-
2
-
-
18344396568
-
Minimum information about a microarray experiment (MIAME) - Toward standards for microarray data
-
Brazma A. Hingamp P. Quackenbush J. Sherlock G. Spellman P. Stoeckert C. Aach J. Ansorge W. Ball C.A. Causton H.C. Gaasterland T. Glenisson P. Holstege F.C.P. Kim I.F. Markowitz V. Matese J.C. Parkinson H. Robinson A. Sarkans U. Schulze-Kremer S. Stewart J. Taylor R. Vilo J. Vingron M. 2001 Minimum information about a microarray experiment (MIAME) - toward standards for microarray data NatGenet 29 365 371
-
(2001)
NatGenet
, vol.29
, pp. 365-371
-
-
Brazma, A.1
Hingamp, P.2
Quackenbush, J.3
Sherlock, G.4
Spellman, P.5
Stoeckert, C.6
Aach, J.7
Ansorge, W.8
Ball, C.A.9
Causton, H.C.10
Gaasterland, T.11
Glenisson, P.12
Holstege, F.C.P.13
Kim, I.F.14
Markowitz, V.15
Matese, J.C.16
Parkinson, H.17
Robinson, A.18
Sarkans, U.19
Schulze-Kremer, S.20
Stewart, J.21
Taylor, R.22
Vilo, J.23
Vingron, M.24
more..
-
3
-
-
24944502751
-
Comparative analysis of 87 000 expressed sequence tags from the fumonisin-producing fungus Fusarium verticillioides
-
Brown D.W. Cheung F. Proctor R.H. Butchko R.A. Zheng L. Lee Y. Utterback T. Smith S. Feldblyum T. Glenn A.E. Plattner R.D. Kendra D.F. Town C.D. Whitelaw C.A. 2005 Comparative analysis of 87 000 expressed sequence tags from the fumonisin-producing fungus Fusarium verticillioides Fungal GenetBiol 42 848 861
-
(2005)
Fungal GenetBiol
, vol.42
, pp. 848-861
-
-
Brown, D.W.1
Cheung, F.2
Proctor, R.H.3
Butchko, R.A.4
Zheng, L.5
Lee, Y.6
Utterback, T.7
Smith, S.8
Feldblyum, T.9
Glenn, A.E.10
Plattner, R.D.11
Kendra, D.F.12
Town, C.D.13
Whitelaw, C.A.14
-
4
-
-
0000210231
-
A rapid inoculation technique to evaluate the resistance of cotton to Verticillium albo-atrum
-
Bugbee W.M. Presley J.T. 1967 A rapid inoculation technique to evaluate the resistance of cotton to Verticillium albo-atrum Phytopathology 57 1264 0000
-
(1967)
Phytopathology
, vol.57
, pp. 1264-0000
-
-
Bugbee, W.M.1
Presley, J.T.2
-
6
-
-
20644470728
-
Functional analysis of pathogenicity proteins of the potato cyst nematode Globodera rostochiensis using RNAi
-
Chen Q. Rehman S. Smant G. Jones J.T. 2005 Functional analysis of pathogenicity proteins of the potato cyst nematode Globodera rostochiensis using RNAi MolPlant-Microbe Interact 18 621 625
-
(2005)
MolPlant-Microbe Interact
, vol.18
, pp. 621-625
-
-
Chen, Q.1
Rehman, S.2
Smant, G.3
Jones, J.T.4
-
7
-
-
0035573819
-
Potential role of transposable elements in the rapid reorganization of the Fusarium oxysporum genome
-
Daviere J.M. Langin T. Daboussi M.J. 2001 Potential role of transposable elements in the rapid reorganization of the Fusarium oxysporum genome Fungal GenetBiol 34 177 192
-
(2001)
Fungal GenetBiol
, vol.34
, pp. 177-192
-
-
Daviere, J.M.1
Langin, T.2
Daboussi, M.J.3
-
9
-
-
0035106081
-
A MAP kinase of the vascular wilt fungus Fusarium oxysporum is essential for root penetration and pathogenesis
-
Di Pietro A. Garcia-Maceira F.I. Meglecz E. Roncero M.I.G. 2001 A MAP kinase of the vascular wilt fungus Fusarium oxysporum is essential for root penetration and pathogenesis MolMicrobiol 39 1140 1152
