The relative influence of natural selection and geography on gene flow in guppies

Molecular Ecology

Volumn 15, Issue 1, 2006, Pages 49-62

  Crispo, Erika ^a   Bentzen, Paul ^b   Reznick, David N ^c,e   Kinnison, Michael T ^d   Hendry, Andrew P ^a  

^a MCGILL UNIVERSITY   (Canada)

^b DALHOUSIE UNIVERSITY   (Canada)

^c UNIVERSITY OF CALIFORNIA   (United States)

^d UNIVERSITY OF MAINE   (United States)

^e UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Ecological speciation; F ST; Isolation by distance; Migration; Parapatry; Reproductive isolation

Indexed keywords

MICROSATELLITE DNA;

ANIMAL; ARTICLE; COMPARATIVE STUDY; CYPRINODONTIFORMES; DEMOGRAPHY; ECOSYSTEM; FEMALE; GENE FREQUENCY; GENETIC SELECTION; GENETICS; GEOGRAPHY; MALE; POPULATION GENETICS; TRINIDAD AND TOBAGO;

ANIMALS; DEMOGRAPHY; ECOSYSTEM; FEMALE; GENE FREQUENCY; GENETICS, POPULATION; GEOGRAPHY; MALE; MICROSATELLITE REPEATS; POECILIA; SELECTION (GENETICS); TRINIDAD AND TOBAGO;

CYPRINODONTIFORMES; POECILIA RETICULATA;

EID: 33645047684     PISSN: 09621083     EISSN: 1365294X     Source Type: Journal    
DOI: 10.1111/j.1365-294X.2005.02764.x     Document Type: Article

References (106)

