Differential proteomic analysis of nuclear extracts from thyroid cell lines

Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences

Volumn 833, Issue 1, 2006, Pages 41-50

  Salzano, Anna Maria ^a   Paron, Igor ^c   Pines, Alex ^c   Bachi, Angela ^b   Talamo, Fabio ^a   Bivi, Nicoletta ^c   Vascotto, Carlo ^c   Damante, Giuseppe ^c   Quadrifoglio, Franco ^c   Scaloni, Andrea ^a   Tell, Gianluca ^c  

^a CNR   (Italy)

^b SAN RAFFAELE HOSPITAL   (Italy)

^c UNIVERSITY OF UDINE   (Italy)

Author keywords

APE1 Ref 1; Differential proteomics; Differentiation; Nucleus; Thyroid; Transcriptional regulation

Indexed keywords

ASSAYS; CELL CULTURE; ELECTROPHORESIS; GENES; REDOX REACTIONS;

APE1/REF-1; DIFFERENTIAL PROTEOMICS; DIFFERENTIATION; NUCLEUS; THYROID;

PROTEINS;

DNA (APURINIC OR APYRIMIDINIC SITE) LYASE; GLUTATHIONE TRANSFERASE; NUCLEAR PROTEIN; REDOX EFFECTOR FACTOR 1;

AMINO ACID SEQUENCE; ANIMAL CELL; CARCINOGENESIS; CELL DIFFERENTIATION; CONFERENCE PAPER; IMMUNOPRECIPITATION; MASS SPECTROMETRY; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; NONHUMAN; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN EXPRESSION; PROTEOMICS; RAT; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; THYROID CELL; TWO DIMENSIONAL GEL ELECTROPHORESIS;

ANIMALS; BASE SEQUENCE; BLOTTING, WESTERN; CELL LINE; CELL NUCLEUS; DNA PRIMERS; IMMUNOHISTOCHEMISTRY; IMMUNOPRECIPITATION; NUCLEAR PROTEINS; PROTEOMICS; RATS; RECOMBINANT PROTEINS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; THYROID GLAND;

ANIMALIA;

EID: 33644989337     PISSN: 15700232     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jchromb.2005.12.025     Document Type: Conference Paper

References (42)

