-
1
-
-
24744468804
-
Production and validation of the use of gamma phage for identification of Bacillus anthracis
-
Abshire, T. G., J. E. Brown, and J. W. Ezzell. 2005. Production and validation of the use of gamma phage for identification of Bacillus anthracis. J. Clin. Microbiol. 43:4780-4788.
-
(2005)
J. Clin. Microbiol.
, vol.43
, pp. 4780-4788
-
-
Abshire, T.G.1
Brown, J.E.2
Ezzell, J.W.3
-
2
-
-
0004078614
-
-
Interscience Publishers, Inc., New York, N.Y.
-
Adams, M, H. 1959. Bacteriophages, p. 443-465. Interscience Publishers, Inc., New York, N.Y.
-
(1959)
Bacteriophages
, pp. 443-465
-
-
Adams, M.H.1
-
3
-
-
0001994838
-
Specific identification of Bacillus anthracis by means of a variant bacteriophage
-
Brown, E. R., and W. B. Cherry. 1955. Specific identification of Bacillus anthracis by means of a variant bacteriophage. J. Infect. Dis. 96:34-39.
-
(1955)
J. Infect. Dis.
, vol.96
, pp. 34-39
-
-
Brown, E.R.1
Cherry, W.B.2
-
4
-
-
0034942865
-
Universal trees based on large combined protein sequence data sets
-
Brown, J. R., C. J. Douady, M. J. Italia, W. E. Marshall, and M. J. Stanhope. 2001. Universal trees based on large combined protein sequence data sets. Nat. Genet. 28:281-285.
-
(2001)
Nat. Genet.
, vol.28
, pp. 281-285
-
-
Brown, J.R.1
Douady, C.J.2
Italia, M.J.3
Marshall, W.E.4
Stanhope, M.J.5
-
5
-
-
0030572374
-
Classification and identification of bacteria: Current approaches to an old problem. Overview of methods used in bacterial systematics
-
Busse, H. J., E. B. Denner, and W. Lubitz. 1996. Classification and identification of bacteria: current approaches to an old problem. Overview of methods used in bacterial systematics. J. Biotechnol. 47:3-38.
-
(1996)
J. Biotechnol.
, vol.47
, pp. 3-38
-
-
Busse, H.J.1
Denner, E.B.2
Lubitz, W.3
-
6
-
-
19944434101
-
The generalized transducing Salmonella bacteriophage ES18: Complete genome sequence and DNA packaging strategy
-
Casjens, S. R., E. B. Gilcrease, D. A. Winn-Stapley, P. Schicklmaier, H. Schmieger, M. L. Pedulla, M. E. Ford, J. M. Houtz, G. F. Hatfull, and R. W. Hendrix. 2005. The generalized transducing Salmonella bacteriophage ES18: complete genome sequence and DNA packaging strategy. J. Bacteriol. 187:1091-1104.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 1091-1104
-
-
Casjens, S.R.1
Gilcrease, E.B.2
Winn-Stapley, D.A.3
Schicklmaier, P.4
Schmieger, H.5
Pedulla, M.L.6
Ford, M.E.7
Houtz, J.M.8
Hatfull, G.F.9
Hendrix, R.W.10
-
7
-
-
0038332658
-
A "bacteriophage" active against a hemolytic streptococcus
-
Clark, P. F., and A. S. Clark. 1926. A "bacteriophage" active against a hemolytic streptococcus. J. Bacteriol. 11:89.
-
(1926)
J. Bacteriol.
, vol.11
, pp. 89
-
-
Clark, P.F.1
Clark, A.S.2
-
8
-
-
25144447562
-
Identification of the Bacillus anthracis γ phage receptor
-
Davison, S., E. Couture-Tosi, T. Candela, M. Mock, and A. Fouet. 2005. Identification of the Bacillus anthracis γ phage receptor. J. Bacteriol. 187:6742-6749.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 6742-6749
-
-
Davison, S.1
Couture-Tosi, E.2
Candela, T.3
Mock, M.4
Fouet, A.5
-
9
-
-
0033485517
-
Improved microbial gene identification with GLIMMER
-
Delcher, A. L., D. Harmon, S. Kasif, O. White, and S. L. Salzberg. 1999. Improved microbial gene identification with GLIMMER. Nucleic Acids Res. 27:4636-4641.