1. Austin JD Lougheed SC Boag PT 2004 Controlling for the effects of history and nonequilibrium conditions in northern bullfrog (Rana catesbeiana) populations Genetics 168 1491 1506
2. Becher SA Magurran AE 2000 Gene flow in Trinidadian guppies Journal of Fish Biology 56 241 249
3. Becher SA Russell ST Magurran AE 2002 Isolation and characterization of polymorphic microsatellites in the Trinidadian guppy (Poecilia reticulata) Molecular Ecology Notes 2 456 458
4. Beerli P Felsenstein J 1999 Maximum-likelihood estimation of migration rates and effective population numbers in two populations using a coalescent approach Genetics 152 763 773
5. Beerli P Felsenstein J 2001 Maximum-likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach Proceedings of the National Academy of Sciences, USA 98 4563 4568
6. Breden F Scott M Michel E 1987 Genetic differentiation for anti-predator behaviour in the Trinidadian guppy, Poecilia reticulata Animal Behaviour 35 618 620
7. Bronikowski AM Clark ME Rodd FH Reznick DN 2002 Population-dynamic consequences of predator-induced life history in the guppy (Poecilia reticulata) Ecology 83 2194 2204
8. Carvalho GR Shaw PW Magurran AE Seghers BH 1991 Marked genetic divergence revealed by allozymes among populations of the guppy Poecilia reticulata (Poeciliidae), in Trinidad Biological Journal of the Linnean Society 42 389 405
9. Castellano S Balletto E 2002 Is the partial Mantel test inadequate? Evolution 56 1871 1873
10. Chapman RW Sedberry GR Koenig CC Eleby BM 1999 Stock identification of gag, Mycteroperca microlepis, along the southeast coast of the United States Marine Biotechnology 1 137 146
11. Cooper ML 2000 Random amplified polymorphic DNA analysis of southern brown bandicoot (Isoodon obesulus) populations in Western Australia reveals genetic differentiation related to environmental variables Molecular Ecology 9 469 479
12. Coyne JA Orr HA 2004 Speciation Sinauer Associates Sunderland, Massachusetts
13. Crispo E 2005 Factors influencing gene flow in guppies MSc Thesis McGill University, Montréal, Québec
14. Eakley AL Houde AE 2004 Possible role of female discrimination against 'redundant' males in the evolution of colour pattern polymorphism in guppies Proceedings of the Royal Society of LondonSeries B, Biological Sciences 271 S299 S301
15. Ebert D Haag C Kirkpatrick M Riek M Hottinger JW Pajunen VI 2002 A selective advantage to immigrant genes in a Daphnia metapopulation Science 295 485 488
16. Emelianov I Marec F Mallet J 2004 Genomic evidence for divergence with gene flow in host races of the larch budmoth Proceedings of the Royal Society of LondonSeries B, Biological Sciences 271 97 105
17. Endler JA 1978 A predator's view of animal color patterns Evolutionary Biology 11 319 364
18. Endler JA 1980 Natural selection on color patterns in Poecilia reticulata Evolution 34 76 91
19. Endler JA 1983 Natural and sexual selection on color patterns in poeciliid fishes Environmental Biology of Fishes 9 173 190
20. Endler JA 1987 Predation, light intensity, and courtship behaviour in Poecilia reticulata Animal Behaviour 35 1376 1385
21. Endler JA 1995 Multiple-trait coevolution and environmental gradients in guppies Trends in Ecology & Evolution 10 22 29
22. Endler JA Houde AE 1995 Geographic variation in female preference for male traits in Poecilia reticulata Evolution 49 456 468
23. Englund SR O'Brien JJ Clark DB 1999 Evaluation of digital and film hemispherical photography and spherical densiometry for measuring forest light environments Canadian Journal of Forest Research 30 1999 2005
24. Ghalambor CK Reznick DN Walker JA 2004 Constraints on adaptive evolution: the functional trade-off between reproduction and fast-start swimming performance in the Trinidadian guppy (Poecilia reticulata) American Naturalist 164 38 50
25. Godin J-GJ McDonough HE 2003 Predator preference for brightly colored males in the guppy: a viability cost for a sexually selected trait Behavioral Ecology 14 194 200
26. Goudet J 2001 fstat (version 293): A program to estimate and test gene diversities and fixation indices Available from
27. Grether GF Millie DF Bryant MJ Reznick DN Mayea W 2001a Rain forest canopy cover, resource availability, and life history evolution in guppies Ecology 82 1546 1559