1. S. Hanash Nat. Rev. 4 2004 638
2. P. Oh, Y. Li, J. Yu, E. Durr, K.M. Krasinska, L.A. Carver, J.E. Testa, and J.E. Schnitzer Nature 429 2004 629
3. M.J. Page, B. Amess, R.R. Townsend, R. Parekh, A. Herath, L. Brusten, M.J. Zvelebil, R.C. Stein, M.D. Waterfield, S.C. Davies, and M.J. O'Hare Proc. Natl. Acad. Sci. U.S.A. 96 1999 12589
4. K. Struhl Cell 98 1999 1
5. I. Herskowitz Nature 342 1989 749
6. B.M. Spiegelman, and R. Heinrich Cell 119 2004 157
7. A.J. Berk Biochim. Biophys. Acta 1009 1989 103
8. G. Damante, G. Tell, and R. Di Lauro Prog. Nucl. Acids Res. 66 2001 307
9. G. Tell, G. Damante, D. Caldwell, and M.R. Kelley Antioxid. Red Signal 7 2005 367
10. A. Fusco, M.T. Berlingieri, P.P. Di Fiore, G. Portella, M. Greco, and G. Vecchio Mol. Cell Biol. 7 1987 3365
11. L. Perrone, G. Tell, and R. Di Lauro J. Biol. Chem. 274 1999 4640
12. L. Aurisicchio, R. Di Lauro, and M. Tannini J. Biol. Chem. 273 1998 1477
13. F.S. Ambesi-Impiombato, L.A. Parks, and H.G. Coon Proc. Natl. Acad. Sci. U.S.A. 77 1980 3455
14. I. Paron, A. Scaloni, A. Pines, A. Bachi, F.T. Liu, C. Puppin, M. Pandolfi, L. Ledda, C. Di Loreto, G. Damante, and G. Tell Biochem. Biophys. Res. Commun. 302 2003 545
15. B. Thiede, C. Dimmler, F. Siejak, and T. Rudel J. Biol. Chem. 276 2001 26044
16. M.M. Bradford Anal. Biochem. 72 1976 248
17. Y. Xu, D. Moore, J. Broshears, L. Liu, T.M. Wilson, and M.R. Kelley Anticancer Res. 37 1997 13
18. D.H. Moore, H. Michael, R. Tritt, S.H. Parsons, and M.R. Kelley Clin. Cancer Res. 6 2000 602
19. A. Gorg, W. Postel, and S. Gunther Electrophoresis 9 1988 531
20. A. Shevchenko, M. Wilm, O. Vorm, and M. Mann Anal. Chem. 68 1996 850
21. R.D. Appel, and D.F. Hochstrasser Methods Mol. Biol. 112 1999 363
22. F. Talamo, C. D'Ambrosio, S. Arena, P. Del Vecchio, L. Ledda, G. Zehender, L. Ferrara, and A. Scaloni Proteomics 3 2003 440
23. W. Zhang, and B.T. Chait Anal. Chem. 72 2000 2482
24. I. Huq, T.M. Wilson, M.R. Kelley, and W.A. Deutsch Mutat. Res. 337 1995 191
25. G. Tell, L. Pellizzari, C. Pucillo, F. Puglisi, D. Cesselli, M.R. Kelley, C. Di Loreto, and G. Damante J. Mol. Endocrinol. 24 2000 383
26. D. Russo, F. Arturi, S. Bulotta, L. Pellizzari, S. Filetti, G. Manzini, G. Damante, and G. Tell J. Endocrinol. Invest. 24 2001 RC10
27. C.E. Hedinger Schweiz. Med. Wochenschr. 123 1993 1673
28. I. Paron, C. D'Ambrosio, A. Scaloni, M.T. Berlingieri, P.L. Pallante, A. Fusco, N. Bivi, G. Tell, and G. Damante J. Mol. Endocrinol. 34 2005 199
29. W. Ying, K. Zhang, X. Qian, L. Xie, J. Wang, X. Xiang, Y. Cai, and D. Wu Proteomics 3 2003 64
30. S. Balabanov, U. Zimmermann, C. Protzel, C. Scharf, K.J. Klebingat, and R. Walther Eur. J. Biochem. 268 2001 5977
31. A. Scaloni, W. Jones, M. Pospischil, S. Sassa, O. Schneewind, A.M. Popowicz, F. Bossa, S.L. Graziano, and J.M. Manning J. Lab. Clin. Med. 120 1992 546
32. W.M. Jones, A. Scaloni, F. Bossa, A.M. Popowicz, O. Schneewind, and J.M. Manning Proc. Natl. Acad. Sci. U.S.A. 88 1991 2194
33. J.K. Myung, L. Afjehi-Sadat, M. Felizardo-Cabatic, I. Slavc, and G. Lubec Proteome Sci. 2 2004 8
34. S. Gu, Z. Liu, S. Pan, Z. Jiang, H. Lu, O. Amit, E.M. Bradbury, C.A. Hu, and X. Chen Mol. Cell Proteomics 3 2004 998
35. L. Whitesell, and S.L. Lindquist Nat. Rev. Cancer 5 2005 761
36. G. Tell, A. Zecca, L. Pellizzari, P. Spessotto, A. Colombatti, M.R. Kelley, G. Damante, and C. Pucillo Nucleic Acids Res. 28 2000 1099
37. V.V. Philimonenko, J. Zhao, S. Iben, H. Dingova, K. Kysela, M. Kahle, H. Zentgraf, W.A. Hofmann, P. de Lanerolle, P. Hozak, and I. Grummt Nat. Cell Biol. 6 2004 1165
38. K. Zhao, W. Wang, O.J. Rando, Y. Xue, K. Swiderek, A. Kuo, G.R., Cell 625 (1998) 95.
39. J.M. Egly, N.G. Miyamoto, V. Moncollin, and P. Chambon EMBO J. 3 1984 2363
40. S.S. Smith, K.H. Kelly, and B.M. Jockusch Biochem. Biophys. Res. Commun. 86 1979 161
41. R. Duncan, L. Bazar, G. Michelotti, T. Tomonaga, H. Krutzsch, M. Avigan, and D. Levens Genes Dev. 8 1994 465
42. M. Al-Maghrebi, J.T. Anim, and A.A. Olalu Anticancer Res. 25 2005 2573