., Jeenes D.J., Roberts I.N., James S.J., Fuller L.J., Matsuchima K., and Archer D.B. Genetic differentiation of the Aspergillus section Flavi complex using AFLP fingerprints. Mycol. Res. 107 (2003) 1427-1434
-
(2003)
Mycol. Res.
, vol.107
, pp. 1427-1434
-
-
Montiel, D.1
Dickinson, M.J.2
Lee, H.A.3
Dyer, P.S.4
Jeenes, D.J.5
Roberts, I.N.6
James, S.J.7
Fuller, L.J.8
Matsuchima, K.9
Archer, D.B.10
-
23
-
-
0032429596
-
Isolation and characterisation of the acetyl-CoA carboxylase gene from Aspergillus nidulans
-
Morrice J., MacKenzie D.A., Parr A.J., and Archer D.B. Isolation and characterisation of the acetyl-CoA carboxylase gene from Aspergillus nidulans. Curr. Genet. 34 (1998) 379-385
-
(1998)
Curr. Genet.
, vol.34
, pp. 379-385
-
-
Morrice, J.1
MacKenzie, D.A.2
Parr, A.J.3
Archer, D.B.4
-
24
-
-
0032791387
-
Degenerate MAGGY elements in a subgroup of Pyricularia grisea: a possible example of successful capture of a genetic invader by a fungal genome
-
Nakayashiki H., Nishimoto N., Ikeda K., Tosa Y., and Mayama S. Degenerate MAGGY elements in a subgroup of Pyricularia grisea: a possible example of successful capture of a genetic invader by a fungal genome. Mol. Gen. Genet. 261 (1999) 958-966
-
(1999)
Mol. Gen. Genet.
, vol.261
, pp. 958-966
-
-
Nakayashiki, H.1
Nishimoto, N.2
Ikeda, K.3
Tosa, Y.4
Mayama, S.5
-
25
-
-
0035869113
-
Methylation is not the main force repressing the retrotransposon MAGGY in Magnaporthe grisea
-
Nakayashiki H., Ikeda K., Hashimoto Y., Toas Y., and Mayama S. Methylation is not the main force repressing the retrotransposon MAGGY in Magnaporthe grisea. Nucleic Acids Res. 29 (2001) 1278-1284
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 1278-1284
-
-
Nakayashiki, H.1
Ikeda, K.2
Hashimoto, Y.3
Toas, Y.4
Mayama, S.5
-
26
-
-
0029924326
-
Afut1, a retrotransposon-like element from Aspergillus fumigatus
-
Neuveglise C., Sarfati J., Latge J.P., and Paris S. Afut1, a retrotransposon-like element from Aspergillus fumigatus. Nucleic Acids Res. 24 (1996) 1428-1434
-
(1996)
Nucleic Acids Res.
, vol.24
, pp. 1428-1434
-
-
Neuveglise, C.1
Sarfati, J.2
Latge, J.P.3
Paris, S.4
-
27
-
-
0034890466
-
A family of DNA repeats in Aspergillus nidulans has assimilated degenerated retrotransposons
-
Nielsen M.L., Hermansen T.D., and Aleksenko A. A family of DNA repeats in Aspergillus nidulans has assimilated degenerated retrotransposons. Mol. Genet. Gen. 265 (2001) 883-887
-
(2001)
Mol. Genet. Gen.
, vol.265
, pp. 883-887
-
-
Nielsen, M.L.1
Hermansen, T.D.2
Aleksenko, A.3
-
28
-
-
0029990885
-
The transposable element Tan1 of Aspergillus niger var. awamori, a new member of the Fot1 family
-
Nyyssonen E., Amutan M., Enfield L., Stubbs J., and Dunn-Coleman N.S. The transposable element Tan1 of Aspergillus niger var. awamori, a new member of the Fot1 family. Mol. Gen. Genet. 253 (1996) 50-56
-
(1996)
Mol. Gen. Genet.
, vol.253
, pp. 50-56
-
-
Nyyssonen, E.1
Amutan, M.2
Enfield, L.3
Stubbs, J.4
Dunn-Coleman, N.S.5
-
29
-
-
21844450884
-
Evidence for sexuality in the opportunistic fungal pathogen Aspergillus fumigatus
-
Paoletti M., Rydholm C., Schwier E.U., Anderson M.J., Szakacs G., Lutzoni F., Debeaupuis J.P., Latgé J.P., Denning D.W., and Dyer P.S. Evidence for sexuality in the opportunistic fungal pathogen Aspergillus fumigatus. Curr. Biol. 15 (2005) 1242-1248
-
(2005)
Curr. Biol.
, vol.15
, pp. 1242-1248
-
-
Paoletti, M.1
Rydholm, C.2
Schwier, E.U.3
Anderson, M.J.4
Szakacs, G.5
Lutzoni, F.6
Debeaupuis, J.P.7
Latgé, J.P.8
Denning, D.W.9
Dyer, P.S.10
-
30
-
-
0023644245
-
Rearrangement of duplicated DNA in specialized cells of Neurospora
-
Selker E.U., Cambareri E.B., Jensen B.C., and Haack K.R. Rearrangement of duplicated DNA in specialized cells of Neurospora. Cell 51 (1987) 741-752
-
(1987)
Cell
, vol.51
, pp. 741-752
-
-
Selker, E.U.1
Cambareri, E.B.2
Jensen, B.C.3
Haack, K.R.4
-
31
-
-
0242416979
-
The methylated component of the Neurospora crassa genome
-
Selker E.U., Tountas N.A., Cross S.H., Margolin B.S., Murphy J.G., Bird A.P., and Freitag M. The methylated component of the Neurospora crassa genome. Nature 422 (2003) 893-897
-
(2003)
Nature
, vol.422
, pp. 893-897
-
-
Selker, E.U.1
Tountas, N.A.2
Cross, S.H.3
Margolin, B.S.4
Murphy, J.G.5
Bird, A.P.6
Freitag, M.7
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