28. Grether GF Hudson J Endler JA 2001b Carotenoid scarcity, synthetic pteridine pigments and the evolution of sexual colouration in guppies (Poecilia reticulata) Proceedings of the Royal Society of LondonSeries B, Biological Sciences 268 1245 1253
29. Hardy OJ Vekemans X 2002 spagedi : a versatile computer program to analyse spatial genetic structure at the individual or population levels Molecular Ecology Notes 2 618 620
30. Hardy OJ Charbonnel N Fréville H Heuertz M 2003 Microsatellite allele sizes: a simple test to assess their significance on genetic differentiation Genetics 163 1467 1482
31. Haskins CP Haskins EF McLaughlin JJA Hewitt RE 1961 Polymorphism and population structure in Lebistes reticulatus, an ecological study In Vertebrate Speciation (ed Blair WF pp 320 395 University of Texas Press Austin, Texas
32. Hendry AP 2004 Selection against migrants contributes to the rapid-evolution of reproductive isolation Evolutionary Ecology Research 6 1219 1236
33. Hendry AP Taylor EB 2004 How much of the variation in adaptive divergence can be explained by gene flow? An evaluation use lake-stream stickleback pairs Evolution 58 2319 2331
34. Hendry AP Day T Taylor EB 2001 Population mixing and the adaptive divergence of quantitative characters in discrete populations: a theoretical framework for empirical tests Evolution 55 459 466
35. Hendry AP Taylor EB McPhail JD 2002 Adaptive divergence and the balance between selection and gene flow: lake and stream stickleback in the Misty system Evolution 56 1199 1216
36. Herdman EJE Kelly CD Godin J-GJ 2004 Male mate choice in the guppy (Poecilia reticulata): do males prefer larger females as mates? Ethology 110 97 111
37. Houde AE 1997 Sex, Color and Mate Choice in Guppies Princeton University Press Princeton, New Jersey
38. Hughes KA Du L Rodd FH Reznick DN 1999 Familiarity leads to female mate preference for novel males in the guppy, Poecilia reticulata Animal Behaviour 58 907 916
39. Ingvarsson PK Whitlock MC 2000 Heterosis increases the effective migration rate Proceedings of the Royal Society of LondonSeries B, Biological Sciences 267 1321 1326
40. Kelley JL Magurran AE 2003 Effects of relaxed predation pressure on visual predator recognition in the guppy Behavioral Ecology and Sociobiology 54 225 232
41. King RB Lawson R 1995 Color-pattern variation in Lake Erie water snakes: the role of gene flow Evolution 49 885 896
42. Kodric-Brown A 1989 Dietary carotenoids and male mating success in the guppy: an environmental component to female choice Behavioral Ecology and Sociobiology 25 393 401
43. Kondolf GM Li S 1992 The pebble count technique for quantifying surface bed material size in instream flow studies Rivers 3 80 87
44. Lemmon PE 1957 A new instrument for measuring forest overstory density Journal of Forestry 55 667 668
45. Lenormand T 2002 Gene flow and the limits to natural selection Trends in Ecology & Evolution 17 183 189
46. Liley NR Seghers BH 1975 Factors influencing the morphology and behaviour of guppies in Trinidad In Function and Evolution in Behaviour (eds Baerends G Beer C Manning A pp 92 118 Clarendon Press Oxford
47. Lu G Bernatchez L 1999 Correlated trophic specialization and genetic divergence in sympatric lake whitefish ecotypes (Coregonus clupeaformis): support for the ecological speciation hypothesis Evolution 53 1491 1505
48. Luyten PH Liley NR 1991 Sexual selection and competitive mating success of male guppies (Poecilia reticulata) from four Trinidad populations Behavioral Ecology and Sociobiology 28 329 336
49. Magurran AE 1998 Population differentiation without speciation Philosophical Transactions of the Royal Society of LondonSeries B, Biological Sciences 353 275 286
50. Magurran AE Seghers BH 1990 Population differences in predator recognition and attack cone avoidance in the guppy Poecilia reticulata Animal Behaviour 40 443 452
51. Magurran AE Seghers BH Carvalho GR Shaw PW 1992 Behavioural consequences of an artificial introduction of guppies (Poecilia reticulata) in N. Trinidad: evidence for the evolution of anti-predator behaviour in the wild Proceedings of the Royal Society of LondonSeries B, Biological Sciences 248 117 122
