Suppressed expression of genes involved in transcription and translation in in vitro compared with in vivo cultured bovine embryos

Reproduction

Volumn 131, Issue 4, 2006, Pages 651-660

  Corcoran, D ^a   Fair, T ^a   Park, S ^a   Rizos, D ^a   Patel, O V ^b   Smith, G W ^b   Coussens, P M ^b   Ireland, J J ^b   Boland, M P ^a   Evans, A C O ^a   Lonergan, Pat ^a  

^a UNIVERSITY COLLEGE DUBLIN   (Ireland)

^b MICHIGAN STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA; MESSENGER RNA;

ARTICLE; BLASTOCYST; COW; DNA HYBRIDIZATION; DNA MICROARRAY; DOWN REGULATION; EMBRYO; EMBRYO CULTURE; EXPRESSED SEQUENCE TAG; GENE EXPRESSION REGULATION; GENE IDENTIFICATION; IN VITRO STUDY; IN VIVO STUDY; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS; REAL TIME POLYMERASE CHAIN REACTION; TRANSCRIPTION REGULATION; TRANSLATION REGULATION;

ANIMALS; BASE SEQUENCE; BLASTOCYST; CATTLE; DNA PRIMERS; EMBRYONIC DEVELOPMENT; EXPRESSED SEQUENCE TAGS; FEMALE; FERTILIZATION IN VITRO; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, DEVELOPMENTAL; IN SITU HYBRIDIZATION; MOLECULAR SEQUENCE DATA; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PREGNANCY; PROTEIN BIOSYNTHESIS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, MESSENGER; TRANSCRIPTION, GENETIC;

BOVINAE;

EID: 33646233777     PISSN: 14701626     EISSN: None     Source Type: Journal    
DOI: 10.1530/rep.1.01015     Document Type: Article

References (62)

