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Volumn 52, Issue 4, 2006, Pages 671-679

Rapid proteome analysis of bronchoalveolar lavage samples of lifelong smokers and never-smokers by micro-scale liquid chromatography and mass spectrometry

Author keywords

[No Author keywords available]

Indexed keywords

ALPHA 1 ANTITRYPSIN; CALMODULIN; CATHEPSIN D; GLUTATHIONE TRANSFERASE; LIPOCORTIN 2; PEPTIDE; PROTEIN; PROTEIN KINASE; PROTEOME; PYRUVATE KINASE; SODIUM CHANNEL; SOMATOMEDIN BINDING PROTEIN;

EID: 33645455604     PISSN: 00099147     EISSN: None     Source Type: Journal    
DOI: 10.1373/clinchem.2005.060715     Document Type: Article
Times cited : (48)

References (30)
  • 1
    • 0034923505 scopus 로고    scopus 로고
    • Analysis of proteins and proteomes by mass spectrometry
    • Mann M, Hendrickson RC, Pandey A. Analysis of proteins and proteomes by mass spectrometry. Annu Rev Biochem 2001;70:437-73.
    • (2001) Annu Rev Biochem , vol.70 , pp. 437-473
    • Mann, M.1    Hendrickson, R.C.2    Pandey, A.3
  • 2
    • 0035241690 scopus 로고    scopus 로고
    • Mass spectrometry in proteomics
    • Aebersold R, Goodlett DR. Mass spectrometry in proteomics. Chem Rev 2001;101:269-95.
    • (2001) Chem Rev , vol.101 , pp. 269-295
    • Aebersold, R.1    Goodlett, D.R.2
  • 3
    • 8444252965 scopus 로고    scopus 로고
    • Genomic and proteomic technologies for individualization and improvement of cancer treatment
    • Wulfkuhle J, Espina V, Liotta L, Petricoin E. Genomic and proteomic technologies for individualization and improvement of cancer treatment. Eur J Cancer 2004;40:2623-32.
    • (2004) Eur J Cancer , vol.40 , pp. 2623-2632
    • Wulfkuhle, J.1    Espina, V.2    Liotta, L.3    Petricoin, E.4
  • 4
    • 5644255361 scopus 로고    scopus 로고
    • Proteomics and disease: The challenges for technology and discovery
    • Marko-Varga G, Fehniger TE. Proteomics and disease: the challenges for technology and discovery. J Proteome Res 2004;3:167-78.
    • (2004) J Proteome Res , vol.3 , pp. 167-178
    • Marko-Varga, G.1    Fehniger, T.E.2
  • 5
    • 7644240983 scopus 로고    scopus 로고
    • Preparative linear ion trap mass spectrometer for separation and collection of purified proteins and peptides in arrays using ion son landing
    • Blake TA, Ouyang Z, Wiseman JM, Takats Z, Guymon AJ, Kothari S, et al. Preparative linear ion trap mass spectrometer for separation and collection of purified proteins and peptides in arrays using ion son landing. Anal Chem 2004;76:6293-305.
    • (2004) Anal Chem , vol.76 , pp. 6293-6305
    • Blake, T.A.1    Ouyang, Z.2    Wiseman, J.M.3    Takats, Z.4    Guymon, A.J.5    Kothari, S.6
  • 6
    • 4544370533 scopus 로고    scopus 로고
    • Improved peptide identification in proteomics by two consecutive stages of mass spectrometric fragmentation
    • Olsen JV, Mann M. Improved peptide identification in proteomics by two consecutive stages of mass spectrometric fragmentation. Proc Natl Acad Sci USA 2004;101:13417-22.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 13417-13422
    • Olsen, J.V.1    Mann, M.2
  • 7
    • 0035106351 scopus 로고    scopus 로고
    • Large-scale analysis of the yeast proteome by multidimensional protein identification technology
    • Washburn MP, Wolters D, Yates JR III. Large-scale analysis of the yeast proteome by multidimensional protein identification technology. Nat Biotechnol 2001;19:242-7.
    • (2001) Nat Biotechnol , vol.19 , pp. 242-247
    • Washburn, M.P.1    Wolters, D.2    Yates III, J.R.3
  • 9
    • 0036709014 scopus 로고    scopus 로고
    • Bronchoalveolar lavage fluid protein composition in patients with sarcoidosis and idiopathic pulmonary fibrosis: A two-dimensional electrophoretic study
    • Magi B, Bini L, Perari MG, Fossi A, Sanchez JC, Hochstrasser D, et al. Bronchoalveolar lavage fluid protein composition in patients with sarcoidosis and idiopathic pulmonary fibrosis: a two-dimensional electrophoretic study. Electrophoresis 2002;23:3434-44.
    • (2002) Electrophoresis , vol.23 , pp. 3434-3444
    • Magi, B.1    Bini, L.2    Perari, M.G.3    Fossi, A.4    Sanchez, J.C.5    Hochstrasser, D.6
  • 10
