Gene action of new mutations in Arabidopsis thaliana

Genetics

Volumn 172, Issue 3, 2006, Pages 1855-1865

  Shaw, Ruth G ^a   Chang, Shu Mei ^b  

^a UNIVERSITY OF MINNESOTA   (United States)

^b UNIVERSITY OF GEORGIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALLELE; ARABIDOPSIS; ARTICLE; CONTROLLED STUDY; DOMINANT INHERITANCE; FLOWER; GENE ACTIVITY; GENE EXPRESSION; GENETIC CROSS; GENOTYPE; GREENHOUSE; MUTATION RATE; NONHUMAN; PHENOLOGY; PLANT HEIGHT; PLANT LEAF; PRIORITY JOURNAL; PROGENY; RECESSIVE INHERITANCE; REPRODUCTION; SPONTANEOUS MUTATION;

ALLELES; ARABIDOPSIS; DNA MUTATIONAL ANALYSIS; DNA, PLANT; FLOWERS; FOUNDER EFFECT; GENES, DOMINANT; GENES, PLANT; LINKAGE (GENETICS); MUTATION; PHYSICAL CHROMOSOME MAPPING; PLANT LEAVES; POLYMORPHISM, GENETIC;

ARABIDOPSIS; ARABIDOPSIS THALIANA;

EID: 33645242699     PISSN: 00166731     EISSN: 00166731     Source Type: Journal    
DOI: 10.1534/genetics.105.050971     Document Type: Article

References (38)