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 4636-4641
-
-
Delcher, A.L.1
Harmon, D.2
Kasif, S.3
White, O.4
Salzberg, S.L.5
-
11
-
-
20044387762
-
Major structural differences and novel potential virulence mechanisms from the genomes of multiple Campylobacter species
-
Fouts, D. E., E. F. Mongodin, R. E. Mandrell, W. G. Miller, D. A. Rasko, J. Ravel, L. M. Brinkac, R. T. DeBoy, C. T. Parker, S. C. Daugherty, R. J. Dodson, A. S. Durkin, R. Madupu, S. A. Sullivan, J. U. Shetty, M. A. Ayodeji, A. Shvartsbeyn, M. C. Schatz, J. H. Badger, C. M. Fraser, and K. E. Nelson. 2005. Major structural differences and novel potential virulence mechanisms from the genomes of multiple Campylobacter species. PLoS Biol. 3:e15.
-
(2005)
PLoS Biol.
, vol.3
-
-
Fouts, D.E.1
Mongodin, E.F.2
Mandrell, R.E.3
Miller, W.G.4
Rasko, D.A.5
Ravel, J.6
Brinkac, L.M.7
DeBoy, R.T.8
Parker, C.T.9
Daugherty, S.C.10
Dodson, R.J.11
Durkin, A.S.12
Madupu, R.13
Sullivan, S.A.14
Shetty, J.U.15
Ayodeji, M.A.16
Shvartsbeyn, A.17
Schatz, M.C.18
Badger, J.H.19
Fraser, C.M.20
Nelson, K.E.21
more..
-
12
-
-
0018974560
-
The phylogeny of prokaryotes
-
Fox, G. E., E. Stackebrandt, R. B. Hespell, J. Gibson, J. Maniloff, T. A. Dyer, R. S. Wolfe, W. E. Balch, R. S. Tanner, L. J. Magrum, L. B. Zablen, R. Blakemore, R. Gupta, L. Bonen, B. J. Lewis, D. A. Stahl, K. R. Luehrsen, K. N. Chen, and C. R. Woese. 1980. The phylogeny of prokaryotes. Science 209:457-463.
-
(1980)
Science
, vol.209
, pp. 457-463
-
-
Fox, G.E.1
Stackebrandt, E.2
Hespell, R.B.3
Gibson, J.4
Maniloff, J.5
Dyer, T.A.6
Wolfe, R.S.7
Balch, W.E.8
Tanner, R.S.9
Magrum, L.J.10
Zablen, L.B.11
Blakemore, R.12
Gupta, R.13
Bonen, L.14
Lewis, B.J.15
Stahl, D.A.16
Luehrsen, K.R.17
Chen, K.N.18
Woese, C.R.19
-
14
-
-
0032725193
-
Cloning and analysis of the capsid morphogenesis genes of Pseudomonas aeruginosa bacteriophage D3: Another example of protein chain mail? J
-
Gilakjan, Z. A., and A. M. Kropinski. 1999. Cloning and analysis of the capsid morphogenesis genes of Pseudomonas aeruginosa bacteriophage D3: another example of protein chain mail? J. Bacteriol. 181:7221-7227.
-
(1999)
Bacteriol.
, vol.181
, pp. 7221-7227
-
-
Gilakjan, Z.A.1
Kropinski, A.M.2
-
15
-
-
0038752612
-
Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis
-
Ivanova, N., A. Sorokin, I. Anderson, N. Galleron, B. Candelon, V. Kapatral, A. Bhattacharyya, G. Reznik, N. Mikhailova, A. Lapidus, L. Chu, M. Mazur, E. Goltsman, N. Larsen, M. D'Souza, T. Walunas, Y. Grechkin, G. Pusch, R. Haselkorn, M. Fonstein, S. D. Ehrlich, R. Overbeek, and N. Kyrpides. 2003. Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis. Nature 423:87-91.
-
(2003)
Nature
, vol.423
, pp. 87-91
-
-
Ivanova, N.1
Sorokin, A.2
Anderson, I.3
Galleron, N.4
Candelon, B.5
Kapatral, V.6
Bhattacharyya, A.7
Reznik, G.8
Mikhailova, N.9
Lapidus, A.10
Chu, L.11
Mazur, M.12
Goltsman, E.13
Larsen, N.14
D'Souza, M.15
Walunas, T.16
Grechkin, Y.17
Pusch, G.18
Haselkorn, R.19
Fonstein, M.20
Ehrlich, S.D.21
Overbeek, R.22
Kyrpides, N.23
more..
-
16
-
-
33646249347
-
Phenocopy of resistance to phage W in Bacillus anthracis
-
Ivánovics, G., and J. Lantos. 1962. Phenocopy of resistance to phage W in Bacillus anthracis. Acta Microbiol. Acad. Sci. Hung. 9:237-246.