-
(2001)
MolMicrobiol
, vol.39
, pp. 1140-1152
-
-
Di Pietro, A.1
Garcia-Maceira, F.I.2
Meglecz, E.3
Roncero, M.I.G.4
-
10
-
-
27644512876
-
Nitrogen-responsive genes are differentially regulated in planta during Fusarium oxysporum f. sp lycopersici infection
-
Divon H.H. Rothan-Denoyes B. Davydov O. Di Pietro A. Fluhr R. 2005 Nitrogen-responsive genes are differentially regulated in planta during Fusarium oxysporum f. sp lycopersici infection MolPlant Pathol 6 459 470
-
(2005)
MolPlant Pathol
, vol.6
, pp. 459-470
-
-
Divon, H.H.1
Rothan-Denoyes, B.2
Davydov, O.3
Di Pietro, A.4
Fluhr, R.5
-
11
-
-
2442609706
-
Gene expression profile changes in cotton root and hypocotyl tissues in response to infection with Fusarium oxysporum f. sp. vasinfectum
-
Dowd C. Wilson L.W. McFadden H. 2004 Gene expression profile changes in cotton root and hypocotyl tissues in response to infection with Fusarium oxysporum f. sp. vasinfectum MolPlant-Microbe Interact 17 654 667
-
(2004)
MolPlant-Microbe Interact
, vol.17
, pp. 654-667
-
-
Dowd, C.1
Wilson, L.W.2
McFadden, H.3
-
12
-
-
0036376993
-
Statistical methods for identifying differentially expressed genes in replicated cDNA microarray experiments
-
Dudoit S. Yang Y.H. Callow M.J. Speed T.P. 2002 Statistical methods for identifying differentially expressed genes in replicated cDNA microarray experiments StatSinica 12 111 139
-
(2002)
StatSinica
, vol.12
, pp. 111-139
-
-
Dudoit, S.1
Yang, Y.H.2
Callow, M.J.3
Speed, T.P.4
-
14
-
-
0026027655
-
Cpc-1, the general regulatory gene for genes of amino-acid biosynthesis in Neurospora-crassa, is differentially expressed during the asexual life-cycle
-
Ebbole D.J. Paluh J.L. Plamann M. Sachs M.S. Yanofsky C. 1991 Cpc-1, the general regulatory gene for genes of amino-acid biosynthesis in Neurospora-crassa, is differentially expressed during the asexual life-cycle MolCell Biol 11 928 934
-
(1991)
MolCell Biol
, vol.11
, pp. 928-934
-
-
Ebbole, D.J.1
Paluh, J.L.2
Plamann, M.3
Sachs, M.S.4
Yanofsky, C.5
-
15
-
-
0029135967
-
The rate of vascular colonization as a measure of the genotypic interaction between various cultivars of tomato and various formae or races of Fusarium oxysporum
-
Gao H. Beckman C.H. Mueller W.C. 1995a The rate of vascular colonization as a measure of the genotypic interaction between various cultivars of tomato and various formae or races of Fusarium oxysporum PhysiolMolPlant Pathol 46 29 43
-
(1995)
PhysiolMolPlant Pathol
, vol.46
, pp. 29-43
-
-
Gao, H.1
Beckman, C.H.2
Mueller, W.C.3
-
16
-
-
0028870989
-
The Nature of tolerance to Fusarium oxysporum f. sp. lycopersici in polygenically field-resistant marglobe tomato plants
-
Gao H.R. Beckman C.H. Mueller W.C. 1995b The Nature of tolerance to Fusarium oxysporum f. sp. lycopersici in polygenically field-resistant marglobe tomato plants PhysiolMolPlant Pathol 46 401 412
-
(1995)
PhysiolMolPlant Pathol
, vol.46
, pp. 401-412
-
-
Gao, H.R.1
Beckman, C.H.2
Mueller, W.C.3
-
18
-
-
0030614141
-
The evolutionary biology of Fusarium oxysporum
