-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul,S.F. et al. (1997) Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res., 25, 3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
-
3
-
-
0033986922
-
The quest to deduce protein function from sequence: The role of pattern databases
-
Attwood,T.K. (2000) The quest to deduce protein function from sequence: the role of pattern databases. Int. J. Biochem. Cell Biol., 32, 139-155.
-
(2000)
Int. J. Biochem. Cell Biol.
, vol.32
, pp. 139-155
-
-
Attwood, T.K.1
-
4
-
-
0036169141
-
Machine learning of functional class from phenotype data
-
Clare,A. and King,R.D. (2002) Machine learning of functional class from phenotype data. Bioinformatics, 18, 160-166.
-
(2002)
Bioinformatics
, vol.18
, pp. 160-166
-
-
Clare, A.1
King, R.D.2
-
5
-
-
26944451451
-
Data mining the yeast genome in a lazy functional language
-
Lecture Notes in Computer Science 2562 Springer 2003, New Orleans, USA
-
Clare,A. and King,R.D. (2003a) Data mining the yeast genome in a lazy functional language. In Practical Aspects of Declarative Languages (PADL'03), Lecture Notes in Computer Science 2562 Springer 2003, New Orleans, USA.
-
(2003)
Practical Aspects of Declarative Languages (PADL'03)
-
-
Clare, A.1
King, R.D.2
-
6
-
-
6944251719
-
Predicting gene function in it Saccharomyces cerevisiae
-
Clare,A. and King,R.D. (2003b) Predicting gene function in it Saccharomyces cerevisiae. Bioinformatics, 19, ii42-ii49.
-
(2003)
Bioinformatics
, vol.19
-
-
Clare, A.1
King, R.D.2
-
8
-
-
0028275403
-
Sequence similarity of putative transposases links the maize Mutator autonomous element and a group of bacterial insertion sequences
-
Eisen,J. et al. (1994) Sequence similarity of putative transposases links the maize Mutator autonomous element and a group of bacterial insertion sequences. Nucleic Acids Res., 22, 2634-2636.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 2634-2636
-
-
Eisen, J.1
-
9
-
-
0035109680
-
Functional and structural genomics using PEDANT
-
Frishman,D. et al. (2001) Functional and structural genomics using PEDANT. Bioinformatics, 17, 44-57.
-
(2001)
Bioinformatics
, vol.17
, pp. 44-57
-
-
Frishman, D.1
-
10
-
-
0034069495
-
Gene Ontology: Tool for the unification of biology
-
The Gene Ontology Consortium
-
The Gene Ontology Consortium (2000), Gene Ontology: Tool for the unification of biology. Nat. Genet., 25, 25-29.
-
(2000)
Nat. Genet.
, vol.25
, pp. 25-29
-
-
-
11
-
-
0035798406
-
Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure
-
Gough,J. et al. (2001) Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure. J. Mol. Biol., 313, 903-919.
-
(2001)
J. Mol. Biol.
, vol.313
, pp. 903-919
-
-
Gough, J.1
-
12
-
-
4444301196
-
Phylogenetic profiling of the Arabidopsis thaliana proteome: What proteins distinguish plants from other organisms?
-
Gutiérrez,R.A. et al. (2004) Phylogenetic profiling of the Arabidopsis thaliana proteome: What proteins distinguish plants from other organisms? Genome Biol., 5, R53.
-
(2004)
Genome Biol.
, vol.5
-
-
Gutiérrez, R.A.1
-
13
-
-
0035229817
-
Predicting gene function from gene expressions and ontologies
-
Hvidsten,T.R. et al. (2001) Predicting gene function from gene expressions and ontologies. Pac. Syrup. Biocomput., 299-310.
-
(2001)
Pac. Syrup. Biocomput.
, pp. 299-310
-
-
Hvidsten, T.R.1
-
14
-
-
0034160040
-
On the optimization of classes for the assignment of unidentified reading frames in functional genomics programmes: The need for machine learning
-
Kell,D. and King,R. (2000) On the optimization of classes for the assignment of unidentified reading frames in functional genomics programmes: The need for machine learning. Trends Biotechnol., 18, 93-98.
-
(2000)
Trends Biotechnol.
, vol.18
, pp. 93-98
-
-
Kell, D.1
King, R.2
-
15
-
-
0000875752
-
Accurate prediction of protein functional class in the M.tuberculosis and E.coli genomes using data mining
-
King,R. et al. (2000) Accurate prediction of protein functional class in the M.tuberculosis and E.coli genomes using data mining. Comp. Funct. Genomics, 17, 283-293.