-
(1962)
Acta Microbiol. Acad. Sci. Hung.
, vol.9
, pp. 237-246
-
-
Ivánovics, G.1
Lantos, J.2
-
17
-
-
0021828769
-
Phylogenetic analysis of the genera Thiobacillus and Thiomicrospira by 5S rRNA sequences
-
Lane, D. J., D. A. Stahl, G. J. Olsen, D. J. Heller, and N. R. Pace. 1985. Phylogenetic analysis of the genera Thiobacillus and Thiomicrospira by 5S rRNA sequences. J. Bacteriol. 163:75-81.
-
(1985)
J. Bacteriol.
, vol.163
, pp. 75-81
-
-
Lane, D.J.1
Stahl, D.A.2
Olsen, G.J.3
Heller, D.J.4
Pace, N.R.5
-
18
-
-
39749120433
-
Preparing lambda DNA from phage lysates
-
F. M. Ausubel, R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith, and K. Struhl (ed.). John Wiley & Sons, Inc., New York, N.Y.
-
Lech, K. 1990. Preparing lambda DNA from phage lysates, p. 1.13.1-1.13.10. In F. M. Ausubel, R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith, and K. Struhl (ed.), Current protocols in molecular biology, 1st ed., vol. 1. John Wiley & Sons, Inc., New York, N.Y.
-
(1990)
Current Protocols in Molecular Biology, 1st Ed.
, vol.1
-
-
Lech, K.1
-
19
-
-
3042563761
-
Displacements of prohead protease genes in the late operons of double-stranded-DNA bacteriophages
-
Liu, J., and A. Mushegian. 2004. Displacements of prohead protease genes in the late operons of double-stranded-DNA bacteriophages. J. Bacteriol. 186:4369-4375.
-
(2004)
J. Bacteriol.
, vol.186
, pp. 4369-4375
-
-
Liu, J.1
Mushegian, A.2
-
20
-
-
0033959106
-
Complete nucleotide sequence, molecular analysis and genome structure of bacteriophage A118 of Listeria monocytogenes: Implications for phage evolution
-
Loessner, M. J., R. B. Inman, P. Lauer, and R. Calendar. 2000. Complete nucleotide sequence, molecular analysis and genome structure of bacteriophage A118 of Listeria monocytogenes: implications for phage evolution. Mol. Microbiol. 35:324-340.
-
(2000)
Mol. Microbiol.
, vol.35
, pp. 324-340
-
-
Loessner, M.J.1
Inman, R.B.2
Lauer, P.3
Calendar, R.4
-
21
-
-
84924926584
-
Studies on a lysogenic Bacillus strain. 1. A bacteriophage specific for B. anthracis
-
McCloy, E. W. 1951. Studies on a lysogenic Bacillus strain. 1. A bacteriophage specific for B. anthracis. J. Hyg. 49:114-125.
-
(1951)
J. Hyg.
, vol.49
, pp. 114-125
-
-
McCloy, E.W.1
-
22
-
-
27344456855
-
Genome sequence and gene expression of Bacillus anthracis bacteriophage Fah
-
Minakhin, L., E. Semenova, J. Liu, A. Vasilov, E. Severinova, T. Gabisonia, R. Inman, A. Mushegian, and K. Severinov. 2005. Genome sequence and gene expression of Bacillus anthracis bacteriophage Fah. J. Mol. Biol. 354:1-15.
-
(2005)
J. Mol. Biol.
, vol.354
, pp. 1-15
-
-
Minakhin, L.1
Semenova, E.2
Liu, J.3
Vasilov, A.4
Severinova, E.5
Gabisonia, T.6
Inman, R.7
Mushegian, A.8
Severinov, K.9
-
23
-
-
0034623005
-
T-Coffee: A novel method for fast and accurate multiple sequence alignment
-
Notredame, C., D. G. Higgins, and J. Heringa. 2000. T-Coffee: a novel method for fast and accurate multiple sequence alignment. J. Mol. Biol. 302:205-217.
-
(2000)
J. Mol. Biol.
, vol.302
, pp. 205-217
-
-
Notredame, C.1
Higgins, D.G.2
Heringa, J.3
-
24
-
-
13244252316
-
Visualization of comparative genomic analyses by BLAST score ratio
-
23a. Rasko, D. A., G. S. Myers, and J. Ravel. 2005. Visualization of comparative genomic analyses by BLAST score ratio. BMC Bioinformatics 6:2.