1. Abd EI Razek IM, Charpigny G, Kodja S, Marquant-Le Guienne B, Mermillod P, Guyader-loly C & Humblot P 2000 Differences in lipid composition between in vivo- and in vitro-produced bovine embryos. Theriogenology 53 346.
2. Ball PJH 1997 Late embryo and early fetal mortality in the cow. Animal Breeding Abstracts 65 167-175.
3. Bianchi ME & Beltrame M 2000 Upwardly mobile proteins. Workshop: the role of HMG proteins in chromatin structure, gene expression and neoplasia. EMBO Report 1 109-114.
4. Bilodeau-Goeseels S & Schultz GA 1997 Changes in ribosomal ribonucleic acid content within in vitro-produced bovine embryos. Biology of Reproduction 56 1323-1329.
5. Boni R, Tosti E, Roviello S & Dale B 1999 Intracellular communication in in vivo- and in vitro-produced bovine embryos. Biology of Reproduction 61 1050-1055.
6. Brevini-Gandolfi T, Favetta LA, Lonergan P & Gandolfi F 2000 The mechanism regulating maternal mRNA stability and translation is affected in bovine embryos with low developmental competence. Theriogenology 53 2 68.
7. Burgering BM & Kops GJ 2002 Cell cycle and death control: long live Forkheads. Trends in Biochemical Science 27 352-360.
8. Cleveland W & Grosse E 1991 Computational methods of local regression. Statistics and Computing 1 47-62.
9. Crosier AE, Farin PW, Dykstra MJ, Alexander JE & Farin CE 2000 Ultrastructural morphometry of bovine compact morulae produced in vivo or in vitro. Biology of Reproduction 62 1459-1465.
10. Crosier AE, Farin PW, Dykstra MJ, Alexander JE & Farin CE 2001 Ultrastructural morphometry of bovine blastocyst produced in vivo or in vitro. Biology of Reproduction 64 1375-1385.
11. Crosier AE, Farin CE, Rodriguez KF, Blondin P, Alexander JE & Farin PW 2002 Development of skeletal muscle and expression of candidate genes in bovine fetuses from embryos produced in vivo or in vitro. Biology of Reproduction 67 401-408.
12. Dean L & McEntyre J 2004 In The Genetic Landscape of Diabetes. www.ncbi.nlm.nih.gov/books/.
13. Denis CL & Chen J 2003 The CCR4-NOT complex plays diverse roles in mRNA metabolism. Progress in Nucleic Acid Research and Molecular Biology 73 221-250.
14. Duby RT, Hill JL, O'Callaghan D, Overstrom EW & Boland MP 1997 Changes induced in the bovine zona pellucida by ovine and bovine oviducts. Theriogenology 47 332.
15. Edmonds D, Lindsay K, Miller J, Williamson E & Wood P 1982 Early embryonic mortality in women. Fertility and Sterility 38 447-453.
16. Enright BP, Lonergan P, Dinnyes A, Fair T, Ward FA, Yang X & Boland MP 2000 Culture of in vitro produced bovine zygotes in vitro vs in vivo: implications for early embryo development and quality. Theriogenology 54 659-673.
17. Evans AC, Ireland JL, Winn ME, Lonergan P, Smith GW, Coussens PM & Ireland JJ 2004 Identification of genes involved in apoptosis and dominant follicle development during follicular waves in cattle. Biology of Reproduction 70 1475-1484.
18. Fair T, Lonergan P, Dinnyes A, Cottell D, Hyttel P, Ward FA & Boland MP 2001 Ultrastructure of bovine blastocysts following cryopreservation: effect of method of embryo production on blastocyst quality. Molecular Reproduction and Development 58 186-195.
19. Fan Z, Beresford PJ, Zhang D & Lieberman J 2002 HMG2 interacts with the nucleosome assembly protein SET and is a target of the cytotoxic T-lymphocyte protease granzyme A. Molecular Cell Biology 22 2810-2820.
20. Feng Q, Wang H, Ng HH, Erdjument-Bromage H, Tempst P, Struhl K & Zhang Y 2002 Methylation of H3-lysine 79 is mediated by a new family of HMTases without a SET domain. Current Biology 12 1052-1058.
21. Galli C & Lazzari G 1996 Practical aspects of IVM/IVF in cattle. Animal Reproduction Science 42 371-379.
22. Gomes LI, Silva RL, Stolf BS, Cristo EB, Hirata R, Soares FA, Reis LF, Neves EJ & Carvalho AF 2003 Comparative analysis of amplified and nonamplified RNA for hybridization in cDNA microarray. Analytical Biochemistry 321 244-251.
