Late Quaternary climate change and spatial genetic structure in the shrub Banksia hookeriana

Molecular Ecology

Volumn 15, Issue 4, 2006, Pages 1125-1137

  Krauss, Siegfried L ^a,b   He, Tianhua ^c   Lamont, Byron B ^c   Miller, Ben P ^c,d   Enright, Neal J ^c,d  

^a BOTANIC GARDENS AND PARKS AUTHORITY   (Australia)

^b UNIVERSITY OF WESTERN AUSTRALIA   (Australia)

^c CURTIN UNIVERSITY   (Australia)

^d UNIVERSITY OF MELBOURNE   (Australia)

Author keywords

AFLP; Eneabba sandplain; Hybrids; Kwongan; OSL dating; Phylogeography

Indexed keywords

ANALYSIS OF VARIANCE; ARTICLE; AUSTRALIA; CLIMATE; GENETIC POLYMORPHISM; GENETICS; GEOGRAPHY; METHODOLOGY; PHYLOGENY; PROTEACEAE;

ANALYSIS OF VARIANCE; CLIMATE; GEOGRAPHY; PHYLOGENY; POLYMORPHISM, GENETIC; PROTEACEAE; WESTERN AUSTRALIA;

BANKSIA HOOKERIANA; BANKSIA PRIONOTES;

EID: 33645019643     PISSN: 09621083     EISSN: 1365294X     Source Type: Journal    
DOI: 10.1111/j.1365-294X.2006.02860.x     Document Type: Article

References (71)