    • 0346352142 scopus 로고    scopus 로고
    • Changes in bronchoalveolar lavage fluid proteins in sarcoidosis: A proteomics approach
    • Sabounchi-Schutt F, Astrom J, Hellman U, Eklund A, Grunewald J. Changes in bronchoalveolar lavage fluid proteins in sarcoidosis: a proteomics approach. Eur Respir J 2003;21:414-20.
    • (2003) Eur Respir J , vol.21 , pp. 414-420
    • Sabounchi-Schutt, F.1    Astrom, J.2    Hellman, U.3    Eklund, A.4    Grunewald, J.5
  • 11
    • 0033846377 scopus 로고    scopus 로고
    • Human bronchoalveolar lavage fluid protein two-dimensional database: Study of interstitial lung diseases
    • Wattiez R, Hermans C, Cruyt C, Bernard A, Falmagne P. Human bronchoalveolar lavage fluid protein two-dimensional database: study of interstitial lung diseases. Electrophoresis 2000;21:2703-12.
    • (2000) Electrophoresis , vol.21 , pp. 2703-2712
    • Wattiez, R.1    Hermans, C.2    Cruyt, C.3    Bernard, A.4    Falmagne, P.5
  • 12
    • 26844454132 scopus 로고    scopus 로고
    • Differential proteomic analysis of bronchoalveolar lavage fluid in asthmatics following segmental antigen challenge
    • Wu J, Kobayashi M, Sousa EA, Liu W, Cai J, Goldman SJ, et al. Differential proteomic analysis of bronchoalveolar lavage fluid in asthmatics following segmental antigen challenge. Mol Cell Proteomics 2005;4:1251-64.
    • (2005) Mol Cell Proteomics , vol.4 , pp. 1251-1264
    • Wu, J.1    Kobayashi, M.2    Sousa, E.A.3    Liu, W.4    Cai, J.5    Goldman, S.J.6
  • 13
    • 85069078530 scopus 로고    scopus 로고
    • Selection of protein expression signatures by interfacing pathophysiology and proteomics technology in smokers and never-smokers
    • Plymoth A, Lofdahl C-G, Ekberg-Jansson A, Dahlbäck M, Fehniger TE, Marko-Varga G. Selection of protein expression signatures by interfacing pathophysiology and proteomics technology in smokers and never-smokers. Eur Respir J 2005;26(Suppl 49):441s.
    • (2005) Eur Respir J , vol.26 , Issue.SUPPL. 49
    • Plymoth, A.1    Lofdahl, C.-G.2    Ekberg-Jansson, A.3    Dahlbäck, M.4    Fehniger, T.E.5    Marko-Varga, G.6
  • 15
    • 10744233766 scopus 로고    scopus 로고
    • Quantification of proteins and metabolites by mass spectrometry without isotopic labeling or spiked standards
    • Wang W, Zhou H, Lin H, Roy S, Shaler TA, Hill LR, et al. Quantification of proteins and metabolites by mass spectrometry without isotopic labeling or spiked standards. Anal Chem 2003;75:4818-26.
    • (2003) Anal Chem , vol.75 , pp. 4818-4826
    • Wang, W.1    Zhou, H.2    Lin, H.3    Roy, S.4    Shaler, T.A.5    Hill, L.R.6
  • 16
    • 10444251074 scopus 로고    scopus 로고
    • Use of mass spectrometry to identify protein biomarkers of disease severity in the synovial fluid and serum of patients with rheumatoid arthritis
    • Liao H, Wu J, Kuhn E, Chin W, Chang B, Jones MD, et al. Use of mass spectrometry to identify protein biomarkers of disease severity in the synovial fluid and serum of patients with rheumatoid arthritis. Arthritis Rheum 2004;50:3792-803.
    • (2004) Arthritis Rheum , vol.50 , pp. 3792-3803
    • Liao, H.1    Wu, J.2    Kuhn, E.3    Chin, W.4    Chang, B.5    Jones, M.D.6
  • 17
    • 0344305739 scopus 로고    scopus 로고
    • Global protein identification and quantification technology using two-dimensional liquid chromatography nanospray mass spectrometry
    • Chelius D, Zhang T, Wang G, Shen RF. Global protein identification and quantification technology using two-dimensional liquid chromatography nanospray mass spectrometry. Anal Chem 2003;75:6658-65.
    • (2003) Anal Chem , vol.75 , pp. 6658-6665
    • Chelius, D.1    Zhang, T.2    Wang, G.3    Shen, R.F.4
  • 18
    • 0037106398 scopus 로고    scopus 로고
    • Identification and relative quantitation of protein mixtures by enzymatic digestion followed by capillary reversed-phase liquid chromatography-tandem mass spectrometry
    • Bondarenko PV, Chelius D, Shaler TA. Identification and relative quantitation of protein mixtures by enzymatic digestion followed by capillary reversed-phase liquid chromatography-tandem mass spectrometry. Anal Chem 2002;74:4741-9.
    • (2002) Anal Chem , vol.74 , pp. 4741-4749
