Isolation and characterization of Halomonas sp. strain IMPC, a p-coumaric acid-metabolizing bacterium that decarboxylates other cinnamic acids under hypersaline conditions

FEMS Microbiology Letters

Volumn 255, Issue 1, 2006, Pages 108-114

  Abdelkafi, Slim ^a,b   Labat, Marc ^a   Casalot, Laurence ^a   Chamkha, Mohamed ^b   Sayadi, Sami ^b  

^a INSTITUT DE RECHERCHE POUR LE DÉVELOPPEMENT   (France)

^b CENTRE DE BIOTECHNOLOGIE DE SFAX   (Tunisia)

Author keywords

Aromatic compounds; Halomonas sp.; Halophilic; p coumaric acid; Table olive fermentation

Indexed keywords

4 HYDROXYBENZALDEHYDE; 4 HYDROXYBENZOIC ACID; BENZOIC ACID; CINNAMIC ACID; HYDROGEN; HYDROXIDE; PARA COUMARIC ACID; PROTOCATECHUIC ACID; RNA 16S; SODIUM CHLORIDE;

ARTICLE; BACTERIAL GENE; BACTERIAL STRAIN; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATION; CATABOLISM; FATTY ACID OXIDATION; FERMENTATION; HALOMONAS; HALOPHILIC BACTERIUM; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL;

ANTI-BACTERIAL AGENTS; CINNAMATES; COUMARIC ACIDS; DECARBOXYLATION; DNA, BACTERIAL; HALOMONAS; SODIUM CHLORIDE;

BACTERIA (MICROORGANISMS); HALOMONAS; HALOMONAS ELONGATA; HALOMONAS EURIHALINA; NEGIBACTERIA;

EID: 33645061764     PISSN: 03781097     EISSN: 15746968     Source Type: Journal    
DOI: 10.1111/j.1574-6968.2005.00061.x     Document Type: Article

References (30)