1. ABBOTT, R. J., and M. F. GOMES, 1989 Population genetic structure and outcrossing rate of Arabidopsis thaliana. Heredity 62: 411-418.
2. CABALLERO, A. M., and W. G. HILL, 1992 Effects of partial inbreeding on fixation rates and variation of mutant genes. Genetics 131:493-507.
3. CABALLERO, A. M., and P. D. KEIGHTLEY, 1994 A pleiotropic nonadditive model of variation in quantitative traits. Genetics 138: 883-900.
4. CABALLERO, A., P. D. KEIGHTLEY and M. TURELLI, 1997 Average dominance for polygenes: drawbacks of regression estimates. Genetics 147: 1487-1490.
5. CHARLESWORTH, B, 1992 Evolutionary rates in partially self-fertilizing species. Am. Nat. 140: 126-148.
6. CHARLESWORTH, D., M. T. MORGAN and B. CHARLESWORTH, 1990 Inbreeding depression, genetic load, and the evolution of outcrossing rates in a multilocus system with no linkage. Evolution 44: 1469-1489.
7. CHAVARRIAS, D., C. LOPEZ-FANJUL and A. GARCIA-DORADO, 2001 The rate of mutation and the homozygous and heterozygous mutational effects for competitive viability: a long-termexperiment with Drosophila melanogaster. Genetics 158: 681-693.
8. DRAKE, J. W., B. CHARLESWORTH, D. CHARLESWORTH and J. F. CROW, 1998 Rates of spontaneous mutation. Genetics 148: 1667-1686.
9. FALCONER, D. S., and T. F. C. MACKAY, 1996 Introduction to Quantitative Genetics. Ed. 4. Prentice Hall, Harlow, UK.
10. FRY, J. D., and S. V. NUZHDIN, 2003 Dominance of mutations affecting viability in Drosophila melanogaster. Genetics 163: 1357-1364.
11. FRY, J. D., 2004 How common are overdominant mutations? Genetics 167: 1031-1032.
12. GARCIA-DORADO, A., and A. CABALLERO, 2000 On the average coefficient of dominance of deleterious spontaneous mutations. Genetics 155: 1991-2001.
13. HALDANE, J. B. S., 1927 A mathematical theory of natural and artificial selection. V. Selection and mutation. Proc. Cambridge Phil. Soc. 23: 838-844.
14. JOSEPH, S. B., and D. W. HALL, 2004 Spontaneous mutations in diploid Saccharomyces cerevisiae: more beneficial than expected. Genetics 168: 1817-1825.
15. KAWECKI, T. J., N. H. BARTON and J. D. FRY, 1997 Mutational collapse of fitness in marginal habitats and the evolution of ecological specialization. J. Evol. Biol. 10: 407-429.
16. KEIGHTLEY, P. D., and A. CABALLERO, 1997 Genomic mutation rates for lifetime reproductive output and lifespan in Caenorhabditis elegans. Proc. Natl. Acad. Sci. USA 94: 3823-3827.
17. KONDRASHOV, A. S., 1988 Deleterious mutation and the evolution of sexual reproduction. Nature 336: 435-440.
18. LANDE, R., 1976 The maintenance of genetic variability by mutation in a polygenic character with linked loci. Genet. Res. 26: 221-235.
19. LANDE, R., 1994 Risk of population extinction from fixation of new deleterious mutations. Evolution 48: 1460-1469.
20. LOPEZ, M. A., and C. LOPEZ-FANJUL, 1993 Spontaneous mutation for a quantitative trait in Drosophila melanogaster. II. Distribution of mutant effects on the trait and fitness. Genet. Res. 61: 117-126.
21. LYNCH, M., J. BLANCHARD, D. HOULE, T. KIBOTA, S. SCHULTZ et al., 1999 Perspective: spontaneous deleterious mutation. Evolution 53: 1-19.
22. LYNCH, M., J. CONERY and R. BÜRGER, 1995 Mutation accumulation and the extinction of small populations. Am. Nat. 146: 489-518.
23. LYNCH, M., and W. G. HILL, 1986 Phenotypic evolution by neutral mutation. Evolution 40: 915-935.
24. MACKAY, T. F. C., R. F. LYMAN, M. S. JACKSON, C. TERZIAN and W. G. HILL, 1992 Polygenic mutation in Drosophila melanogaster: estimates from divergence among inbred strains. Evolution 46: 300-316.
25. MUKAI, T., S. I. CHIGUSA, L. E. METTLER and J. F. CROW, 1972 Mutation rate and dominance of genes affecting viability in Drosophila melanogaster. Genetics 72: 333-355.
26. OHNISHI, O., 1977 Spontaneous and ethyl methane-sulfonate induced mutations controlling viability in Drosophila melanogaster. III. Heterozygous effect of polygenic mutations. Genetics 87: 547-556.
27. PETERS, A. D., D. L. HALLIGAN, M. C. WHITLOCK and P. D. KEIGHTLEY, 2003 Dominance and overdominance of mildly deleterious induced mutations for fitness traits in Caenorhabditis elegans. Genetics 165: 589-599.
28. PIGLIUCCI, M., H. POLLARD and M. B. CRUZAN, 2003 Comparative studies of evolutionary responses to light environments in Arabidopsis. Am. Nat. 161: 68-82.
29. SHAW, F. H., C. J. GEYER and R. G. SHAW, 2002 A comprehensive model of mutations affecting fitness and inferences for Arabidopsis thaliana. Evolution 56: 453-463.
30. SHAW, R. G., D. L. BYERS and E. DARMO, 2000 Spontaneous mutational effects on reproductive traits of Arabidopsis thaliana. Genetics 155: 369-378.
31. SHAW, R. G., and F. H. SHAW, 1994 Quercus: programs for quantitative genetic analysis using maximum likelihood (http://www.cbs.umn.edu/eeb/events/ quercus.shtml).
32. SHAW, R. G., F. H. SHAW and C. J. GEYER, 2003 What fraction of mutations reduces fitness?: a reply to Keightley and Lynch. Evolution 57: 686-689.
33. SZAFRANIEC, K., D. M. WLOCH, P. SLIWA, R. H. BORTS and R. KORONA, 2003 Small fitness effects and weak genetic interactions between deleterious mutations in heterozygous loci of the yeast Saccharomyces cerevisiae. Genet. Res. 82: 19-31.
34. TURELLI, M., 1984 Heritable genetic variation via mutation-selection balance: Lerch's zeta meets the abdominal bristle. Theor. Popul. Biol. 25: 138-193.
35. WHITTLE, C., and M. O. JOHNSTON, 2003 Male-biased transmission of deleterious mutations to the progeny in Arabidopsis thaliana. Proc. Natl. Acad. Sci. 100: 4055-4059.
36. ZHANG, X.-S., J. WANG and W. G. HILL, 2002 Pleiotropic model of maintenance of quantitative genetic variance at mutation-selection balance. Genetics 161: 419-433.
37. ZHANG, X.-S., J. WANG and W. G. HILL, 2004a Influence of dominance, leptokurtosis and pleiotropy of deleterious mutations on quantitative genetic variation at mutation-selection balance. Genetics 166: 597-610.
38. ZHANG, X.-S., J. WANG and W. G. HILL, 2004b Redistribution of gene frequency and changes of genetic variation following a bottleneck in population size. Genetics 167: 1475-1492.