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 2
-
-
Rasko, D.A.1
Myers, G.S.2
Ravel, J.3
-
25
-
-
2342507052
-
The genome sequence of Bacillus cereus ATCC 10987 reveals metabolic adaptations and a large plasmid related to Bacillus anthracis pXO1
-
Rasko, D. A., J. Ravel, O. A. Okstad, E. Helgason, R. Z. Cer, L. Jiang, K. A. Shores, D. E. Fouts, N. J. Tourasse, S. V. Angiuoli, J. Kolonay, W. C. Nelson, A. B. Kolsto, C. M. Fraser, and T. D. Read. 2004. The genome sequence of Bacillus cereus ATCC 10987 reveals metabolic adaptations and a large plasmid related to Bacillus anthracis pXO1. Nucleic Acids Res. 32:977-988.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 977-988
-
-
Rasko, D.A.1
Ravel, J.2
Okstad, O.A.3
Helgason, E.4
Cer, R.Z.5
Jiang, L.6
Shores, K.A.7
Fouts, D.E.8
Tourasse, N.J.9
Angiuoli, S.V.10
Kolonay, J.11
Nelson, W.C.12
Kolsto, A.B.13
Fraser, C.M.14
Read, T.D.15
-
26
-
-
0038752613
-
The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria
-
Read, T. D., S. N. Peterson, N. Tourasse, L. W. Baillie, I. T. Paulsen, K. E. Nelson, H, Tettelin, D. E. Fouts, J. A. Eisen, S. R. Gill, E. K. Holtzapple, O. A. Okstad, E. Helgason, J. Rilstone, M. Wu, J. F. Kolonay, M. J. Beanan, R. J. Dodson, L. M. Brinkac, M. Gwinn, R. T. DeBoy, R. Madpu, S. C. Daugherty, A. S. Durkin, D. H. Haft, W. C. Nelson, J. D. Peterson, M. Pop, H. M. Khouri, D. Radune, J. L. Benton, Y. Mahamoud, L. Jiang, I. R. Hance, J. F. Weidman, K. J. Berry, R. D. Flaut, A. M. Wolf, K. L. Watkins, W. C. Nierman, A. Hazen, R. Cline, C. Redmond, J. E. Thwaite, O. White, S. L. Salzberg, B. Thomason, A. M. Friedlander, T. M. Koehler, P. C. Hanna, A. B. Kolsto, and C. M. Fraser. 2003. The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria. Nature 423:81-86.
-
(2003)
Nature
, vol.423
, pp. 81-86
-
-
Read, T.D.1
Peterson, S.N.2
Tourasse, N.3
Baillie, L.W.4
Paulsen, I.T.5
Nelson, K.E.6
Tettelin, H.7
Fouts, D.E.8
Eisen, J.A.9
Gill, S.R.10
Holtzapple, E.K.11
Okstad, O.A.12
Helgason, E.13
Rilstone, J.14
Wu, M.15
Kolonay, J.F.16
Beanan, M.J.17
Dodson, R.J.18
Brinkac, L.M.19
Gwinn, M.20
DeBoy, R.T.21
Madpu, R.22
Daugherty, S.C.23
Durkin, A.S.24
Haft, D.H.25
Nelson, W.C.26
Peterson, J.D.27
Pop, M.28
Khouri, H.M.29
Radune, D.30
Benton, J.L.31
Mahamoud, Y.32
Jiang, L.33
Hance, I.R.34
Weidman, J.F.35
Berry, K.J.36
Flaut, R.D.37
Wolf, A.M.38
Watkins, K.L.39
Nierman, W.C.40
Hazen, A.41
Cline, R.42
Redmond, C.43
Thwaite, J.E.44
White, O.45
Salzberg, S.L.46
Thomason, B.47
Friedlander, A.M.48
Koehler, T.M.49
Hanna, P.C.50
Kolsto, A.B.51
Fraser, C.M.52
more..
-
27
-
-
0036330981
-
The Phage Proteomic Tree: A genome-based taxonomy for phage
-
Rohwer, F., and R. Edwards. 2002. The Phage Proteomic Tree: a genome-based taxonomy for phage. J. Bacteriol. 184:4529-4535.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 4529-4535
-
-
Rohwer, F.1
Edwards, R.2
-
28
-
-
3042826875
-
Identification and phylogenetic sorting of bacterial lineages with universally conserved genes and proteins
-
Santos, S. R., and H. Ochman. 2004. Identification and phylogenetic sorting of bacterial lineages with universally conserved genes and proteins. Environ. Microbiol. 6:754-759.