1. Abdelkafi S Chamkha M Casalot L Sayadi S Labat M 2005 Isolation and characterization of a novel Bacillus sp., strain YAS1, capable of transforming tyrosol under hypersaline conditions FEMS Microbiol Lett 252 79 84
2. Allouche N Damak M Ellouz R Sayadi S 2004a Use of whole cells of Pseudomonas aeruginosa for synthesis of the antioxidant hydroxytyrosol via conversion of tyrosol Appl Environ Microbiol 70 2105 2109
3. Allouche N Feki I Sayadi S 2004b Toward a high yield recovery of antioxidants and purified hydroxytyrosol from olive mill wastewater J Agric Food Chem 52 267 273
4. Altschul SF Madden TL Schäffer AA Zhang Z Miller W Lipman DJ 1997 Gapped Blast and PSI-BLAST a new generation of protein database search programs Nucleic Acids Res 25 3389 3402
5. Alva V Peyton BM 2003 Phenol and catechol biodegradation by the haloalkaliphile Halomonas campisalis influence of pH and salinity Environ Sci Technol 37 4397 4402
6. Amat AM Arques A Miranda MA 1999 p-Coumaric acid photodegradation with solar light, using a 2,4,6-triphenylpyrylium salt as photosensitizer, a comparison with other oxidation methods Appl Catal B 23 205 214
7. Beltran-Heredia J Torregrosa J Dominguez JR Garcia J 2000 Aerobic biological treatment of black table olive washing wastewaters effect of an ozonation stage Proc Biochem 35 1183 1190
8. Benson DA Boguski MS Lipman DJ Oullette BFF Rapp BA Wheeler DL 1999 GenBank Nucleic Acids Res 27 12 17
9. Bouaziz M Chamkha M Sayadi S 2004 Comparative study on phenolic content and antioxidant activity during maturation of the olive cultivar chemlali from Tunisia J Agric Food Chem 52 5476 5481
10. Chamkha M Patel BKC Garcia JL Labat M 2001 Isolation of a cinnamic acid-metabolising Clostridium glycolicum strain from oil mill wastewaters and emendation of the species description Int J Syst Evol Microbiol 51 2049 2054
11. Delneri D Degrassi G Rizzo R Bruschi CV 1995 Degradation of trans-ferulic and p-coumaric acid by Acinetobacter calcoaceticus DSM 586 Biochim Biophys Acta 1244 363 367
12. Estrada Alvarado I Lomascolo A Navarro D Delattre M Asther M Lesage-Meessen L 2001 Evidence of a new biotransformation pathway of p-coumaric acid into p-hydroxybenzaldehyde in Pycnoporus cinnabarinus Appl Microbiol Biotechnol 57 725 730
13. Fardeau ML Ollivier B Patel BKC Magot M Thomas P Rimbault A Rocchiccioli F Garcia JL 1997 Thermotoga hypogea sp. nov., a xylanolytic, thermophilic bacterium from an oil-producing well Int J Syst Bacteriol 47 1013 1019
14. Felsenstein J 1985 Confidence limits on phylogenies an approach using the bootstrap Evolution 39 783 791
15. Garcia MT Mellado JC Ventosa A 2004 Halomonas organivorans sp. nov., a moderate halophile able to degrade aromatic compounds Int J Syst Evol Microbiol 54 1723 1728
16. Hall TA 1999 BioEdit a user-friendly biological sequence alignment editor and analysis program for windows 95/98 NT Nucleic Acids Symp Ser 41 95 98
17. Hinteregger C Streichsbier F 1997 Halomonas sp., a moderately halophilic strain, for biotreatment of saline phenolic wastewater Biotechnol Lett 9 1099 1102
18. Javor BJ 1989 Hypersaline Environments. Microbiology and Biogeochemistry Springer Berlin
19. Jukes TH Cantor CR 1969 Evolution of protein molecules Mammalian Protein Metabolism Munro HN ed), pp. 211 232 Academic Press New York
20. Kushner DJ 1978 Life in high salt and solute concentrations halophilic bacteria Microbial Life in Extreme Environments Kushner DJ ed), pp. 317 368 Academic Press London
21. Logan NA Berkeley RCW 1984 Identification of Bacillus strains using the API system J Gen Microbiol 130 1871 1882
22. Maidak BL Cole JR Lilbrum TG Parker CT Saxman PR Jr. Farris RJ Garrity GM Olsen GJ Schmidt TM Tiedje JM 2001 The RDP-II (Ribosomal Database Project) Nucleic Acids Res 29 173 174
23. Masai E Harada K Peng X Kitayama H Katayama Y Masso M 2002 Cloning and characterization of ferulic acid catabolic genes of Sphingomonas paucimobilis SYK-6 Appl Environ Microbiol 68 4416 4424
24. Mesbah M Premachandran U Whitman WB 1989 Precise measurement of the G+C content liquid chromatography Int J Syst Bacteriol 39 159 167
25. Peng X Misawa N Harayama S 2003 Isolation and characterization of thermophilic bacilli degrading cinnamic, 4-coumaric, and ferulic acids Appl Environ Microbiol 69 1417 1427
26. Saitou N Nei M 1987 The neighbor-joining method a new method for reconstructing phylogenetic trees Mol Biol Evol 4 406 425
27. Sayadi S Allouche N Jaoua M Alaoui F 2000 Determinal effects of high molecular-mass polyphenols on olive mill wastewater biotreatment Proc Biochem 35 725 735
28. Ventosa A 1988 Taxonomy of moderately halophilic heterotrophic Eubacteria Halophilic Bacteria Vol. 1 Rodriguez-Valera F ed), pp. 71 84 CRC Press Boca Raton, FL
29. Widdel F Pfenning N 1981 Studies on dissimilatory sulphate-reducing bacteria that decompose fatty acids. Isolation of new sulphate reducing bacteria enriched with acetate from saline environnements. Description of Desulfobacter postgatei gen. nov Arch Microbiol 129 395 400
30. Winker S Woese CR 1991 A definition of the domains Archea, Bacteria and Eucarya in terms of small subunit ribosomal rRNA characteristics Syst Appl Microbiol 13 161 165