Selective zirconium dioxide-based enrichment of phosphorylated peptides for mass spectrometric analysis

Analytical Chemistry

Volumn 78, Issue 6, 2006, Pages 1743-1749

  Kweon, Hye Kyong ^a   Håkansson, Kristina ^a  

^a UNIVERSITY OF MICHIGAN   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ENRICHMENT; PHOSPHOPEPTIDE ENRICHMENT; PHOSPHORYLATED PEPTIDES; PROTEOLYTIC MIXTURES; REPRODUCIBILITY; TRYPSIN;

CATALYST SELECTIVITY; CHROMATOGRAPHY; MASS SPECTROMETRY; PROTEINS; STOICHIOMETRY; TITANIUM DIOXIDE;

ZIRCONIUM COMPOUNDS;

ALPHA CASEIN; BETA CASEIN; CASEIN; PHOSPHOPEPTIDE; TITANIUM DIOXIDE; TRYPSIN; UNCLASSIFIED DRUG; ZIRCONIUM OXIDE;

AMINO ACID SEQUENCE; ARTICLE; CHROMATOGRAPHY; ELECTROSPRAY MASS SPECTROMETRY; EXTRACTION; ION CYCLOTRON RESONANCE MASS SPECTROMETRY; MASS SPECTROMETER; MASS SPECTROMETRY; PERFORMANCE; PROTEIN DEGRADATION; PROTEIN PHOSPHORYLATION; STOICHIOMETRY;

MASS SPECTROMETRY; PHOSPHOPEPTIDES; PHOSPHOPROTEINS; SENSITIVITY AND SPECIFICITY; TITANIUM; ZIRCONIUM;

EID: 33645217942     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac0522355     Document Type: Article

References (37)

1. Graves, J. D.; Krebs, E. G. Pharmacol. Ther. 1999, 82, 111-121.
2. Hunter, T. Cell 2000, 100, 113-127.
3. McLachlin, D. T.; Chait, B. T. Curr. Opin. Chem. Biol. 2001, 5, 591-602.
4. Mann, M.; Ong, S.-E.; Gronborg, M.; Steen, H.; Jensen, O. N.; Pandey, A. Trends Biotechnol. 2002, 20, 261-268.
5. Schweppe, R. E.; Haydon, C. E.; Lewis, T. A.; Resing, K. A.; Ahn, N. G. Acc. Chem. Res. 2003, 36, 453-461.
6. Chalmers, M. J.; Kolch, W.; Emmett, M. R.; Marshall, A. G. J. Chromatogr., B 2004, 803, 111-120.
7. Cantin, G. T.; Yates, J. R. J. Chromatogr., A 2004, 1053, 7-14.
8. Meng, F.; Forbes, A. J.; Miller, L. M.; Kelleher, N. L. Mass Spectrom. Rev. 2005, 24, 57-77.
9. Neville, D. C.; Rozanas, C. R.; Price, E. M.; Gruis, D. B.; Verkman, A. S.; Townsend, R. R. Protein Sci. 1997, 6, 2436-2445.
10. Posewitz, M. C.; Tempst, P. Anal. Chem. 1999, 71, 2883-2892.
11. Nuhse, T. S.; Stensballe, A.; Jensen, O. N.; Peck, S. C. Mol. Cell. Proteomics 2003, 2, 1234-1243.
12. Pandey, A.; Podtelejnikov, A. V.; Blagoev, B.; Bustelo, X. R.; Mann, M.; Lodish, H. F. Proc. Natl. Acad. Sci. U.S.A. 2000, 97, 179-184.
13. Ficarro, S. B.; Chertihin, O.; Westbrook, V. A.; White, F.; Jayes, F.; Kalab, P.; Marto, J. A.; Shabanowitz, J.; Herr, J. C.; Hunt, D. F.; Visconti, P. E. J. Biol. Chem. 2003, 278, 11579-11589.
14. McLachlin, D. T.; Chait, B. T. Anal. Chem. 2003, 75, 6826-6836.
15. Stensballe, A.; Andersen, S.; Jensen, O. N. Proteomics 2001, 1, 207-222.
16. Haydon, C. E.; Eyers, P. A.; Aveline-Wolf, L. D.; Resing, K. A.; Maller, J. L.; Ahn, N. G. Mol. Cell. Proteomics 2003, 2, 1055-1067.
17. Garcia, B. A.; Shabanowitz, J.; Hunt, D. F. Methods 2005, 35, 256-264.
18. Sano, A.; Nakamura, H. Anal. Sci. 2004, 20, 861-864.
19. Pinkse, M. W.; Uitto, P. M.; Hilhorst, M. J.; Ooms, B.; Heck, A. J. R. Anal. Chem. 2004, 76, 3935-3943.
20. Larsen, M. R.; Thingholm, T. E.; Jensen, O. N.; Roepstorff, P.; Jorgensen, T. J. D. Mol. Cell. Proteomics 2005, 4, 873-886.
21. Chen, C. T.; Chen, Y. C. Anal. Chem. 2005, 77, 5912-5919.
22. Wolschin, F.; Wienkoop, S.; Weckwerth, W. Proteomics 2005, 5, 4389-4397.
23. Nawrocki, J.; Rigney, J.; McCormick, A.; Carr, P. W. J. Chromatogr., A 1993, 657, 229-282.
24. Nawrocki, J.; Dunlap, C.; McCormick, A.; Carr, P. W. J. Chromatogr., A 2004, 1028, 1-30.
25. Hoth, D. C.; Rivera, J. G.; Colon, L. A. J. Chromatogr., A 2005, 1079, 392-396.
26. Senko, M. W.; Canterbury, J. D.; Guan, S.; Marshall, A. G. Rapid Commun. Mass Spectrom. 1996, 10, 1839-1844.
27. Amplett, C. B. Inorganic Ion Exchangers; Elsevier: Amsterdam. The Netherlands, 1964.
28. Kraus, K. A.; Philips, H. O.; Carlson, T. A.; Johnson, J. S. Proceedings of the Second International Conference on Peaceful Uses of Atomic Energy, Geneva, Switzerland, 1958; 3.
29. Blackwell, J. A.; Carr, P. W. J. Chromatogr., A 1991, 549, 43-57.
30. Blackwell, J. A.; Carr, P. W. J. Chromatogr., A 1991, 549, 59-75.
31. Grun, M.; Kurganov, A. A.; Schacht, S.; Schuth, F.; Unger, K. K. J. Chromatogr., A 1996, 740, 1-9.
32. Seeley, E. H.; Riggs, L. D.; Regnier, F. E. J. Chromatogr., A 2005, 817, 81-88.
33. Ewing, N. P.; Cassady, C. J. J. Am. Soc. Mass Spectrom. 2001, 12, 105-116.
34. Bowie, J. H.; Brinkworth, C. S.; Dua, S. Mass Spectrom. Rev. 2002, 21, 87-107.
35. Stensballe, A.; Norregaard-Jensen, O.; Olsen, J. V.; Haselmann, K. F.; Zubarev, R. A. Rapid Commun. Mass Spectrom. 2000, 14, 1793-1800.
36. Shi, S. D.-H.; Hemling, M. E.; Carr, S. A.; Horn, D. M.; Lindh, I.; McLafferty, F. W. Anal. Chem. 2001, 73, 19-22.
37. Chalmers, M. J.; Hakansson, K.; Johnson, R.; Smith, R.; Shen, J.; Emmett, M. R.; Marshall, A. G. Proteomics 2004, 4, 970-981.