52. Magurran AE Seghers BH Shaw PW Carvalho GR 1995 The behavioural diversity and the evolution of guppy, Poecilia reticulata, populations in Trinidad Advances in the Study of Behaviour 24 155 202
53. Manel S Gaggiotti OE Waples RS 2005 Assignment methods: matching biological questions with appropriate techniques Trends in Ecology & Evolution 20 136 142
54. Mantel N 1967 The detection of disease clustering and a generalized regression approach Cancer Research 27 209 220
55. Michalakis Y Excoffier L 1996 Genetic estimation of population subdivision using distances between alleles with special reference for microsatellite loci Genetics 142 1061 1064
56. Millar NP Reznick DN Kinnison MT Hendry AP 2006 Disentangling the selective factors that act on male colour in wild guppies Oikas in press
57. Miller MP 1997 Tools for Population Genetic Analysis (tfpga) 13: A Windows program for the analysis of allozyme and molecular population genetic data Computer software distributed by author
58. Nicoletto PF 1996 The influence of water velocity on the display behavior of male guppies, Poecilia reticulata Behavioral Ecology 7 272 278
59. Nicoletto PF Kodric-Brown A 1999 The relationship among swimming performance, courtship behavior, and carotenoid pigmentation of guppies in four rivers in Trinidad Environmental Biology of Fishes 55 227 235
60. Nosil P 2004 Reproductive isolation caused by visual predation on migrants between divergent environments Proceedings of the Royal Society of LondonSeries B, Biological Sciences 271 1521 1528
61. Nosil P Crespi BJ 2004 Does gene flow constrain adaptive divergence or vice versa? A test using ecomorphology and sexual isolation in Timema cristinae walking-sticks Evolution 58 102 112
62. Nosil P Vines TH Funk DJ 2005 Reproductive isolation caused by natural selection against immigrants from divergent habitats Evolution 59 705 719
63. O'Steen S Cullum AJ Bennett AF 2002 Rapid evolution of escape ability in Trinidadian guppies (Poecilia reticulata) Evolution 56 776 784
64. Ogden R Thorpe RS 2002 Molecular evidence for ecological speciation in tropical habitats Proceedings of the National Academy of Sciences, USA 99 13612 13615
65. Paetkau D Slade R Burden M Estoup A 2004 Genetic assignment methods for the direct, real-time estimation of migration rate: a simulation-based exploration of accuracy and power Molecular Ecology 13 55 65
66. Paterson IG Crispo E Kinnison MT Hendry AP Bentzen P 2005 Characterization of tetranucleotide microsatellite markers in guppy (Poecilia reticulata) Molecular Ecology Notes 5 269 271
67. Piry S Alapetite A Cornuet J-M Paetkau D Baudouin L Estoup A 2004 geneclass 2: a software for genetic assignment and first-generation migrant detection Journal of Heredity 95 536 539
68. Poissant J Knight TW Ferguson MM 2005 Nonequilibrium conditions following landscape rearrangement: the relative contribution of past and current hydrological landscape on the genetic structure of a stream-dwelling fish Molecular Ecology 14 1321 1331
69. Pritchard JK Stephens M Donnelly P 2000 Inference of population structure using multilocus genotype data Genetics 155 945 959
70. Rannala B Mountain JL 1997 Detecting immigration by using multilocus genotypes Proceedings of the National Academy of Sciences, USA 94 9197 9221
71. Raufaste N Rousset F 2001 Are partial Mantel tests adequate? Evolution 55 1703 1705
72. Raymond M Rousset F 1995 genepop (version 1.2): population genetics software for exact tests and ecumenicism Journal of Heredity 86 248 249
73. Reznick DN Bryga HA 1987 Life-history evolution in guppies (Poecilia reticulata). 1. Phenotypic and genetic changes in an introduction experiment Evolution 41 1370 1385
74. Reznick DN Bryga HA 1996 Life-history evolution in guppies (Poecilia reticulata: Poeciliidae). V. Genetic basis of parallelism in life histories American Naturalist 147 339 359
75. Reznick DN Butler IVMJ Rodd FH Ross P 1996a Life-history evolution in guppies (Poecilia reticulata). 6. Differential mortality as a mechanism for natural selection Evolution 50 1651 1660
76. Reznick DN Rodd FH Cardenas M 1996b Life-history evolution in guppies (Poecilia reticulata: Poeciliidae). IV. Parallelism in life-history phenotypes American Naturalist 147 319 338