1. Adamiec G Aitken MJ 1998 Dose-rate conversion factors: update Ancient TL 16 37 50
2. Aitken MJ 1998 An Introduction to Optical Dating Oxford University Press Oxford
3. Avise JC Arnold J Ball RM et al. 1987 Intraspecific phylogeography: the mitochondrial DNA bridge between population genetics and systematics Annual Review of Ecology and Systematics 18 489 522
4. Barrett LG He TH Lamont BB Krauss SL 2005 Temporal patterns of genetic variation across a 9-year-old aerial seed bank of the shrub Banksia hookeriana (Proteaceae) Molecular Ecology 14 4169 4179
5. Bermingham E Moritz C 1998 Comparative phylogeography: concepts and applications Molecular Ecology 7 367 369
6. Bowler JM Johnston H Olley JM et al. 2003 New ages for human occupation and climatic change at Lake Mungo, Australia Nature 421 837 840
7. Bussell JD Waycot M Chappill JA James SH 2004 Molecular phylogenetic analysis of the evolution of complex hybridity in Isotoma petraea Evolution 56 1296 1302
8. Byrne M Hines B 2004 Phylogeographic analysis of cpDNA variation in Eucalyptus loxophleba (Myrtaceae) Australian Journal of Botany 52 459 470
9. Byrne M Macdonald B 2000 Phylogeography and conservation of three oil mallee taxa, Eucalyptus kochii ssp. kochii, ssp. plenissima and E. horistes Australian Journal of Botany 48 305 312
10. Byrne M Macdonald B Coates DJ 2002 Phylogeographic patterns in chloroplast DNA variation within Acacia acuminata (Leguminosae: Mimosoideae) complex in Western Australia Journal of Evolutionary Biology 15 576 587
11. Byrne M Macdonald B Brand J 2003 Phylogeography and divergence in the chloroplast genome of Western Australian sandalwood (Santalum spicatum) Heredity 91 389 395
12. Coates DJ Carstairs S Hamley VL 2003 Evolutionary patterns and genetic structure in localized and widespread species in the Stylidium caricifolium complex (Stylidiaceae) American Journal of Botany 90 997 1008
13. Deffontaine V Libois R Kotlik P et al. 2005 Beyond the Mediterranean peninsulas: evidence of central European glacial refugia for a temperate forest mammal species, the bank vole (Clethrionomys glareolus) Molecular Ecology 14 1727 1740
14. Doyle JJ 1991 DNA protocols for plants In Molecular Techniques in Taxonomy (eds Hewitt GM Johnston AWB Young JPW pp 101 115 Springer-Verlag Berlin
15. Enright NJ Lamont BB 1992 Survival, growth and water relations of Banksia seedlings on sand mine tailings and adjacent scrub-heath sites Journal of Applied Ecology 29 663 671
16. Enright NJ Lamont BB Marsula R 1996 Canopy seg bank dynamics and optimum fire regime for the highly serotinous shrub, Banksia hookeriana Journal of Ecology 84 9 17
17. Enright NJ Marsula R Lamont BB Wissel C 1998 The ecological significance of canopy seed storage in fire-prone environments: a model for nonsprouting shrubs Journal of Ecology 86 946 959
18. Enright NJ He TH Krauss SL Lamont BB Miller BP 2003 Genetic variation and biogeographic history in the restricted southwestern Australian shrub, Banksia hookeriana Physical Geography 24 358 377
19. Excoffier L Smouse PE Quattro JM 1992 Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction sites Genetics 131 479 491
20. Felsenstein J 2004 phylip (Phylogeny Inference Package), Version 36 Distributed by the author Department of Genome Sciences, University of Washington Seattle
21. Freeman JS Jackson HD Steane DA et al. 2001 Chloroplast DNA phylogeography of Eucalyptus globulus Australian Journal of Botany 49 585 596
22. Froend RH 1987 Investigations into species richness patterns in the Northern sandplain region of western Australia PhD Thesis University of Western Australia, Perth
23. Galbraith RF Roberts RG Laslett GM Yoshida H Olley JM 1999 Optical dating of single and multiple grains of quartz from Jinmium rock shelter, northern Australia: part I, experimental design and statistical models Archaeometry 41 339 364
24. Gill AM 1981 Adaptive responses of Australian vascular plant species to fires In Fire and the Australian Biota (eds Gill AM Groves RH Noble IR pp 243 271 Australian Academy of Science Canberra, Australia
25. He TH Krauss SL Lamont BB Miller BP Enright NJ 2004 Long distance seed dispersal in a metapopulation of Banksia hookeriana inferred from a population allocation analysis of amplified fragment length polymorphism data Molecular Ecology 13 1099 1109
26. Hewitt G 2000 The genetic legacy of the Quaternary ice ages Nature 405 907 913
27. Hollingsworth PM Ennos RA 2004 Neighbour joining trees, dominant markers and population genetic structure Heredity 92 490 498
28. Hopper SD Gioia P 2004 The southwest Australian floristic region: evolution and conservation of global hotspot of biodiversity Annual Review of Ecology and Systematics 35 623 650
29. Hopper SD Harvey MS Chappill JA Main AR Main BY 1996 The Western Australian biota as Gondwanan heritage - a review In Gondwanan Heritage: Past, Present and Future of the Western Australian Biota (eds Hopper SD Chappill JA Harvey MS George AS pp 1 46 Surrey Beatty Chipping Norton, New South Wales
30. Krauss SL 1998 A phylogeographic analysis of allozyme variation among populations of Persoonia mollis (Proteaceae) Australian Journal of Botany 46 571 582
31. Krauss SL 1999 Complete exclusion of nonsires in an analysis of paternity in a natural plant population using amplified fragment length polymorphism (AFLP) Molecular Ecology 8 217 226
32. Krauss SL 2000 Accurate gene diversity estimates from amplified fragment length polymorphism (AFLP) markers Molecular Ecology 9 1241 1245
33. Lambeck K Chappell J 2001 Sea level change through the last glacial cycle Science 292 679 686
34. Lamont BB Markey A 1995 Biogeography of fire-killed and resprouting Banksia species in southwestern Australia Australian Journal of Botany 43 283 303
