메뉴 건너뛰기




Volumn 55, Issue 6, 2006, Pages 936-948

Automated scanning for phylogenetically informative transposed elements in rodents

Author keywords

Automated scanning; CPAL; Mouse; Phylogeny; Rodents; SINE

Indexed keywords

RODENTIA;

EID: 33646237451     PISSN: 10635157     EISSN: 1076836X     Source Type: Journal    
DOI: 10.1080/10635150601064806     Document Type: Article
Times cited : (24)

References (72)
  • 1
    • 0035028769 scopus 로고    scopus 로고
    • Molecular phylogeny and divergence time estimates for major rodent groups: Evidence from multiple genes
    • Adkins, R. M., E. L. Gelke, D. Rowe, and R. L. Honeycutt. 2001. Molecular phylogeny and divergence time estimates for major rodent groups: Evidence from multiple genes. Mol. Biol. Evol. 18:777-791.
    • (2001) Mol. Biol. Evol , vol.18 , pp. 777-791
    • Adkins, R.M.1    Gelke, E.L.2    Rowe, D.3    Honeycutt, R.L.4
  • 2
    • 0037355121 scopus 로고    scopus 로고
    • Higher-level systematics of rodents and divergence time estimates based on two congruent nuclear genes
    • Adkins, R. M., A. H. Walton, and R. L. Honeycutt. 2003. Higher-level systematics of rodents and divergence time estimates based on two congruent nuclear genes. Mol. Phylogenet. Evol. 26:409-420.
    • (2003) Mol. Phylogenet. Evol , vol.26 , pp. 409-420
    • Adkins, R.M.1    Walton, A.H.2    Honeycutt, R.L.3
  • 3
    • 66249126018 scopus 로고    scopus 로고
    • Brandt, J. F. 1855. Beitrage zur nahern Kenntniss der Saugethiere Russlands. Mem. Acad. Imp. St. Petersbourg Sen 69:1-375.
    • Brandt, J. F. 1855. Beitrage zur nahern Kenntniss der Saugethiere Russlands. Mem. Acad. Imp. St. Petersbourg Sen 69:1-375.
  • 4
    • 0032865868 scopus 로고    scopus 로고
    • RNAs from all categories generate retrosequences that may be exapted as novel genes or regulatory elements
    • Brosius, J. 1999. RNAs from all categories generate retrosequences that may be exapted as novel genes or regulatory elements. Gene 238:115-134.
    • (1999) Gene , vol.238 , pp. 115-134
    • Brosius, J.1
  • 5
    • 0000507221 scopus 로고
    • Systematic value of the carotid arterial pattern in rodents
    • W. P. Luckett and J.-L. Hartenberger, eds, Plenum Press, New York and London
    • Bugge, J. 1985. Systematic value of the carotid arterial pattern in rodents. Pages 381-402 in Evolutionary relationships among rodents: A multidisciplinary analysis (W. P. Luckett and J.-L. Hartenberger, eds.). Plenum Press, New York and London.
    • (1985) Evolutionary relationships among rodents: A multidisciplinary analysis , pp. 381-402
    • Bugge, J.1
  • 7
    • 0023338451 scopus 로고
    • DNA-DNA hybridization evidence of the rapid rate of muroid rodent DNA evolution
    • Catzeflis, F. M., F. H. Sheldon, J. E. Ahlquist, and C. G. Sibley. 1987. DNA-DNA hybridization evidence of the rapid rate of muroid rodent DNA evolution. Mol. Biol. Evol. 4:242-253.
    • (1987) Mol. Biol. Evol , vol.4 , pp. 242-253
    • Catzeflis, F.M.1    Sheldon, F.H.2    Ahlquist, J.E.3    Sibley, C.G.4
  • 9
    • 0242487521 scopus 로고    scopus 로고
    • Identifying conflicting signal in a multigene analysis reveals a highly resolved tree: The phylogeny of Rodentia (Mammalia)
    • DeBry, R. W. 2003. Identifying conflicting signal in a multigene analysis reveals a highly resolved tree: The phylogeny of Rodentia (Mammalia). Syst. Biol. 52:604-617.