-
Gordon T.R. Martyn R.D. 1997 The evolutionary biology of Fusarium oxysporum AnnuRevPhytopathol 35 111 128
-
(1997)
AnnuRevPhytopathol
, vol.35
, pp. 111-128
-
-
Gordon, T.R.1
Martyn, R.D.2
-
19
-
-
9944260431
-
Heading for disaster: Fusarium graminearum on cereal crops
-
Goswami R.S. Kistler H.C. 2004 Heading for disaster: Fusarium graminearum on cereal crops MolPlant Pathol 5 515 525
-
(2004)
MolPlant Pathol
, vol.5
, pp. 515-525
-
-
Goswami, R.S.1
Kistler, H.C.2
-
20
-
-
0036670231
-
Plant colonization by the vascular wilt fungus Fusarium oxysporum requires FOW1, a gene encoding a mitochondrial protein
-
Inoue I. Namiki F. Tsuge T. 2002 Plant colonization by the vascular wilt fungus Fusarium oxysporum requires FOW1, a gene encoding a mitochondrial protein Plant Cell 14 1869 1883
-
(2002)
Plant Cell
, vol.14
, pp. 1869-1883
-
-
Inoue, I.1
Namiki, F.2
Tsuge, T.3
-
21
-
-
0034045514
-
The endo-beta-1,4-glucanase CelA of Clavibacter michiganensis subsp michiganensis is a pathogenicity determinant required for induction of bacterial wilt of tomato
-
Jahr H. Dreier J. Meletzus D. Bahro R. Eichenlaub R. 2000 The endo-beta-1,4-glucanase CelA of Clavibacter michiganensis subsp michiganensis is a pathogenicity determinant required for induction of bacterial wilt of tomato MolPlant-Microbe Interact 13 703 714
-
(2000)
MolPlant-Microbe Interact
, vol.13
, pp. 703-714
-
-
Jahr, H.1
Dreier, J.2
Meletzus, D.3
Bahro, R.4
Eichenlaub, R.5
-
22
-
-
0038000634
-
The G protein beta subunit FGB1 regulates development and pathogenicity in Fusarium oxysporum
-
Jain S. Akiyama K. Kan T. Ohguchi T. Takata R. 2003 The G protein beta subunit FGB1 regulates development and pathogenicity in Fusarium oxysporum CurrGenet 43 79 86
-
(2003)
CurrGenet
, vol.43
, pp. 79-86
-
-
Jain, S.1
Akiyama, K.2
Kan, T.3
Ohguchi, T.4
Takata, R.5
-
23
-
-
0036944736
-
Targeted disruption of a G protein alpha subunit gene results in reduced pathogenicity in Fusarium oxysporum
-
Jain S. Akiyama K. Mae K. Ohguchi T. Takata R. 2002 Targeted disruption of a G protein alpha subunit gene results in reduced pathogenicity in Fusarium oxysporum CurrGenet 41 407 413
-
(2002)
CurrGenet
, vol.41
, pp. 407-413
-
-
Jain, S.1
Akiyama, K.2
Mae, K.3
Ohguchi, T.4
Takata, R.5
-
24
-
-
12844264247
-
Signaling via the G protein alpha subunit FGA2 is necessary for pathogenesis in Fusarium oxysporum
-
Jain S. Akiyama K. Takata R. Ohguchi T. 2005 Signaling via the G protein alpha subunit FGA2 is necessary for pathogenesis in Fusarium oxysporum FEMS MicrobiolLett 243 165 172
-
(2005)
FEMS MicrobiolLett
, vol.243
, pp. 165-172
-
-
Jain, S.1
Akiyama, K.2
Takata, R.3
Ohguchi, T.4
-
25
-
-
3843074134
-
The Fusarium wilt resistance locus Fom-2 of melon contains a single resistance gene with complex features
-
Joobeur T. King J.J. Nolin S.J. Thomas C.E. Dean R.A. 2004 The Fusarium wilt resistance locus Fom-2 of melon contains a single resistance gene with complex features Plant J 39 283 297
-
(2004)
Plant J
, vol.39
, pp. 283-297
-
-
Joobeur, T.1
King, J.J.2
Nolin, S.J.3
Thomas, C.E.4
Dean, R.A.5
-
26
-
-
0037654703
-
Expressed sequences from the basidiomycetous tree pathogen Heterobasidion annosum during early infection of scots pine
-
Karlsson M. Olson A. Stenlid J. 2003 Expressed sequences from the basidiomycetous tree pathogen Heterobasidion annosum during early infection of scots pine Fungal GenetBiol 39 51 59
-
(2003)
Fungal GenetBiol
, vol.39
, pp. 51-59
-
-
Karlsson, M.1
Olson, A.2
Stenlid, J.3
-
27
-
-
18844411362
-
A dual selection based, targeted gene replacement tool for Magnaporthe grisea and Fusarium oxysporum
-
Khang C.H. Park S.Y. Lee Y.H. Kang S.C. 2005 A dual selection based, targeted gene replacement tool for Magnaporthe grisea and Fusarium oxysporum Fungal GenetBiol 42 483 492
-
(2005)
Fungal GenetBiol
, vol.42
, pp. 483-492
-
-
Khang, C.H.1
Park, S.Y.2
Lee, Y.H.3
Kang, S.C.4
-
28
-
-
0036801541
-
Expression profile analysis of the low-oxygen response in Arabidopsis root cultures
-
Klok E.J. Wilson I.W. Wilson D. Chapman S.C. Ewing R.M. Somerville S.C. Peacock W.J. Dolferus R. Dennis E.S. 2002 Expression profile analysis of the low-oxygen response in Arabidopsis root cultures Plant Cell 14 2481 2494
-
(2002)
Plant Cell
, vol.14
, pp. 2481-2494
-
-
Klok, E.J.1
Wilson, I.W.2
Wilson, D.3
Chapman, S.C.4
Ewing, R.M.5
Somerville, S.C.6
Peacock, W.J.7
Dolferus, R.8
Dennis, E.S.9
-
29
-
-
0035991175
-
Functional and comparative bioinformatic analysis of expressed genes from wheat spikes infected with Fusarium graminearum
-
Kruger W.M. Pritsch C. Chao S.M. Muehlbauer G.J. 2002 Functional and comparative bioinformatic analysis of expressed genes from wheat spikes infected with Fusarium graminearum MolPlant-Microbe Interact 15 445 455
-
(2002)
MolPlant-Microbe Interact
, vol.15
, pp. 445-455
-
-
Kruger, W.M.1
Pritsch, C.2
Chao, S.M.3
Muehlbauer, G.J.4
-
30
-
-
0037221868
-
Class V chitin synthase determines pathogenesis in the vascular wilt fungus Fusarium oxysporum and mediates resistance to plant defence compounds
-
Madrid M.P. Di Pietro A. Roncero M.I.G. 2003 Class V chitin synthase determines pathogenesis in the vascular wilt fungus Fusarium oxysporum and mediates resistance to plant defence compounds MolMicrobiol 47 257 266
-
(2003)
MolMicrobiol
, vol.47
, pp. 257-266
-
-
Madrid, M.P.1
Di Pietro, A.2
Roncero, M.I.G.3
-
31
-
-
0026552444
-
An efficient method for isolation of RNA and DNA from plants containing polyphenolics
-
Maliyakal K. 1992 An efficient method for isolation of RNA and DNA from plants containing polyphenolics NuclAcids Res 20 2381
-
(1992)
NuclAcids Res
, vol.20
, pp. 2381
-
-
Maliyakal, K.1
-
32
-
-
0033957659
-
A region of the Agrobacterium tumefaciens chromosome containing genes required for virulence and attachment to host cells
-
Matthysse A.G. Yarnall H. Boles S.B. McMahan S. 2000 A region of the Agrobacterium tumefaciens chromosome containing genes required for virulence and attachment to host cells Bba-Gene StructExpr 1490 208 212
-
(2000)
Bba-Gene StructExpr
, vol.1490
, pp. 208-212
-
-
Matthysse, A.G.1
Yarnall, H.2
Boles, S.B.3
McMahan, S.4
-
33
-
-
0029813129
-