23. Hasler JF, Henderson WB, Hurtgen PJ, Jin ZQ McCauley AD, Mower SA, Neely B, Shuey LS, Stokes JE & Trimmer SA 1995 Production, freezing and transfer of bovine IVF embryos and subsequent calving results. Theriogenology 43 141-152.
24. Hosaka T, Biggs WH 3rd, Tieu D, Boyer AD, Varki NM, Cavenee WK & Arden KC 2004 Disruption of forkhead transcription factor (FOXO) family members in mice reveals their functional diversification. PNAS 101 2975-2980.
25. Jenson SD, Robetorye RS, Bohling SD, Schumacher JA, Morgan JW, Lim MS & Elenitoba-Johnson KS 2003 Validation of cDNA microarray gene expression data obtained from linearly amplified RNA. Molecular Pathology 56 307-312.
26. Jeong YJ, Choi HW, Shin HS, Cui XS, Kim NH, Gerton GL & Jun JH 2005 Optimization of real time RT-PCR methods for the analysis of gene expression in mouse eggs and preimplantation embryos. Molecular Reproduction and Development 71 284-289.
27. Khurana NK & Niemann H 2000 Energy metabolism in preimplantation bovine embryos derived in vitro or in vivo. Biology of Reproduction 62 847-856.
28. Kouzarides T 2002 Histone methylation in transcriptional control. Current Opinions in Genetic Development 12 198-209.
29. Kuhn U & Wahle E 2004 Structure and function of poly(A) binding proteins. Biochimica et Biophysica Acta 1678 67-84.
30. Lazzari G, Wrenzycki C, Herrmann D, Duchi R, Kruip T, Niemann H & Galli C 2002 Cellular and molecular deviations in bovine in vitro-produced embryos are related to the large offspring syndrome. Biology of Reproduction 67 767-775.
31. -ΔΔCT method. Methods 25 402-408.
32. Lonergan P, Rizos D, Gutierrez-Adan A, Fair T & Boland MP 2003a Oocyte and embryo quality: effect of origin, culture conditions and gene expression patterns. Reproduction in Domestic Animals 38 259-267.
33. Lonergan P, Rizos D, Gutierrez-Adan A, Moreira PM, Pintado B, de la Fuente J & Boland MP 2003b Temporal divergence in the pattern of messenger RNA expression in bovine embryos cultured from the zygote to blastocyst stage in vitro or in vivo. Biology of Reproduction 69 1424-1431.
34. Lonergan P, Pedersen HG, Rizos D, Greve T; Thomsen PD, Fair T, Evans A & Boland MP 2004 Effect of the post-fertilization culture environment on the incidence of chromosome aberrations in bovine blastocysts. Biology of Reproduction 71 1096-1100.
35. Medema RH, Kops GJ, Bos JL & Burgering BM 2000 AFX-like Forkhead transcription factors mediate cell-cycle regulation by Ras and PKB through p27kip1. Nature 404 782-787.
36. Memili E & First NL 2000 Zygotic and embryonic gene expression in cow: a review of timing and mechanisms of early gene expression as compared with other species. Zygote 8 87-96.
37. Nilsson J, Sengupta J, Frank J & Nissen P 2004 Regulation of eukaryotic translation by the RACK1 protein: a platform for signalling molecules on the ribosome. EMBO Reports 5 1137-1141.
38. O'Brien RM, Streeper IRS, Ayala JE, Stadelmaier BT & Hornbuckle LA 2001 Insulin-regulated gene expression. Biochemical Society Transactions 29 552-558.
39. Ohta A & Sitkovsky M 2001 Role of G-protein-coupled adenosine receptors in downregulation of inflammation and protection from tissue damage. Nature 414 916-920.
40. Park SE, Xu J, Frolova A, Liao L, O'Malley BW & Katzenellenbogen BS 2005 Genetic deletion of the repressor of estrogen receptor activity (REA) enhances the response to estrogen in target tissues in vivo. Molecular and Cellular Biology 25 1989-1999.
41. Patel OV, Suchyta SP, Sipkovsky SS, Yao J, Ireland JJ, Coussens PM & Smith GW 2005 Validation and application of a high fidelity mRNA linear amplification procedure for profiling gene expression. Veterinary Immunology and Immunopathology 105 331-342.
42. Peters AR 1996 Embryo mortality in the cow. Animal Breeding Abstracts 64 587-598.
43. Piko L & Clegg KB 1982 Quantitative changes in total RNA, total poly(A), and ribosomes in early mouse embryos. Developmental Biology 89 362-378.
44. Pollard JW & Leibo SP 1994 Chilling sensitivity of mammalian embryos. Theriogenology 4l 101-106.