    • (2003) Syst. Biol , vol.52 , pp. 604-617
    • DeBry, R.W.1
  • 10
    • 0034783678 scopus 로고    scopus 로고
    • Phylogeny of Rodentia (Mammalia) inferred from the nuclear-encoded gene IRBP
    • DeBry, R. W., and R. M. Sagel. 2001. Phylogeny of Rodentia (Mammalia) inferred from the nuclear-encoded gene IRBP. Mol. Phylogenet. Evol. 19:290-301.
    • (2001) Mol. Phylogenet. Evol , vol.19 , pp. 290-301
    • DeBry, R.W.1    Sagel, R.M.2
  • 12
    • 0036181734 scopus 로고    scopus 로고
    • Evolutionary history of 4.5SI RNA and indication that it is functional
    • Gogolevskaya, I. K., and D. A. Kramerov. 2002. Evolutionary history of 4.5SI RNA and indication that it is functional. J. Mol. Evol. 54:354-364.
    • (2002) J. Mol. Evol , vol.54 , pp. 354-364
    • Gogolevskaya, I.K.1    Kramerov, D.A.2
  • 13
    • 0026428609 scopus 로고
    • Is the guinea-pig a rodent?
    • Graur, D., W. A. Hide, and W.-H. Li. 1991. Is the guinea-pig a rodent? Nature 351:649-652.
    • (1991) Nature , vol.351 , pp. 649-652
    • Graur, D.1    Hide, W.A.2    Li, W.-H.3
  • 14
    • 0001842636 scopus 로고
    • The order Rodentia: Major questions on their evolutionary origin, relationships and suprafamilial systematics
    • W. P. Luckett and J.-L. Hartenberger, eds, Plenum Press, New York and London
    • Hartenberger, J.-L. 1985. The order Rodentia: Major questions on their evolutionary origin, relationships and suprafamilial systematics. Pages 1-33 in Evolutionary relationships among rodents: A multidisciplinary analysis (W. P. Luckett and J.-L. Hartenberger, eds.). Plenum Press, New York and London.
    • (1985) Evolutionary relationships among rodents: A multidisciplinary analysis , pp. 1-33
    • Hartenberger, J.-L.1
  • 15
    • 0031869943 scopus 로고    scopus 로고
    • Description of the radiation of the Rodentia (Mammalia) from the Late Paleocene to the Miocene; phylogenetic consequences
    • Serie II
    • Hartenberger, J.-L. 1998. Description of the radiation of the Rodentia (Mammalia) from the Late Paleocene to the Miocene; phylogenetic consequences. Comptes Rendus de l'Academie des Sciences Serie II 326:439-444.
    • (1998) Comptes Rendus de l'Academie des Sciences , vol.326 , pp. 439-444
    • Hartenberger, J.-L.1
  • 16
    • 0032908075 scopus 로고    scopus 로고
    • Molecular evolution of the nuclear von Willebrand factor gene in mammals and the phylogeny of rodents
    • Huchon, D., F. M. Catzeflis, and E. J. P. Douzery. 1999. Molecular evolution of the nuclear von Willebrand factor gene in mammals and the phylogeny of rodents. Mol. Biol. Evol. 16:577-589.
    • (1999) Mol. Biol. Evol , vol.16 , pp. 577-589
    • Huchon, D.1    Catzeflis, F.M.2    Douzery, E.J.P.3
  • 17
    • 0034701104 scopus 로고    scopus 로고
    • Variance of molecular datings, evolution of rodents, and the phylogenetic affinities between Ctenodactylidae and Hystricognathi
    • Huchon, D., F. M. Catzeflis, and E. J. P. Douzery. 2000. Variance of molecular datings, evolution of rodents, and the phylogenetic affinities between Ctenodactylidae and Hystricognathi. Proc. R. Soc. Lond. B 267:393-02.
    • (2000) Proc. R. Soc. Lond. B , vol.267 , pp. 393-402
    • Huchon, D.1    Catzeflis, F.M.2    Douzery, E.J.P.3
  • 18
    • 0034886217 scopus 로고    scopus 로고
    • From the Old-World to the New-World: A molecular chronicle of the phylogeny and biogeography of hystricognath rodents
    • Huchon, D., and E. J. P. Douzery. 2001. From the Old-World to the New-World: A molecular chronicle of the phylogeny and biogeography of hystricognath rodents. Mol. Phylogenet. Evol. 20:238-251.