    • Bondarenko, P.V.1    Chelius, D.2    Shaler, T.A.3
  • 19
    • 0027385611 scopus 로고
    • Stressful life events, social support, and mortality in men born in 1933
    • Rosengren A, Orth-Gomer K, Wedel H, Wilhelmsen L. Stressful life events, social support, and mortality in men born in 1933. BMJ 1993;307:1102-5.
    • (1993) BMJ , vol.307 , pp. 1102-1105
    • Rosengren, A.1    Orth-Gomer, K.2    Wedel, H.3    Wilhelmsen, L.4
  • 20
    • 0034946499 scopus 로고    scopus 로고
    • Neutrophil-associated activation markers in healthy smokers relates to a fall in DL(CO) and to emphysematous changes on high resolution CT
    • Ekberg-Jansson A, Andersson B, Bake B, Boijsen M, Enanden I, Rosengren A, et al. Neutrophil-associated activation markers in healthy smokers relates to a fall in DL(CO) and to emphysematous changes on high resolution CT. Respir Med 2001;95:363-73.
    • (2001) Respir Med , vol.95 , pp. 363-373
    • Ekberg-Jansson, A.1    Andersson, B.2    Bake, B.3    Boijsen, M.4    Enanden, I.5    Rosengren, A.6
  • 21
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford MM. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 1976;72:248-54.
    • (1976) Anal Biochem , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 22
    • 23944469911 scopus 로고    scopus 로고
    • A study of glycoproteins in human serum and plasma reference standards (HUPO) using multilectin affinity chromatography coupled with RPLC-MS/MS
    • Yang Z, Hancock WS, Chew TR, Bonilla L. A study of glycoproteins in human serum and plasma reference standards (HUPO) using multilectin affinity chromatography coupled with RPLC-MS/MS. Proteomics 2005;5:3353-66.
    • (2005) Proteomics , vol.5 , pp. 3353-3366
    • Yang, Z.1    Hancock, W.S.2    Chew, T.R.3    Bonilla, L.4
  • 23
    • 0141924429 scopus 로고    scopus 로고
    • Reproducibility of quantitative proteomic analyses of complex biological mixtures by multidimensional protein identification technology
    • Washburn MP, Ulaszek RR, Yates JR 3rd. Reproducibility of quantitative proteomic analyses of complex biological mixtures by multidimensional protein identification technology. Anal Chem 2003;75:5054-61.
    • (2003) Anal Chem , vol.75 , pp. 5054-5061
    • Washburn, M.P.1    Ulaszek, R.R.2    Yates III, J.R.3
  • 24
    • 3042735127 scopus 로고    scopus 로고
    • The need for guidelines in publication of peptide and protein identification data: Working Group on Publication Guidelines for Peptide and Protein Identification Data
    • Carr S, Aebersold R, Baldwin M, Burlingame A, Clauser K, Nesvizhskii A; Working Group on Publication Guidelines for Peptide and Protein Identification Data. The need for guidelines in publication of peptide and protein identification data: Working Group on Publication Guidelines for Peptide and Protein Identification Data. Mol Cell Proteomics 2004;3:531-3.
    • (2004) Mol Cell Proteomics , vol.3 , pp. 531-533
    • Carr, S.1    Aebersold, R.2    Baldwin, M.3    Burlingame, A.4    Clauser, K.5    Nesvizhskii, A.6
  • 27
    • 84871130356 scopus 로고    scopus 로고
    • Gene Ontology Database. http://www.geneontology.org/ (accessed February 2005).
    • Gene Ontology Database
  • 28
    • 84870438764 scopus 로고    scopus 로고
    • uniprot_sprot.dat.gz. Download version available at ftp://ftp.ebi.ac.uk/ pub/databases/GO/goa/UNIPROT
    • Gene Ontology. uniprot_sprot.dat.gz. Download version available at ftp://ftp.ebi.ac.uk/pub/databases/GO/goa/UNIPROT/ (accessed February 2005).
    • Gene Ontology
  • 30
    • 0041733300 scopus 로고    scopus 로고
    • Evaluation of shotgun sequencing for proteomic analysis of human plasma using HPLC coupled with either ion trap or Fourier transform mass spectrometry
    • Wu SL, Choudhary G, Ramstrom M, Bergquist J, Hancock WS. Evaluation of shotgun sequencing for proteomic analysis of human plasma using HPLC coupled with either ion trap or Fourier transform mass spectrometry. J Proteome Res 2003;2:383-93.
    • (2003) J Proteome Res , vol.2 , pp. 383-393
    • Wu, S.L.1    Choudhary, G.2    Ramstrom, M.3    Bergquist, J.4    Hancock, W.S.5


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