Identification of quantitative trait loci for δ13C and productivity in irrigated lowland rice

Crop Science

Volumn 46, Issue 2, 2006, Pages 763-773

  Laza, Ma R ^a   Kondo, M ^a   Ideta, O ^a   Barlaan, E ^b   Imbe, T ^a  

^a NATIONAL INSTITUTE OF CROP SCIENCE   (Japan)

^b Nagasaki Industrial Promotion Foundation   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

JAPONICA; ORYZA SATIVA;

EID: 33644983781     PISSN: 0011183X     EISSN: None     Source Type: Journal    
DOI: 10.2135/cropsci2005.05.0084     Document Type: Article

References (50)

1. Acevedo, E. 1993. Potential of carbon isotope discrimination as a selection criterion in barley breeding. p. 339-710. In J.R. Ehleringer, E. Hall, and G.D. Farquhar (ed.) Stable isotopes and plant carbon-water relations. Academic Press, San Diego, CA.
2. Araus, J.L., D. Villegas, N. Aparcio, L.F.G. Moral, S.E. Hani, Y. Rharrabti, J.P. Ferrio, and C. Royo. 2003. Environmental factors determining carbon isotope discrimination and yield in durum wheat under Mediterranean conditions. Crop Sci. 43:170-180.
3. Condon, A.G., G.D. Farquhar, and R.A. Richards. 1990. Genotypic variation in carbon isotope discrimination and transpiration efficiency in wheat. Leaf gas exchange and whole plant studies. Aust. J. Plant Physiol. 17:9-22.
4. Condon, A.G., R.A. Richards, and G.D. Farquhar. 1987. Carbon isotope discrimination is positively correlated with grain yield and dry matter production in field-grown wheat. Crop Sci. 27:996-1001.
5. Cui, K.H., S. Peng, Y.Z. Xing, S.B. Yu, C.G. Xu, and Q. Zhang. 2003. Molecular dissection of the genetic relationships of source, sink and transport tissue with yield traits in rice. Theor. Appl. Genet. 106:649-658.
6. 13C among upland rices having different water use efficiencies. Aust. J. Agric. Res. 42:1123-1131.
7. Farquhar, D.G., M.H. Oleary, and J.A. Berry. 1982. On the relationship between carbon isotope discrimination and the intercellular carbon dioxide concentration in leaves. Aust. J. Plant Physiol. 9:121-202.
8. Farquhar, G.D., and R.A. Richards. 1984. Isotope composition of plant carbon correlated with water-use efficiency of wheat genotypes. Aust. J. Plant Physiol. 11:539-552.
9. Fischer, R.A., D. Rees, K.D. Sayre, Z.M. Lu, A.G. Condon, and A.L. Saavedra. 1998. Wheat yield progress associated with higher stomatal conductance and photosynthetic rate, and cooler canopies. Crop Sci. 38:1467-1475.
10. Geber, M.A., and T.E. Dawson. 1997. Genetic variation in stomatal and biochemical limitations to photosynthesis in the annual plant, Polygonum arenstrum. Oecologia 109:535-546.
11. Groos, C., N. Robert, E. Bervas, and G. Charmet. 2003. Genetic analysis of grain protein-content, grain yield and thousand-kernel weight in bread wheat. Theor. Appl. Genet. 106:1032-1040.
12. 13C) in barley. J. Exp. Bot. 45:1661-1663.
13. Ishimaru, K. 2003. Identification of a locus increasing rice yield and physiological analysis of its function. Plant Physiol. 133:1083-1090.
14. Ishimaru, K., N. Kobayashi, M. Yano, and R. Ohsugi. 2001a. Are contents of Rubisco, soluble protein and nitrogen in flag leaves of rice controlled by the same genetics? J. Exp. Bot. 52:1827-1833.
15. Ishimaru, K., K. Ono, and T. Kashiwagi. 2004. Identification of a new gene controlling plant height in rice using the candidate-gene strategy. Planta 218:388-395.
16. Ishimaru, K., K. Shirota, M. Higa, and Y. Kawamitsu. 2001c. Identification of quantitative trait loci for adaxial and abaxial stomatal frequencies in Oryza sativa. Plant Physiol. Biochem. 39:173-177.
17. Ishimaru, K., M. Yano, N. Aoki, K. Ono, T. Hirose, S.Y. Lin, L. Monna, T. Sasaki, and R. Ohsugi. 2001b. Toward the mapping of physiological and agronomic characters on a rice function map: QTL analysis and comparison between QTLs and expressed sequence tags. Theor. Appl. Genet. 102:793-800.
18. Johnson, R.C. 1993. Carbon isotope discrimination, water relations, and photosynthesis in tall fescues. Crop Sci. 33:169-174.
19. Kearsey, J.K., and H.S. Pooni. 1996. The genetical analysis of quantitative traits. Chapman & Hall, Oxford, UK.