    • (2001) Mol. Phylogenet. Evol , vol.20 , pp. 238-251
    • Huchon, D.1    Douzery, E.J.P.2
  • 19
    • 0035986875 scopus 로고    scopus 로고
    • Rodent phylogeny and a timescale for the evolution of glires: Evidence from an extensive taxon sampling using three nuclear genes
    • Huchon, D., O. Madsen, M. J. J. B. Sibbald, K. Ament, M. Stanhope, F. Catzeflis, W. W. De Jong, and E. J. P. Douzery. 2002. Rodent phylogeny and a timescale for the evolution of glires: Evidence from an extensive taxon sampling using three nuclear genes. Mol. Biol. Evol. 19:1053-1065.
    • (2002) Mol. Biol. Evol , vol.19 , pp. 1053-1065
    • Huchon, D.1    Madsen, O.2    Sibbald, M.J.J.B.3    Ament, K.4    Stanhope, M.5    Catzeflis, F.6    De Jong, W.W.7    Douzery, E.J.P.8
  • 20
    • 0001217831 scopus 로고
    • Rodent phylogeny: New data and old problems
    • M. J. Benton, ed, Clarendon Press, Oxford
    • Jaeger, J.-J. 1988. Rodent phylogeny: New data and old problems. Pages 177-199 in The phylogeny and classification of the tetrapods (M. J. Benton, ed.). Clarendon Press, Oxford.
    • (1988) The phylogeny and classification of the tetrapods , pp. 177-199
    • Jaeger, J.-J.1
  • 21
    • 0031055331 scopus 로고    scopus 로고
    • Sequence patterns indicate an enzymatic involvement in integration of mammalian retroposons
    • Jurka, J. 1997. Sequence patterns indicate an enzymatic involvement in integration of mammalian retroposons. Proc. Natl. Acad. Sci. USA 94:1872-1877.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 1872-1877
    • Jurka, J.1
  • 24
    • 0035094220 scopus 로고    scopus 로고
    • Structure and origin of a novel dimeric retroposon Bl-dlD
    • Kramerov, D. A., and N. S. Vassetzky. 2001. Structure and origin of a novel dimeric retroposon Bl-dlD. J. Mol. Evol. 52:137-143.
    • (2001) J. Mol. Evol , vol.52 , pp. 137-143
    • Kramerov, D.A.1    Vassetzky, N.S.2
  • 25
    • 28844473478 scopus 로고    scopus 로고
    • Short retroposons in eukaryotic genomes
    • Kramerov, D. A., and N. S. Vassetzky. 2005. Short retroposons in eukaryotic genomes. Int. Rev. Cytol. 247:165-221.
    • (2005) Int. Rev. Cytol , vol.247 , pp. 165-221
    • Kramerov, D.A.1    Vassetzky, N.S.2
  • 26
    • 0032927881 scopus 로고    scopus 로고
    • The evolutionary position of dormice (Gliridae) in Rodentia determined by a novel short retroposon
    • Kramerov, D., N. Vassetzky, and I. Serdobova. 1999. The evolutionary position of dormice (Gliridae) in Rodentia determined by a novel short retroposon. Mol. Biol. Evol. 16:715-717.
    • (1999) Mol. Biol. Evol , vol.16 , pp. 715-717
    • Kramerov, D.1    Vassetzky, N.2    Serdobova, I.3
  • 28
    • 0001900958 scopus 로고
    • Phylogenetic analyses of middle ear features in fossil and living rodents
    • W. P. Luckett and J.-L. Hartenberger, eds, Plenum Press, New York and London
    • Lavocat, R., and J.-P. Parent. 1985. Phylogenetic analyses of middle ear features in fossil and living rodents. Pages 333-354 in Evolutionary relationships among rodents: A multidisciplinary analysis (W. P. Luckett and J.-L. Hartenberger, eds.). Plenum Press, New York and London.
    • (1985) Evolutionary relationships among rodents: A multidisciplinary analysis , pp. 333-354
    • Lavocat, R.1    Parent, J.-P.2
  • 31
    • 0000281405 scopus 로고
    • Monophyly or polyphyly of the order Rodentia: Possible conflict between morphological and molecular interpretations
    • Luckett, W. P., and J.-L. Hartenberger. 1993. Monophyly or polyphyly of the order Rodentia: possible conflict between morphological and molecular interpretations. J. Mammal. Evol. 1:127-147.
    • (1993) J. Mammal. Evol , vol.1 , pp. 127-147
    • Luckett, W.P.1    Hartenberger, J.-L.2
  • 32
    • 20444425693 scopus 로고    scopus 로고
    • An unusual primate locus that attracted two independent Alu insertions and facilitates their transcription
    • Ludwig, A., T. S. Rozhdestvensky, V. Yu. Kuryshev, J. Schmitz and J. Brosius. 2005. An unusual primate locus that attracted two independent Alu insertions and facilitates their transcription. J. Mol. Biol. 350:200-214.
    • (2005) J. Mol. Biol , vol.350 , pp. 200-214
    • Ludwig, A.1    Rozhdestvensky, T.S.2    Kuryshev, V.Y.3    Schmitz, J.4    Brosius, J.5
  • 33
    • 4544232196 scopus 로고    scopus 로고
    • High-level phylogeny of early Tertiary rodents: Dental evidence
    • Marivaux, L., M. Vianey-Liaud, and J. J. Jaeger. 2004. High-level phylogeny of early Tertiary rodents: Dental evidence. Zool. J. Linn. Soc. 142:105-134.
    • (2004) Zool. J. Linn. Soc , vol.142 , pp. 105-134
    • Marivaux, L.1    Vianey-Liaud, M.2    Jaeger, J.J.3
  • 34
    • 0027435358 scopus 로고
    • Neutral BC1 RNA as an evolutionary marker: Guinea pig remains a rodent
    • Martignetti, J. A., and J. Brosius. 1993. Neutral BC1 RNA as an evolutionary marker: Guinea pig remains a rodent. Proc. Natl. Acad. Sci. USA 90:9698-9702.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 9698-9702
    • Martignetti, J.A.1    Brosius, J.2
  • 35
    • 0000325016 scopus 로고
    • Incisor enamel microstructure and phylogenetic interrelationships of Pedetidae and Ctenodactyloidea (Rodentia)
    • Martin, T. 1995. Incisor enamel microstructure and phylogenetic interrelationships of Pedetidae and Ctenodactyloidea (Rodentia). Berliner Geowiss. Abh. E 16:693-707.
    • (1995) Berliner Geowiss. Abh. E , vol.16 , pp. 693-707
    • Martin, T.1
  • 37
    • 0034752298 scopus 로고    scopus 로고
    • Evolutionary history of the most speciose mammals: Molecular phylogeny of muroid rodents
    • Michaux, J., A. Reyes, and F. Catzeflis. 2001. Evolutionary history of the most speciose mammals: Molecular phylogeny of muroid rodents. Mol. Biol. Evol. 18:2017-2031.
    • (2001) Mol. Biol. Evol , vol.18 , pp. 2017-2031
    • Michaux, J.1    Reyes, A.2    Catzeflis, F.3
  • 38
    • 0036365466 scopus 로고    scopus 로고
    • Molecular systematics of Sciurognathi (Rodentia): The mitochondrial cytochrome band 12S rRNA genes support the Anomaluroidea (Pedetidae and Anomaluridae)
    • Montgelard, C, S. Bentz, C. Tirard, O. Verneau, and F. M. Catzeflis. 2002. Molecular systematics of Sciurognathi (Rodentia): The mitochondrial cytochrome band 12S rRNA genes support the Anomaluroidea (Pedetidae and Anomaluridae). Mol. Phylogenet. Evol. 22:220-233.
    • (2002) Mol. Phylogenet. Evol , vol.22 , pp. 220-233
    • Montgelard, C.1    Bentz, S.2    Tirard, C.3    Verneau, O.4    Catzeflis, F.M.5
  • 41
    • 0002542735 scopus 로고
    • Family Muridae
    • D. E. Wilson, and D. M. Reeder, eds, Smithsonian Institution Press, Washington and London
    • Musser, G. M., and M. D. Carleton. 1993. Family Muridae. Pages 501-756 in Mammal species of the world: A taxonomic and geographic reference (D. E. Wilson, and D. M. Reeder, eds.). Smithsonian Institution Press, Washington and London.
    • (1993) Mammal species of the world: A taxonomic and geographic reference , pp. 501-756
    • Musser, G.M.1    Carleton, M.D.2
  • 42
    • 0000987389 scopus 로고    scopus 로고
    • Higher-level systematics of rodents (Mammalia, Rodentia): Evidence from the mitochondrial 12S rRNA gene
    • Nedbal, M. A., R. L. Honeycutt, and D. A. Schlitter. 1996. Higher-level systematics of rodents (Mammalia, Rodentia): Evidence from the mitochondrial 12S rRNA gene. J. Mammal. Evol. 3:201-237.
    • (1996) J. Mammal. Evol , vol.3 , pp. 201-237
    • Nedbal, M.A.1    Honeycutt, R.L.2    Schlitter, D.A.3
  • 43
    • 0033621101 scopus 로고    scopus 로고
    • Phylogenetic relationships among cetartiodactyls based on insertions of short and long interspersed elements: Hippopotamuses are the closest extant relatives of whales
    • Nikaido, M., A. P. Rooney, and N. Okada. 1999. Phylogenetic relationships among cetartiodactyls based on insertions of short and long interspersed elements: Hippopotamuses are the closest extant relatives of whales. Proc. Natl. Acad. Sci. USA 96:10261-10266.
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 10261-10266
    • Nikaido, M.1    Rooney, A.P.2    Okada, N.3
  • 44
    • 0031301965 scopus 로고    scopus 로고
    • Rodent monophyly: Pitfalls of molecular phylogenies
    • Philippe, H. 1997. Rodent monophyly: Pitfalls of molecular phylogenies. J. Mol. Evol. 45:712-715.
    • (1997) J. Mol. Evol , vol.45 , pp. 712-715
    • Philippe, H.1
  • 45
    • 0026749958 scopus 로고
    • Origin of the Alu family: A family of Alu-like monomers gave birth to the left and the right arms of the Alu elements
    • Quentin, Y. 1992. Origin of the Alu family: A family of Alu-like monomers gave birth to the left and the right arms of the Alu elements. Nucleic Acids Res. 20:3397-3401.
    • (1992) Nucleic Acids Res , vol.20 , pp. 3397-3401
    • Quentin, Y.1
  • 46
    • 0028291115 scopus 로고
    • A master sequence related to a free left Alu monomer (FLAM) at the origin of the Bl family in rodent genomes
    • Quentin, Y. 1994. A master sequence related to a free left Alu monomer (FLAM) at the origin of the Bl family in rodent genomes. Nucleic Acids Res. 22:2222-2227.
    • (1994) Nucleic Acids Res , vol.22 , pp. 2222-2227
    • Quentin, Y.1
  • 47
    • 0031947856 scopus 로고    scopus 로고
    • Complete mitochondrial DNA sequence of the fat dormouse, Glis glis: Further evidence of rodent paraphyly
    • Reyes, A., G. Pesole, and C. Saccone. 1998. Complete mitochondrial DNA sequence of the fat dormouse, Glis glis: Further evidence of rodent paraphyly. Mol. Biol. Evol. 15:499-505.
    • (1998) Mol. Biol. Evol , vol.15 , pp. 499-505
    • Reyes, A.1    Pesole, G.2    Saccone, C.3
  • 48
    • 3242656981 scopus 로고    scopus 로고
    • Primate jumping genes elucidate strepsirrhine phylogeny
    • Roos, C, J. Schmitz, and H. Zischler. 2004. Primate jumping genes elucidate strepsirrhine phylogeny. Proc. Natl. Acad. Sci. USA 101:10650-10654.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 10650-10654
    • Roos, C.1    Schmitz, J.2    Zischler, H.3
  • 49
    • 0037008835 scopus 로고    scopus 로고
    • Independent integration of rodent identifier (ID) elements into orthologous sites of some RT6 alleles of Rattus norvegicus and Rattus rattus
    • Rothenburg, S., M. Eiben, F. Koch-Nolte, and F. Haag. 2002. Independent integration of rodent identifier (ID) elements into orthologous sites of some RT6 alleles of Rattus norvegicus and Rattus rattus. J. Mol. Evol. 55:251-259.
    • (2002) J. Mol. Evol , vol.55 , pp. 251-259
    • Rothenburg, S.1    Eiben, M.2    Koch-Nolte, F.3    Haag, F.4
  • 52
    • 0035108258 scopus 로고    scopus 로고
    • SINE insertions in cladistic analyses and the phylogenetic affiliations of Tarsius bancanus to other primates
    • Schmitz, J., M. Ohme, and H. Zischler. 2001. SINE insertions in cladistic analyses and the phylogenetic affiliations of Tarsius bancanus to other primates. Genetics 157:777-784.
    • (2001) Genetics , vol.157 , pp. 777-784
    • Schmitz, J.1    Ohme, M.2    Zischler, H.3
  • 53
    • 9244232873 scopus 로고    scopus 로고
    • Primate phylogeny: Molecular evidence from retroposons
    • Schmitz, J., C. Roos, and H. Zischler. 2005. Primate phylogeny: Molecular evidence from retroposons. Cytogenet Genome Res. 108:26-37.
    • (2005) Cytogenet Genome Res , vol.108 , pp. 26-37
    • Schmitz, J.1    Roos, C.2    Zischler, H.3
  • 54
    • 0031890714 scopus 로고    scopus 로고
    • Short retroposons of the B2 superfamily: Evolution and application for the study of rodent phylogeny
    • Serdobova, I. M., and D. A. Kramerov. 1998. Short retroposons of the B2 superfamily: Evolution and application for the study of rodent phylogeny. J. Mol. Evol. 46:202-214.
    • (1998) J. Mol. Evol , vol.46 , pp. 202-214
    • Serdobova, I.M.1    Kramerov, D.A.2
  • 55
    • 0033964296 scopus 로고    scopus 로고
    • SINE insertions: Powerful tools for molecular systematics
    • Shedlock, A. M., and N. Okada. 2000. SINE insertions: Powerful tools for molecular systematics. Bioessays 22:148-160.
    • (2000) Bioessays , vol.22 , pp. 148-160
    • Shedlock, A.M.1    Okada, N.2
  • 56
    • 4544222472 scopus 로고    scopus 로고
    • SINEs of speciation: Tracking lineages with retroposons
    • Shedlock, A. M., K. Takahashi, and N. Okada. 2004. SINEs of speciation: Tracking lineages with retroposons. Trends Ecol. Evol. 19:545-553.
    • (2004) Trends Ecol. Evol , vol.19 , pp. 545-553
    • Shedlock, A.M.1    Takahashi, K.2    Okada, N.3
  • 57
    • 0037355139 scopus 로고    scopus 로고
    • Molecular cladistic markers in New World monkey phylogeny (Platyrrhini, Primates)
    • Singer, S. S., J. Schmitz, C. Schwiegk, and H. Zischler. 2003. Molecular cladistic markers in New World monkey phylogeny (Platyrrhini, Primates). Mol. Phylogenet. Evol. 26:490-501.
    • (2003) Mol. Phylogenet. Evol , vol.26 , pp. 490-501
    • Singer, S.S.1    Schmitz, J.2    Schwiegk, C.3    Zischler, H.4
  • 59
    • 4344665270 scopus 로고    scopus 로고
    • Phylogeny and divergence-date estimates of rapid radiations in muroid rodents based on multiple nuclear genes
    • Steppan, S. J., R. M. Adkins, and J. Anderson. 2004. Phylogeny and divergence-date estimates of rapid radiations in muroid rodents based on multiple nuclear genes. Syst. Biol. 53:533-553.
    • (2004) Syst. Biol , vol.53 , pp. 533-553
    • Steppan, S.J.1    Adkins, R.M.2    Anderson, J.3
  • 60
    • 0002618746 scopus 로고    scopus 로고
    • Are guinea pigs rodents? The importance of adequate models in molecular phylogenetics
    • Sullivan, J., and D. L. Swofford. 1997. Are guinea pigs rodents? The importance of adequate models in molecular phylogenetics. J. Mammal. Evol. 4:77-86.
    • (1997) J. Mammal. Evol , vol.4 , pp. 77-86
    • Sullivan, J.1    Swofford, D.L.2
  • 61
    • 66249106787 scopus 로고    scopus 로고
    • Swofford, D.L., 2000. PAUP: Phylogenetic analysis using parsimony. Sinauer Associates, Sunderland, Massachusetts. Tatout, C, L. La vie, and J. M. Deragon. 1998. Similar target site selection occurs in integration of plant and mammalian retroposons. J. Mol. Evol. 47:463-170.
    • Swofford, D.L., 2000. PAUP: Phylogenetic analysis using parsimony. Sinauer Associates, Sunderland, Massachusetts. Tatout, C, L. La vie, and J. M. Deragon. 1998. Similar target site selection occurs in integration of plant and mammalian retroposons. J. Mol. Evol. 47:463-170.
  • 62
    • 0032734357 scopus 로고    scopus 로고
    • SINE insertions as clade markers for wild crucifer species
    • Tatout, C, S. Warwick, A. Lenoir, and J.-M. Deragon. 1999. SINE insertions as clade markers for wild crucifer species. Mol. Biol. Evol. 16:1614-1621.
    • (1999) Mol. Biol. Evol , vol.16 , pp. 1614-1621
    • Tatout, C.1    Warwick, S.2    Lenoir, A.3    Deragon, J.-M.4
  • 63
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTALJC windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., T. J. Gibson, F. Plewniak, F. Jeanmougin and D. G. Higgins. 1997. The CLUSTALJC windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25:4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 64
    • 0002721768 scopus 로고
    • Ueber das System der Nagetiere: Eine phylogenetische studie.
    • Tullberg, T. 1899. Ueber das System der Nagetiere: Eine phylogenetische studie. Nova Acta Reg. Soc. Sci. Upsala Ser. 3 18:1-514.
    • (1899) Nova Acta Reg. Soc. Sci. Upsala Ser , vol.3 , Issue.18 , pp. 1-514
    • Tullberg, T.1
  • 65
    • 24344509193 scopus 로고    scopus 로고
    • Genomic deletions and precise removal of transposable elements mediated by short identical DNA segments in primates
    • van de Lagemaat, L. N., L. Gagnier, P. Medstrand, and D. L. Mager. 2005. Genomic deletions and precise removal of transposable elements mediated by short identical DNA segments in primates. Genome Res. 15:1243-1249.
    • (2005) Genome Res , vol.15 , pp. 1243-1249
    • van de Lagemaat, L.N.1    Gagnier, L.2    Medstrand, P.3    Mager, D.L.4
  • 66
    • 0000599391 scopus 로고
    • Possible evolutionary relationships among Eocene and Lower Oligocene rodents of Asia, Europe and North America
    • W. P. Luckett, and J.-L. Hartenberger, eds, Plenum Press, New York and London
    • Vianey-Liaud, M. 1985. Possible evolutionary relationships among Eocene and Lower Oligocene rodents of Asia, Europe and North America. Pages 277-309 in Evolutionary relationships among rodents: A multidisciplinary analysis (W. P. Luckett, and J.-L. Hartenberger, eds.). Plenum Press, New York and London.
    • (1985) Evolutionary relationships among rodents: A multidisciplinary analysis , pp. 277-309
    • Vianey-Liaud, M.1
  • 67
    • 0035752767 scopus 로고    scopus 로고
    • A phylogenetic foundation for comparative mammalian genomics. Genome Inform. Ser
    • Waddell, P. J., H. Kishino, and R. Ota. 2001. A phylogenetic foundation for comparative mammalian genomics. Genome Inform. Ser. Workshop Genome Inform. 12:141-154.
    • (2001) Workshop Genome Inform , vol.12 , pp. 141-154
    • Waddell, P.J.1    Kishino, H.2    Ota, R.3
  • 68
    • 1542563409 scopus 로고    scopus 로고
    • Waterston, R. H, K. Lindblad-Toh, E. Birney, J. Rogers, J. F. Abril, P. Agarwal, R. Agarwala, R. Ainscough, M. Alexandersson, P. An, S. E. Antonarakis, J. Attwood, R. Baertsch, J. Bailey, K. Barlow, S. Beck, E. Berry, B. Birren, T. Bloom, P. Bork, M. Botcherby, N. Bray, M. R. Brent, D. G. Brown, S. D. Brown, C. Bult, J. Burton, J. Butler, R. D. Campbell, P. Carninci, S. Cawley, F. Chiaromonte, A. T. Chinwalla, D. M. Church, M. Clamp, C. Clee, F. S. Collins, L. L. Cook, R. R. Copley, A. Coulson, O. Couronne, J. Cuff, V. Curwen, T. Cutts, M. Daly, R. David, J. Davies, K. D. Delehaunty, J. Deri, E. T. Dermitzakis, C. Dewey, N. J. Dickens, M. Diekhans, S. Dodge, I. Dubchak, D. M. Dunn, S. R. Eddy, L. Elnitski, R. D. Ernes, P. Eswara, E. Eyras, A. Felsenfeld, G. A. Fewell, P. Flicek, K. Foley, W. N. Frankel, L. A. Fulton, R. S. Fulton, T. S. Furey, D. Gage, R. A. Gibbs, G. Glusman, S. Gnerre, N. Goldman, L. Goodstadt, D. Grafham, T. A. Graves, E. D. Green, S. Gregory, R. Guigo, M. Guyer, R
    • Waterston, R. H., K. Lindblad-Toh, E. Birney, J. Rogers, J. F. Abril, P. Agarwal, R. Agarwala, R. Ainscough, M. Alexandersson, P. An, S. E. Antonarakis, J. Attwood, R. Baertsch, J. Bailey, K. Barlow, S. Beck, E. Berry, B. Birren, T. Bloom, P. Bork, M. Botcherby, N. Bray, M. R. Brent, D. G. Brown, S. D. Brown, C. Bult, J. Burton, J. Butler, R. D. Campbell, P. Carninci, S. Cawley, F. Chiaromonte, A. T. Chinwalla, D. M. Church, M. Clamp, C. Clee, F. S. Collins, L. L. Cook, R. R. Copley, A. Coulson, O. Couronne, J. Cuff, V. Curwen, T. Cutts, M. Daly, R. David, J. Davies, K. D. Delehaunty, J. Deri, E. T. Dermitzakis, C. Dewey, N. J. Dickens, M. Diekhans, S. Dodge, I. Dubchak, D. M. Dunn, S. R. Eddy, L. Elnitski, R. D. Ernes, P. Eswara, E. Eyras, A. Felsenfeld, G. A. Fewell, P. Flicek, K. Foley, W. N. Frankel, L. A. Fulton, R. S. Fulton, T. S. Furey, D. Gage, R. A. Gibbs, G. Glusman, S. Gnerre, N. Goldman, L. Goodstadt, D. Grafham, T. A. Graves, E. D. Green, S. Gregory, R. Guigo, M. Guyer, R. C. Hardison, D. Haussler, Y. Hayashizaki, L. W. Hillier, A. Hinrichs, W. Hlavina, T. Holzer, F. Hsu, A. Hua, T. Hubbard, A. Hunt, I. Jackson, D. B. Jaffe, L. S. Johnson, M. Jones, T. A. Jones, A. Joy, M. Kamal, E. K. Karlsson, et al. 2002. Initial sequencing and comparative analysis of the mouse genome. Nature 420:520-562.
  • 70
    • 0000378875 scopus 로고
    • Evidence for higher rates of nucleotide substitution in rodents than in man
    • Wu, C.-I., and W.-H. Li. 1985. Evidence for higher rates of nucleotide substitution in rodents than in man. Proc. Natl. Acad. Sci. USA 82:1741-1745.
    • (1985) Proc. Natl. Acad. Sci. USA , vol.82 , pp. 1741-1745
    • Wu, C.-I.1    Li, W.-H.2
  • 72
    • 0030058856 scopus 로고    scopus 로고
    • Mosaic evolution of rodent Bl elements
    • Zietkiewicz, E., and D. Labuda. 1996. Mosaic evolution of rodent Bl elements. J. Mol. Evol. 42:66-72.
    • (1996) J. Mol. Evol , vol.42 , pp. 66-72
    • Zietkiewicz, E.1    Labuda, D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.