77. Reznick D Butler MJ Rodd FH 2001 Life-history evolution in guppies. VII. The comparative ecology of high- and low-predation environments American Naturalist 157 126 138
78. Reznick D Bryant MJ Bashey F 2002 r- and K-selection revisited: the role of population regulation in life-history evolution Ecology 83 1509 1520
79. Rice WR 1989 Analyzing tables of statistical tests Evolution 43 223 225
80. Riechert SE 1993 Investigation of potential gene flow limitation of behavioral adaptation in an aridlands spider Behavioral Ecology and Sociobiology 32 355 363
81. Rocha LA Robertson DR Roman J Bowen BW 2005 Ecological speciation in tropical reef fishes Proceedings of the Royal Society of LondonSeries B, Biological Sciences 272 573 579
82. Rousset F 1996 Equilibrium values of measures of population subdivision for stepwise mutation processes Genetics 142 1357 1362
83. Rousset F 1997 Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance Genetics 145 1219 1228
84. Rousset F 2002 Partial Mantel tests: reply to Castellano and Balletto Evolution 56 1874 1875
85. Rundle HD 2002 A test of ecologically dependent postmating isolation between sympatric sticklebacks Evolution 56 322 329
86. Rundle HD Nosil P 2005 Ecological speciation Ecology Letters 8 336 352
87. Schluter D 2000 The Ecology of Adaptive Radiation Oxford University Press Oxford
88. Schneider S Kueffer JJ-M Roessli D Excoffier L 1997 arlequin: An exploratory population genetics software environment Computer software distributed by authors
89. Seghers BH 1974 Schooling behavior in the guppy (Poecilia reticulata): an evolutionary response to predation Evolution 28 486 489
90. Shaw PW Carvalho GR Magurran AE Seghers BH 1991 Population differentiation in Trinidadian guppies (Poecilia reticulata): patterns and problems Journal of Fish Biology 39 S203 S209
91. Shaw PW Carvalho GR Seghers BH Magurran AE 1992 Genetic consequences of an artificial introduction of guppies (Poecilia reticulata) in N. Trinidad Proceedings of the Royal Society of LondonSeries B, Biological Sciences 248 111 116
92. Shaw PW Carvalho GR Magurran AE Seghers BH 1994 Factors affecting the distribution of genetic variability in the guppy, Poecilia reticulata Journal of Fish Biology 45 875 888
93. Shikano T Taniguchi N 2002 Heterosis for neonatal survival in the guppy Journal of Fish Biology 60 715 725
94. Slatkin M 1987 Gene flow and the geographic structure of natural populations Science 236 787 792
95. Slatkin M 1993 Isolation by distance in equilibrium and non-equilibrium populations Evolution 47 264 279
96. Smith TB Schneider CJ Holder K 2001 Refugial isolation versus ecological gradients Genetica 112-113 383 398
97. Smith TB Calsbeek R Wayne RK Holder KH Pires D Bardeleben C 2005 Testing alternative mechanisms of evolutionary divergence in an African rain forest passerine bird Journal of Evolutionary Biology 18 257 268
98. Smouse PE Long JC Sokal RR 1986 Multiple regression and correlation extensions of the Mantel test of matrix correspondence Systematic Zoology 35 627 632
99. Stanton ML Galen C Shore J 1997 Population structure along a steep environmental gradient: consequences of flowering time and habitat variation in the snow buttercup, Ranunculus adoneus Evolution 51 71 94
100. van Oosterhout C Trigg RE Carvalho GR et al. 2003 Inbreeding depression and genetic load of sexually selected traits: how the guppy lost its spots Journal of Evolutionary Biology 16 273 281
101. van Oosterhout C Hutchison WF Wills DPM Shipley P 2004 microchecker : software for identifying and correcting genotyping errors in microsatellite data Molecular Ecology Notes 4 535 538
102. Via S 1999 Reproductive isolation between sympatric races of pea aphids. I. Gene flow restriction and habitat choice Evolution 53 1446 1457
103. Via S Bouck AC Skillman S 2000 Reproductive isolation between divergent races of pea aphids on two hosts. II. Selection against migrants and hybrids in the parental environments Evolution 54 1626 1637
104. Weir BS Cockerham CC 1984 Estimating F-statistics for the analysis of population structure Evolution 38 1358 1370
105. ST≠ 1/(4Nm+ 1) Heredity 82 117 125
106. Wright S 1943 Isolation by distance Genetics 28 114 138