45. Ponka P 1999 Cell biology of heme. American Journal of Medical Science 318 241-256.
46. Rinaudo P & Schultz RM 2004 Effects of embryo culture on global pattern of gene expression in preimplantation mouse embryos. Reproduction 128 301-311.
47. Rizos D, Lonergan P, Ward F, Duffy P & Boland MP 2002a Consequences of bovine oocyte maturation, fertilization or early embryo development in vitro versus in vivo: implications for blastocyst yield and blastocyst quality. Molecular Reproduction and Development 61 234-248.
48. Rizos D, Fair T, Papadopoulos S, Boland MP & Lonergan P 2002b Developmental, qualitative, and ultrastructural differences between ovine and bovine embryos produced in vivo or in vitro. Molecular Reproduction and Development 62 320-327.
49. Rizos D, Lonergan P, Boland MP, Arroyo-Garcia R, Pintado B, de la Fuente J & Gutierrez-Adan A 2002c Analysis of differential messenger RNA expression between bovine blastocysts produced in different culture systems: implications for blastocyst quality. Biology of Reproduction 66 589-595.
50. Rizos D, Gutierrez-Adan A, Perez-Garnelo S, De La Fuente J, Boland MP & Lonergan P 2003 Bovine embryo culture in the presence or absence of serum: implications for blastocyst development, cryotolerance, and messenger RNA expression. Biology of Reproduction 68 236-243.
51. Roozemond RC 1976 Ultramicrochemical determination of nucleic acids in individual cells using the Zeiss UMSP-I microspectrophotometer. Application to isolated rat hepatocytes of different ploidy classes. Histochemistry,fournal 8 625-638.
52. Rottenberg S, Schmuckli-Maurer J, Grimm S, Heussler VT & Dobbelaere DA 2002 Characterization of the bovine IκB kinases (IKK)α and IKKβ, the regulatory subunit NEMO and their substrate IKBα. Gene 299 293-300.
53. Sreenan J, Diskin M & Morris D 2001 Embryo survival rate in cattle: a major limitation to the achievement of high fertility. In Fertility in the High-Yielding Dairy Cow, pp 93-104. BSAS Occasional Publication 26, Scotland, UK: British Society of Animal Science.
54. Tesfaye D, Ponsuksili S, Wimmers K, Gilles M & Schellander K 2004 A comparative expression analysis of gene transcripts in post-fertilization developmental stages of bovine embryos produced in vitro or in vivo. Reproduction in Domestic Animals 39 396-404.
55. Thompson JG 2000 In vitro culture and embryo metabolism of cattle and sheep embryos - a decade of achievement. Animal Reproductive Science 60-61 263-275.
56. Vigneault C, McGraw S, Massicotte L & Sirard MA 2004 Transcription factor expression patterns in bovine in vitro-derived embryos prior to maternal-zygotic transition. Biology of Reproduction 70 1701-1709.
57. Vincent S, Grady R, Shaklai N, Snider J & Muller-Eberhard U 1988 The influence of heme-binding proteins in heme-catalyzed oxidations. Archives of Biochemistry and Biophysics 265 539-550.
58. Viuff D, Rickords L, Offenberg H, Hyttel P, Avery B, Greve T, Olsaker I, Williams JL, Callesen H & Thomsen PD 1999 A high proportion of bovine blastocysts produced in vitro are mixoploid. Biology of Reproduction 60 1273-1278.
59. Walter JH, Roberts RE, Besley GT, Wraith JE, Cleary MA, Holton JB & MacFaul R 1999 Generalised uridine diphosphate galactose-4-epimerase deficiency. Archives of Diseases in Childhood 80 374-376.
60. Wang E, Miller LD, Ohnmacht GA, Liu ET & Marincola FM 2000 High-fidelity mRNA amplification for gene profiling. Nature Biotechnology 18 457-459.
61. Wang S, Chen J, Zhang Z, Gu S, Ji C, Tang R, Ying K, Xie Y & Mao Y 2003 Cloning, expression and genomic structure of a novel human GNB2L1 gene, which encodes a receptor of activated protein kinase C (RACK). Molecular Biology Report 30 53-60.
62. Wrenzycki C, Herrmann D, Lucas-Hahn A, Korsawe K, Lemme E & Niemann H 2005 Messenger RNA expression patterns in bovine embryos derived from in vitro procedures and their implications for development. Reproduction, Fertility and Development 17 23-35.