20. Kondo, M., P.P. Pablico, D.V. Aragones, and R. Agbisit. 2004. Genotypic variations in carbon isotope discrimination, transpiration efficiency, and biomass production in rice as affected by soil water conditions and N. Plant Soil 267:165-177.
21. Lander, E.S., P. Green, J. Abrahamson, A. Barlow, and M.J. Daley. 1987. Mapmaker: An interactive computer package for constructing primary genetic linkage map of experimental and natural populations. Genomics 1:174-181.
22. Li, Z.K., S.R.M. Pinson, J.W. Stansel, and W.D. Park. 1995. Identification of quantitative trait loci (QTLs) for heading date and plant height in cultivated rice (Oryza sativa L.). Theor. Appl. Genet. 91:374-381.
23. Liao, C.Y., P. Wu, N. Hu, and K.K. Yi. 2001. Effects of genetic background and environment on QTLs and epistasis for rice (Oryza sativa L.) panicle number. Theor. Appl. Genet. 103:104-111.
24. Lin, H.X., H.R. Qian, J.Y. Zhuang, J. Lu, S.K. Min, Z.M. Xiong, N. Huang, and K.L. Zheng. 1996. RFLP mapping of QTLs for yield and related characters in rice (Oryza sativa L.). Theor. Appl. Genet. 92:920-927.
25. Lu, C., L. Shen, Z. Tan, Y. Xu, P. He, Y. Chen, and L. Zhu. 1997. Comparative mapping of QTLs for agronomic traits of rice across environments by using a doubled-haploid population. Theor. Appl. Genet. 94:145-150.
26. Mae, T. 1997. Physiological nitrogen efficiency in rice: Nitrogen utilization, photosynthesis, and yield potential. Plant Soil 196:201-210.
27. Makino, A. 2003. Rubisco and nitrogen relationships in rice: Leaf photosynthesis and plant growth. Soil Sci. Plant Nutr. (Tokyo) 49:319-327.
28. Maruyama, S., and K. Tajima. 1990. Leaf conductance in japonica and indica rice varieties I. Size, frequency, and aperture of stomata. Jpn. J. Crop Sci. 59:801-808.
29. Menendez, C.M., and A.E. Hall. 1996. Heritability of carbon isotope discrimination and correlations with harvest index in cowpea. Crop Sci. 36:233-238.
30. Miah, M., T. Yoshida, Y. Yamamoto, and Y. Nitta. 1996. Characteristics of dry matter production and partitioning of dry matter to panicles in high yielding semidwarf indica and japonica-indica hybrid rice varieties. Jpn. J. Crop Sci. 65:672-685.
31. Peng, S., K.G. Cassman, S.S. Virmani, J. Sheehy, and G.S. Khush. 1999. Yield potential trends of tropical rice since the release of IR8 and the challenge of increasing rice yield potential. Crop Sci. 39:1552-1559.
32. Peng, S., R.C. Laza, G.S. Khush, A.L. Sanico, R.M. Visperas, and F.V. Garcia. 1998. Transpiration efficiencies of indica and improved tropical japonica rice grown under irrigated conditions. Euphytica 103:103-108.
33. Price, A.H., J.E. Cairns, P. Horton, H.G. Jones, and H. Griffiths. 2002. Linking drought-resistance mechanisms to drought avoidance in upland rice using a QTL approach: Progress and new opportunities to integrate stomatal and mesophyll responses. J. Exp. Bot. 53:989-1004.
34. Rebetzke, G.J., A.G. Condon, R.A. Richards, and G.D. Farquhar. 2002. Selection for reduced carbon isotope discrimination increased aerial biomass and grain yield of rainfed bread wheat. Crop Sci. 42:739-745.
35. 13C discrimination in Oryza sativa L. (In Japanese, with English summary.) Bull. Natl. Inst. Agrobiol. Resource 1:63-84.
36. Saranga, Y., I. Flash, A.H. Paterson, and D. Yakir. 1999. Carbon isotope ratio in cotton varies with growth stage and plant organ. Plant Sci. 142:47-56.
37. Saranga, Y., C.X. Jiang, R.J. Wright, D. Yakir, and A.H. Paterson. 2004. Genetic dissection of cotton physiological responses to arid conditions and their interrelationships with productivity. Plant Cell Environ. 27:263-277.
38. Scott, M.P., J.L. Jane, and M. Soundararajan. 1999. Carbon isotope ratios of amylose, amylopectin and mutant starches. Phytochemistry 52:555-559.
39. Specht, J.E., K. Chase, M. Macrander, G.L. Graef, J. Chung, J.P. Markwell, M. Germann, J.H. Orf, and K.G. Lark. 2001. Soybean response to water: A QTL analysis of drought. Crop Sci. 41:493-509.
40. Teng, S., Q. Qian, D. Zeng, Y. Kunihiro, K. Fujimoto, D. Huang, and L. Zhu. 2004. QTL analysis of leaf photosynthetic rate and related physiological traits in rice (Oryza sativa L.). Euphytica 135:1-7.
41. Teulat, B., O. Merah, X. