Multiple intercontinental dispersals shaped the distribution area of Hordeum (Poaceae)

New Phytologist

Volumn 169, Issue 3, 2006, Pages 603-614

  Blattner, Frank R ^a  

^a LEIBNIZ INSTITUTE OF PLANT GENETICS AND CROP PLANT RESEARCH IPK   (Germany)

Author keywords

Biogeography; Hordeum (Poaceae, Triticeae); Long distance dispersal; Phylogeny; Vicariance

Indexed keywords

PLANT DNA;

BIOGEOGRAPHY; DISPERSAL; GRASS; PHYLOGENY; VICARIANCE;

ARTICLE; BARLEY; CHEMISTRY; CLASSIFICATION; GENETICS; GEOGRAPHY; NUCLEOTIDE SEQUENCE; PHYLOGENY; PHYSIOLOGY; PLANT SEED; SEQUENCE ALIGNMENT;

BASE SEQUENCE; DNA, PLANT; GEOGRAPHY; HORDEUM; PHYLOGENY; SEEDS; SEQUENCE ALIGNMENT;

HORDEUM; HORDEUM VULGARE SUBSP. VULGARE; POACEAE; PSATHYROSTACHYS; TRITICEAE;

EID: 33645094639     PISSN: 0028646X     EISSN: 14698137     Source Type: Journal    
DOI: 10.1111/j.1469-8137.2005.01610.x     Document Type: Article

References (64)