Requirement for genes with homology to ABC transport systems for attachment and virulence of Agrobacterium tumefaciens
-
Matthysse A.G. Yarnall H.A. Young N. 1996 Requirement for genes with homology to ABC transport systems for attachment and virulence of Agrobacterium tumefaciens JBacteriol 178 5302 5308
-
(1996)
JBacteriol
, vol.178
, pp. 5302-5308
-
-
Matthysse, A.G.1
Yarnall, H.A.2
Young, N.3
-
34
-
-
0033797402
-
Foxy: An active family of short interspersed nuclear elements from Fusarium oxysporum
-
Mes J.J. Haring M.A. Cornelissen B.J.C. 2000 Foxy: an active family of short interspersed nuclear elements from Fusarium oxysporum MolGenGenet 263 271 280
-
(2000)
MolGenGenet
, vol.263
, pp. 271-280
-
-
Mes, J.J.1
Haring, M.A.2
Cornelissen, B.J.C.3
-
35
-
-
0034685921
-
Glycosylphosphatidylinositol-anchored glucanosyltransferases play an active role in the biosynthesis of the fungal cell wall
-
Mouyna I. Fontaine T. Vai M. Monod M. Fonzi W.A. Diaquin M. Popolo L. Hartland R.P. Latge J.P. 2000 Glycosylphosphatidylinositol-anchored glucanosyltransferases play an active role in the biosynthesis of the fungal cell wall JBiolChem 275 14882 14889
-
(2000)
JBiolChem
, vol.275
, pp. 14882-14889
-
-
Mouyna, I.1
Fontaine, T.2
Vai, M.3
Monod, M.4
Fonzi, W.A.5
Diaquin, M.6
Popolo, L.7
Hartland, R.P.8
Latge, J.P.9
-
36
-
-
0035136139
-
Agrobacterium-mediated transformation of Fusarium oxysporum: An efficient tool for insertional mutagenesis and gene transfer
-
Mullins E.D. Chen X. Romaine P. Raina R. Geiser D.M. Kang S. 2001 Agrobacterium-mediated transformation of Fusarium oxysporum: an efficient tool for insertional mutagenesis and gene transfer Phytopathology 91 173 180
-
(2001)
Phytopathology
, vol.91
, pp. 173-180
-
-
Mullins, E.D.1
Chen, X.2
Romaine, P.3
Raina, R.4
Geiser, D.M.5
Kang, S.6
-
37
-
-
84982358134
-
A revised medium for rapid growth and bioassays with tobacco tissue culture
-
Murashige T. Skoog F. 1962 A revised medium for rapid growth and bioassays with tobacco tissue culture PhysiolPlant 15 473 497
-
(1962)
PhysiolPlant
, vol.15
, pp. 473-497
-
-
Murashige, T.1
Skoog, F.2
-
40
-
-
0142061165
-
Loss of function of the Fusarium oxysporum SNF1 gene reduces virulence on cabbage and Arabidopsis
-
Ospina-Giraldo M.D. Mullins E. Kang S. 2003 Loss of function of the Fusarium oxysporum SNF1 gene reduces virulence on cabbage and Arabidopsis CurrGenet 44 49 57
-
(2003)
CurrGenet
, vol.44
, pp. 49-57
-
-
Ospina-Giraldo, M.D.1
Mullins, E.2
Kang, S.3
-
41
-
-
3142621221
-
RNA interference in Histoplasma capsulatum demonstrates a role for alpha-(1,3)-glucan in virulence
-
Rappleye C.A. Engle J.T. Goldman W.E. 2004 RNA interference in Histoplasma capsulatum demonstrates a role for alpha-(1,3)-glucan in virulence MolMicrobiol 53 153 165
-
(2004)
MolMicrobiol
, vol.53
, pp. 153-165
-
-
Rappleye, C.A.1
Engle, J.T.2
Goldman, W.E.3
-
43
-
-
4444270633
-
A small, cysteine-rich protein secreted by Fusarium oxysporum during colonization of xylem vessels is required for I-3-mediated resistance in tomato
-