35. Lamont BB Enright NJ Bergl SM 1989 Coexistence and competitive exclusion of Banksia hookeriana in the presence of congeneric seedlings along a topographic gradient Oikos 56 39 42
36. Lamont BB Marsula R Enright NJ Witkowski ETF 2001 Conservation requirements of an exploited wildflower: modelling the effects of growing conditions, plant age and picking intensity Biological Conservation 99 157 168
37. Lamont BB He T Enright NJ Krauss SL Miller BP 2003 Anthropogenic disturbance promotes hybridization between Banksia species by altering their biology Journal of Evolutionary Biology 16 551 557
38. Lynch M Milligan BG 1994 Analysis of population genetic structure with RAPD markers Molecular Ecology 3 91 99
39. Mantel N 1967 The detection of disease clustering and a generalized regression approach Cancer Research 27 209 220
40. Mast AR 1998 Molecular systematics of subtribe Banksiinae (Banksia and Dryandra; Proteaceae) based on cpDNA and nrDNA sequence data: implications for taxonomy and biogeography Australian Systematic Botany 11 321 342
41. McKinnon GE Vaillancourt RE Steane DA Potts BM 2004 The rare silver gum, Eucalyptus cordata, is leaving its trace in the organellar gene pool of Eucalyptus globulus Molceular Ecology 13 3751 3763
42. Mejdahl V 1979 Thermoluminescence dating: beta-dose attenuation in quartz grains Archaeometry 21 61 72
43. Murray AS Olley JM 2002 Precision and accuracy in the optically stimulated luminescence dating of sedimentary quartz: a status review Geochronometria 21 1 16
44. Murray AS Roberts RG 1997 Determining the burial time of single grains of quartz using optically stimulated luminescence Earth and Planet Science Letters 152 163 180
45. Murray AS Wintle AG 2000 Luminescence dating of quartz using an improved single-aliquot regenerative-dose protocol Radiation Measurements 32 57 73
46. Myers N Mittermeier RA Mittermeier CG da Fonseca GAB Kent J 2000 Biodiversity hotspots for conservation priorities Nature 403 803 808
47. Nanson GC Price DM Short SA 1992 Wetting and drying of Australia over the past 300 KA Geology 20 791 794
48. Nanson GC Chen XY Price DM 1995 Aeolian and fluvial evidence of changing climate and wind patterns during the past 100 KA in the western Simpson Desert, Australia Palaeogeography, Palaeoclimatology, Palaeoecology 113 87 102
49. Nybom H Bartish IV 2000 Effects of life history traits and sampling strategies on genetic diversity estimates obtained with RAPD markers in plants Perspectives in Plant Ecology, Evolution and Systematics 3/2 93 114
50. Pate JS Beard JS (eds) 1984 Kwongan - Plant Life of the Sandplain The University of Western Australia Press Nedlands, Western Australia
51. Peakall R Smouse PE 2001 genalex (version 5): Genetic analysis in ExcelPopulation genetic software for teaching and research Australian National University Canberra, Australia
52. 14C yr bp Journal of Biogeography 31 1381 1444
53. Prescott JR Hutton JT 1994 Cosmic ray contributions to dose rates for luminescence and ESR dating: large depths and long-term time variations Radiation Measurements 23 497 500
54. Rousset F 1997 Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance Genetics 145 1219 1228
55. Saitou N Nei M 1987 The neighbor-joining method: a new method for reconstructing phylogenetic trees Molecular Biology and Evolution 4 406 405
56. Schaal BA Hayworth DA Olsen KM Rauscher JT Smith WA 1998 Phylogeographic studies in plants: problems and prospects Molecular Ecology 7 465 474
57. Simmons L Beveridge M Krauss SL 2004 Genetic analysis of parentage within experimental populations of a male dimorphic beetle, Onthophagus taurus, using amplified fragment length polymorphism (AFLP) Behavioural Ecology and Sociobiology 57 164 173
58. Stewart JR Lister AM 2001 Cryptic northern refugia and the origins of the modern biota Trends in Ecology &Evolution 16 608 613
59. Stone TN Cupper ML 2003 Last Glacial Maximum ages for robust humans at Kow Swamp, southern Australia Journal of Human Evolution 45 99 111
60. Taberlet P Fumagalli L Wust-Saucy AG Cossons JF 1998 Comparative phylogeography and postglacial colonization routes in Europe Molecular Ecology 7 453 464
61. Taylor A Hopper S 1988 The Banksia Atlas Australian Government Publishing Service Canberra, Australia
62. Thiele K Ladiges PY 1996 A cladistic analysis of Banksia (Proteaceae) Australian Systematic Botany 9 661 733
63. Thom B Hesp P Bryant E 1994 Last glacial 'coastal' dunes in Eastern Australia and implications for landscape stability during the Last Glacial Maximum Palaeogeography, Palaeoclimatology, Palaeoecology 111 229 248
64. Thomas I Enright NJ Kenyon CE 2001 The Holocene history of mediterranean-type plant communities, Little Desert National Park, Victoria, Australia Holocene 11 691 697
65. Thorne A Grün R Mortimer G et al. 1999 Australia's oldest human remains: age of the Lake Mungo 3 skeleton Journal of Human Evolution 36 591 612
66. Vekemans X Beauwens T Lemaire M Roldan-Ruiz I 2002 Data from amplified fragment length polymorphism (AFLP) markers show indication of size homoplasy and of a relationship between degree of homoplasy and fragment size Molecular Ecology 11 139 151
67. Vos P et al. 1995 AFLP: a new technique for DNA fingerprinting NucleicAcids Research 23 4407 4417
68. Williams D Dunkerley D De Decker P Kershaw P Chappell M 1998 Quaternary Environments Arnold London
69. Wills TJ 2003 Using Banksia (Proteaceae) node counts to estimate time since fire Australian Journal of Botany 51 239 242
70. Yeh FC Yang RC Boyle TJB 1999 popgene Version 1.31. Available from
71. Zhivotovsky LA 1999 Estimating population structure in diploids with multilocus dominant DNA markers Molecular Ecology 8 907 913