-
(2000)
Comp. Funct. Genomics
, vol.17
, pp. 283-293
-
-
King, R.1
-
16
-
-
0035006162
-
The utility of different representations of protein sequence for predicting functional class
-
King,R. et al. (2001) The utility of different representations of protein sequence for predicting functional class. Bioinformatics, 17, 445-454.
-
(2001)
Bioinformatics
, vol.17
, pp. 445-454
-
-
King, R.1
-
17
-
-
0034592764
-
Genome scale prediction of protein functional class from sequence using data mining
-
ACM, Boston, USA
-
King,R., Karwath,A., Clare,A. and Dehaspe,L. (2000) Genome scale prediction of protein functional class from sequence using data mining. In Proceedings of the ACM International Conference KDD 2000, ACM, Boston, USA.
-
(2000)
Proceedings of the ACM International Conference KDD 2000
-
-
King, R.1
Karwath, A.2
Clare, A.3
Dehaspe, L.4
-
18
-
-
2442696474
-
Confirmation of data mining based predictions of protein function
-
King,R.D. et al. (2004) Confirmation of data mining based predictions of protein function. Bioinformatics, 20, 1110-1118.
-
(2004)
Bioinformatics
, vol.20
, pp. 1110-1118
-
-
King, R.D.1
-
19
-
-
0033831542
-
Cloning of the SNG1 gene of Arabidopsis reveals a role for a serine carboxypeptidase-like protein as an acyltransferase in secondary metabolism
-
Lehfeldt,C. et al. (2000) Cloning of the SNG1 gene of Arabidopsis reveals a role for a serine carboxypeptidase-like protein as an acyltransferase in secondary metabolism. Plant Cell, 12, 1295-1306.
-
(2000)
Plant Cell
, vol.12
, pp. 1295-1306
-
-
Lehfeldt, C.1
-
21
-
-
0033523854
-
A combined algorithm for ?genome-wide prediction of protein function
-
Marcotte,E. et al. (1999) A combined algorithm for ?genome-wide prediction of protein function. Nature, 402, 83-86.
-
(1999)
Nature
, vol.402
, pp. 83-86
-
-
Marcotte, E.1
-
22
-
-
0033933636
-
Cascaded multiple classifiers for secondary structure prediction
-
Ouali,M. and King,R.D. (2000) Cascaded multiple classifiers for secondary structure prediction. Protein Sci., 9, 1162-1176.
-
(2000)
Protein Sci.
, vol.9
, pp. 1162-1176
-
-
Ouali, M.1
King, R.D.2
-
23
-
-
0034818556
-
Gene functional classification from heterogenous data
-
Pavlidis,P., Weston,J., Cai,J. and Grundy,W. (2001) Gene functional classification from heterogenous data. In Proceedings of RECOMB 2001.
-
(2001)
Proceedings of RECOMB 2001
-
-
Pavlidis, P.1
Weston, J.2
Cai, J.3
Grundy, W.4
-
25
-
-
0027133165
-
Functions of the gene products of E.coli
-
Riley,M. (1993) Functions of the gene products of E.coli. Microbiol. Rev., 57, 862-952.
-
(1993)
Microbiol. Rev.
, vol.57
, pp. 862-952
-
-
Riley, M.1
-
26
-
-
0038038642
-
Using a mixture of probabilistic decision trees for direct prediction of protein function
-
ACM, Berlin, Germany
-
Syed,U. and Yona,G. (2003) Using a mixture of probabilistic decision trees for direct prediction of protein function. In Proceedings of RECOMB 2003, ACM, Berlin, Germany.
-
(2003)
Proceedings of RECOMB 2003
-
-
Syed, U.1
Yona, G.2
-
27
-
-
0034649566
-
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
-
The Arabidopsis Genome Initiative
-
The Arabidopsis Genome Initiative. (2000) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature, 408, 796-815.
-
(2000)
Nature
, vol.408
, pp. 796-815
-
-
-
28
-
-
0035874906
-
From genome to function
-
Thornton,J.M. (2001) From genome to function. Science, 292, 2095-2097.
-
(2001)
Science
, vol.292
, pp. 2095-2097
-
-
Thornton, J.M.1
-
29
-
-
0034800374
-
InterProScan - An integration platform for the signature-recognition methods in InterPro
-
Zdobnov,E.M. and Apweiler,R. (2001) InterProScan - an integration platform for the signature-recognition methods in InterPro. Bioinformatics, 17, 847-884.
-
(2001)
Bioinformatics
, vol.17
, pp. 847-884
-
-
Zdobnov, E.M.1
Apweiler, R.2
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