Rep M. van der Does H.C. Meijer M. van Wijk R. Houterman P.M. Dekker H.L. de Koster C.G. Cornelissen B.J. 2004 A small, cysteine-rich protein secreted by Fusarium oxysporum during colonization of xylem vessels is required for I-3-mediated resistance in tomato MolMicrobiol 53 1373 1383
-
(2004)
MolMicrobiol
, vol.53
, pp. 1373-1383
-
-
Rep, M.1
Van Der Does, H.C.2
Meijer, M.3
Van Wijk, R.4
Houterman, P.M.5
Dekker, H.L.6
De Koster, C.G.7
Cornelissen, B.J.8
-
44
-
-
0034016036
-
Chasing the dream: Plant EST microarrays
-
Richmond T. Somerville S. 2000 Chasing the dream: plant EST microarrays CurrOpinPlant Biol 3 108 116
-
(2000)
CurrOpinPlant Biol
, vol.3
, pp. 108-116
-
-
Richmond, T.1
Somerville, S.2
-
45
-
-
0037698964
-
Fusarium as a model for studying virulence in soilborne plant pathogens
-
Roncero M.I.G. Hera C. Ruiz-Rubio M. Maceira F.I.G. Madrid M.P. Caracuel Z. Calero F. Delgado-Jarana J. Roldan-Rodriguez R. Martinez-Rocha A.L. Velasco C. Roa J. Martin-Urdiroz M. Cordoba D. Di Pietro A. 2003 Fusarium as a model for studying virulence in soilborne plant pathogens PhysiolMolPlant Pathol 62 87 98
-
(2003)
PhysiolMolPlant Pathol
, vol.62
, pp. 87-98
-
-
Roncero, M.I.G.1
Hera, C.2
Ruiz-Rubio, M.3
MacEira, F.I.G.4
Madrid, M.P.5
Caracuel, Z.6
Calero, F.7
Delgado-Jarana, J.8
Roldan-Rodriguez, R.9
Martinez-Rocha, A.L.10
Velasco, C.11
Roa, J.12
Martin-Urdiroz, M.13
Cordoba, D.14
Di Pietro, A.15
-
47
-
-
0037782279
-
Systemic gene expression in Arabidopsis during an incompatible interaction with Alternaria brassicicola
-
Schenk P.M. Kazan K. Manners J.M. Anderson J.P. Simpson R.S. Wilson I.W. Somerville S.C. Maclean D.J. 2003 Systemic gene expression in Arabidopsis during an incompatible interaction with Alternaria brassicicola Plant Physiol 132 999 1010
-
(2003)
Plant Physiol
, vol.132
, pp. 999-1010
-
-
Schenk, P.M.1
Kazan, K.2
Manners, J.M.3
Anderson, J.P.4
Simpson, R.S.5
Wilson, I.W.6
Somerville, S.C.7
MacLean, D.J.8
-
50
-
-
0028072757
-
A modified hot borate method significantly enhances the yield of high-quality RNA from cotton (Gossypium-hirsutum L.)
-
Wan C.Y. Wilkins T.A. 1994 A modified hot borate method significantly enhances the yield of high-quality RNA from cotton (Gossypium-hirsutum L.) Anal Biochem 223 7 12
-
(1994)
Anal Biochem
, vol.223
, pp. 7-12
-
-
Wan, C.Y.1
Wilkins, T.A.2
-
51
-
-
1542348962
-
Fusarium species and Fusarium wilt pathogens associated with native Gossypium populations in Australia
-
Wang B. Brubaker C.L. Burdon J.J. 2004 Fusarium species and Fusarium wilt pathogens associated with native Gossypium populations in Australia MycolRes 108 35 44
-
(2004)
MycolRes
, vol.108
, pp. 35-44
-
-
Wang, B.1
Brubaker, C.L.2
Burdon, J.J.3
-
53
-
-
24044491297
-
Microarray analysis reveals vegetative molecular phenotypes of Arabidopsis flowering-time mutants
-
Wilson I.W. Kennedy G.C. Peacock J.W. Dennis E.S. 2005 Microarray analysis reveals vegetative molecular phenotypes of Arabidopsis flowering-time mutants Plant Cell Physiol 46 1190 1201
-
(2005)
Plant Cell Physiol
, vol.46
, pp. 1190-1201
-
-
Wilson, I.W.1
Kennedy, G.C.2
Peacock, J.W.3
Dennis, E.S.4
|