1. Baldwin BG Sanderson MJ 1998 Age and rate diversification of the Hawaiian silversword alliance (Compositae) Proceedings of the National Academy of Sciences of the USA 95 9402 9406
2. Baum BR 1992 Combining trees as a way of combining data for phylogenetic inference, and the desirability of combining gene trees Taxon 41 3 10
3. Baum BR Johnson DA 2003 The South African Hordeum capense is more closely related to some American Hordeum species than to the European Hordeum secalinum: a perspective based on the 5S rDNA units (Triticeae: Poaceae) Canadian Journal of Botany 81 1 11
4. Bininda-Emonds ORP 2004 The evolution of supertrees Trends in Ecology and Evolution 19 315 322
5. Bininda-Emonds ORP Bryant HN 1998 Properties of matrix representation with parsimony analyses Systematic Biology 47 497 508
6. Bininda-Emonds ORP Gittleman JL Steel MA 2002 The (super) tree of life: procedures, problems, and prospects Annual Reviews in Ecology and Systematics 33 265 289
7. Blattner FR 2004 Phylogenetic analysis of Hordeum (Poaceae) as inferred by nuclear rDNA ITS sequences Molecular Phylogenetics and Evolution 33 289 299
8. von Bothmer R Jacobsen N Baden C Jørgensen RB Linde-Laursen I 1995 An ecogeographical study of the genus Hordeum 2nd edn Rome, Italy IPGRI
9. Boufford DE Spongberg SA 1983 Eastern Asian-eastern North American phytogeographic relationships-a history from the time of Linnaeus to the twentieth century Annals of the Missouri Botanical Garden 70 423 439
10. Coleman M Liston A Kadereit JW Abbott RJ 2003 Repeat intercontinental dispersal and Pleistocene speciation in disjunct Mediterranean and desert Senecio (Asteraceae) American Journal of Botany 90 1446 1454
11. Davis CC Bell CD Mathews S Donoghue MJ 2002 Laurasian migration explains Gondwana disjunctions: Evidence from Malpighiaceae Proceedings of the National Academy of Sciences of the USA 99 6833 6387
12. De Bustos A Cuadrado A Soler C Jouve N 1996 Physical mapping of repetitive DNA sequences and 5S and 18-26S rDNA in five wild species of the genus Hordeum Chromosome Research 4 491 499
13. Doebley J von Bothmer R Larson S 1992 Chloroplast DNA variation and the phylogeny of Hordeum (Poaceae) American Journal of Botany 79 576 584
14. El-Rabey HA Badr A Schäfer-Pregl R Martin W Salamini F 2002 Speciation and species separation in Hordeum L. (Poaceae) resolved by discontinuous molecular markers Plant Biology 4 567 575
15. Engler A 1879 Versuch einer Entwicklungsgeschichte der extratropischen Florengebiete der nördlichen Hemisphäre Leipzig, Germany Engelmann.
16. Fuertes-Aguilar J Ray MF Francisco-Ortega J Santos-Guerra A Jansen RK 2002 Molecular evidence from chloroplast and nuclear markers for multiple colonizations of Lavatera (Malvaceae) in the Canary Islands Systematic Botany 27 74 83
17. Gaut BS 2002 Evolutionary dynamics of grass genomes New Phytologist 154 15 28
18. Givnish TJ Millam KC Evans TM Hall JC Pires JC Berry PE Sytsma KJ 2004 Ancient vicariance or recent long-distance dispersal? Inferences about phylogeny and South American-African disjunctions in Rapateaceae and Bromeliaceae based on ndhF sequence data. International Journal of Plant Sciences Supplement 165 35 54
19. Graham A 2003 Geohistory models and Cenozoic paleoenvironments of the Caribbean region Systematic Botany 28 378 386
20. Grass Phylogeny Working Group 2001 Phylogeny and subfamilial classification of the grasses (Poaceae) Annals of the Missouri Botanical Garden 88 373 457
21. von Hagen KB Kadereit JW 2001 The phylogeny of Gentianella (Gentianaceae) and its colonization of the southern hemisphere as revealed by nuclear and chloroplast DNA sequence variation Organisms, Diversity and Evolution 1 61 79
22. von Hagen KB Kadereit JW 2003 The diversification of Halenia (Gentianaceae): Ecological opportunity versus key innovation Evolution 57 2507 2518
23. Hedges SB Kumar S 2004 Precision of molecular time estimates Trends in Genetics 20 242 247
24. van Heusden AW Bachmann K 1992 Genetic differentiation of Microseris pygmaea (Asteraceae, Lactuceae) studied with DNA amplification from arbitrary primers (RAPDs) Acta Botanica Neerlandica 41 385 395
25. del Hoyo J Elliott A Sargatal J eds 1996 Handbook of the birds of the world vol. 3 Barcelona, Spain Lynx Edicions
26. Hsiao C Jacobs SWL Chatterton NJ Asay KH 1999 A molecular phylogeny of the grass family (Poaceae) based on the sequences of the nuclear ribosomal DNA (ITS) Australian Systematic Botany 11 667 688
27. Komatsuda T Tanno K Salomon B Bryngelsson T von Bothmer R 1999 Phylogeny in the genus Hordeum based on nucleotide sequences closely linked to the vrs1 locus (row number of spikelets) Genome 42 973 981
28. Komatsuda T Salomon B von Bothmer R 2002 A new molecular tool for studying the nuclear genome in Triticeae In Hérnandez P Moreno MT Cubero JI Martin A eds Triticeae IV Seville, Spain Junta de Andálusia 57 62
29. Linde-Laursen I von Bothmer R Jacobsen N 1992 Relationships in the genus Hordeum: Giemsa C-banded karyotypes Hereditas 116 111 116
30. Liston A Kadereit JW 1995 Chloroplast DNA evidence for introgression and long distance dispersal in the desert annual Senecio flavus (Asteraceae) Plant Systematics and Evolution 197 33 41
31. Lohwasser U Granda A Blattner FR 2004 Phylogenetic analysis of Microseris (Asteraceae), including a newly discovered Andean population from Peru Systematic Botany 29 774 780
32. Maddison WP 1997 Gene trees in species trees Systematic Biology 46 523 536