-
(2004)
Environ. Microbiol.
, vol.6
, pp. 754-759
-
-
Santos, S.R.1
Ochman, H.2
-
29
-
-
33645967146
-
Detailed genomic analysis of the Wβ and γ phages infecting Bacillus anthracis: Implications for evolution of environmental fitness and antibiotic resistance
-
Schuch, R., and V. A. Fischetti. 2006. Detailed genomic analysis of the Wβ and γ phages infecting Bacillus anthracis: implications for evolution of environmental fitness and antibiotic resistance. J. Bacteriol. 188:3037-3051.
-
(2006)
J. Bacteriol.
, vol.188
, pp. 3037-3051
-
-
Schuch, R.1
Fischetti, V.A.2
-
30
-
-
0037158695
-
A bacteriolytic agent that detects and kills Bacillus anthracis
-
Schuch, R., D. Nelson, and V. A. Fischetti. 2002. A bacteriolytic agent that detects and kills Bacillus anthracis. Nature 418:884-889.
-
(2002)
Nature
, vol.418
, pp. 884-889
-
-
Schuch, R.1
Nelson, D.2
Fischetti, V.A.3
-
31
-
-
7044227902
-
Improved isolation of undersampled bacteriophages: Finding of distant terminase genes
-
Serwer, P., S. J. Hayes, S. Zaman, K. Lieman, M. Rolando, and S. C. Hardies. 2004, Improved isolation of undersampled bacteriophages: finding of distant terminase genes. Virology 329:412-424.
-
(2004)
Virology
, vol.329
, pp. 412-424
-
-
Serwer, P.1
Hayes, S.J.2
Zaman, S.3
Lieman, K.4
Rolando, M.5
Hardies, S.C.6
-
32
-
-
0036229438
-
Diversity in the serine recombinases
-
Smith, M. C., and H. M. Thorpe. 2002. Diversity in the serine recombinases. Mol. Microbiol. 44:299-307.
-
(2002)
Mol. Microbiol.
, vol.44
, pp. 299-307
-
-
Smith, M.C.1
Thorpe, H.M.2
-
33
-
-
0014591380
-
The course of phage phi-e infection in sporulating cells of Bacillus subtilis strain 3610
-
Sonenshein, A. L., and D. H. Roscoe. 1969. The course of phage phi-e infection in sporulating cells of Bacillus subtilis strain 3610. Virology 39:265-275.
-
(1969)
Virology
, vol.39
, pp. 265-275
-
-
Sonenshein, A.L.1
Roscoe, D.H.2
-
34
-
-
0036042515
-
A collagen-like surface glycoprotein is a structural component of the Bacillus anthracis exosporium
-
Sylvestre, P., E. Couture-Tosi, and M. Mock. 2002. A collagen-like surface glycoprotein is a structural component of the Bacillus anthracis exosporium. Mol. Microbiol. 45:159-178.
-
(2002)
Mol. Microbiol.
, vol.45
, pp. 159-178
-
-
Sylvestre, P.1
Couture-Tosi, E.2
Mock, M.3
-
35
-
-
30044451295
-
Incorporation of bacteriophage genome by spores of Bacillus subtilis
-
Takahashi, I. 1964. Incorporation of bacteriophage genome by spores of Bacillus subtilis. J. Bacteriol. 87:1499-1502.
-
(1964)
J. Bacteriol.
, vol.87
, pp. 1499-1502
-
-
Takahashi, I.1
-
36
-
-
0038529792
-
Genes of Bacillus cereus and Bacillus anthracis encoding proteins of the exosporium
-
Todd, S. J., A. J. Moir, M. J. Johnson, and A. Moir. 2003. Genes of Bacillus cereus and Bacillus anthracis encoding proteins of the exosporium. J. Bacteriol. 185:3373-3378.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 3373-3378
-
-
Todd, S.J.1
Moir, A.J.2
Johnson, M.J.3
Moir, A.4
-
37
-
-
0016571753
-
The fine structure and the protein composition of gamma phage of Bacillus anthracis
-
Watanabe, T., A. Morimoto, and T. Shiomi. 1975. The fine structure and the protein composition of gamma phage of Bacillus anthracis. Can. J. Microbiol. 21:1889-1892.
-
(1975)
Can. J. Microbiol.
, vol.21
, pp. 1889-1892
-
-
Watanabe, T.1
Morimoto, A.2
Shiomi, T.3
-
38
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Zuker, M. 2003. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 31:3406-3415.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
|