33. Morrell PL Porter JM Friar EA 2000 Intercontinental dispersal: the origin of the widespread South American plant species Gilia laciniata (Polemoniaceae) from a rare California and Oregon coastal endemic Plant Systematics and Evolution 224 13 32
34. Naeem S Knops JMH Tilman D Howe KM Kennedy T Gale S 2000 Plant diversity increases resistance to invasion in the absence of covarying extrinsic factors Oikos 91 97 108
35. Nishikawa T Salomon B Komatsuda T von Bothmer R Kasowaki K 2002 Molecular phylogeny of the genus Hordeum using three chloroplast DNA sequences Genome 45 1157 1166
36. Petersen G Seberg O 1997 Phylogenetic analysis of the Triticeae (Poaceae) based on rpoA sequence data Molecular Phylogenetics and Evolution 7 217 230
37. Petersen G Seberg O 2003 Phylogenetic analysis of the diploid species of Hordeum (Poaceae) and a revised classification of the genus Systematic Botany 28 293 306
38. Petersen G Seberg O 2004 On the origin of the tetraploid species Hordeum capense and H. secalinum (Poaceae) Systematic Botany 29 862 873
39. Posada D Crandall KA 1998 modeltest : testing the model of DNA substitution Bioinformatics 14 817 818
40. Ragan MA 1992 Phylogenetic inference based on matrix representation of trees Molecular Phylogenetics and Evolution 1 53 58
41. Raven PH 1963 Amphitropical relationships in the floras of North and South America Quarterly Reviews in Biology 38 151 177
42. Raven PH Axelrod DI 1974 Angiosperm biogeography and past continental movements Annals of the Missouri Botanical Garden 61 539 673
43. Riddle BR Hafner DJ Alexander LF Jaeger JR 2001 Cryptic vicariance in the historical assembly of a Baja California peninsular desert biota Proceedings of the National Academy of Sciences of the USA 97 14438 14443
44. Ronquist F 1996 diva, version 11Computer program and manual Uppsala, Sweden Uppsala University
45. Ronquist F 1997 Dispersal-vicariance analysis: a new approach to the quantification of historical biogeography Systematic Biology 46 195 203
46. Ronquist F Huelsenbeck JP 2003 mrbayes 3: Bayesian phylogenetic inference under mixed models Bioinformatics 19 1572 1574
47. Sakai AK Allendorf FW Holt JS Lodge DM Molofsky J With KA Baughman S Cabin RJ Cohen JE Ellstrand NC McCauley DE O'Neil P Parker IM Thompson JN Weller SG 2001 The population biology of invasive species Annual Reviews in Ecology and Systematics 32 305 332
48. Sanderson MJ 1997 A nonparametric approach to estimating divergence times in the absence of rate constancy Molecular Biology and Evolution 14 1218 1231
49. Sanderson MJ 2002 Estimating absolute rates of molecular evolution and divergence times: a penalized likelihood approach Molecular Biology and Evolution 19 101 109
50. Sanderson MJ Purvis A Henze C 1998 Phylogenetic supertrees: assembling the trees of life Trends in Ecology and Evolution 13 105 109
51. Schubert I Wobus U 1985 In situ hybridization confirms jumping nucleolus organizing regions in Allium Chromosoma 92 143 148
52. Swofford DL 2003 paup *Phylogenetic analysis using parsimony (* and other methods) version 4 Sunderland, MA, USA Sinauer Associates
53. Taketa S Harrison GE Heslop-Harrison JS 1999 Comparative physical mapping of the 5S and 18S-25S rDNA in nine wild Hordeum species and cytotypes Theoretical and Applied Genetics 98 1 9
54. Taketa S Ando H Takeda K von Bothmer R 2001 Physical location of 5S and 18S-25S rDNA in Asian and American diploid Hordeum species with the I genome Heredity 86 522 530
55. Tiffney BH 1985 The Eocene North Atlantic land bridge: its importance in Tertiary and modern phytogeography of the Northern Hemisphere Journal of the Arnold Arboretum 66 243 273
56. Ting CT Tsaur SC Wu CI 2000 The phylogeny of closely related species as revealed by the genealogy of a speciation gene Odysseus Proceedings of the National Academy of Sciences of the USA 97 5313 5316
57. Vargas P Baldwin BG Con stance L 1998 Nuclear ribosomal DNA evidence for a western North American origin of Hawaiian and South American species of Sanicula (Apiaceae) Proceedings of the National Academy of Sciences of the USA 95 235 240
58. Vijverberg K Mes THM Bachmann K 1999 Chloroplast DNA evidence for the evolution of Microseris (Asteraceae) in Australia and New Zealand after long-distance dispersal from western North America American Journal of Botany 86 1448 1463
59. Wagner WL Funk VA eds 1995 Hawaiian biogeography: evolution on a hot spot archipelago Washington, DC, USA Smithonian Institution Press
60. Wendel JF Schnabel A Seelanan T 1995 Bidirectional interlocus concerted evolution following allopolyploid speciation in cotton (Gossypium) Proceedings of the National Academy of Sciences of the USA 92 280 284
61. Winkworth RC Robertson AW Grau J Lockhart PJ 2002 The origins and evolution of the genus Myosotis L. (Boraginaceae) Molecular Phylogenetics and Evolution 24 180 193
62. Wolfe KH Gouy M Yang YW Sharp PM Li WH 1989 Date of the monocot-dicot divergence estimated from chloroplast DNA sequence data Proceedings of the National Academy of Sciences of the USA 86 6201 6205
63. Wright SD Yong CG Dawson JW Whittaker DJ Gardner RC 2000 Riding the ice age El Niño? Pacific biogeography and evolution of Metrosideros subg. Metrosideros (Myrtaceae) inferred from nuclear ribosomal DNA Proceedings of the National Academy of Sciences of the USA 97 4118 4123
64. Zohary D Hopf M 2000 Domestication of plants in the Old World 3rd edn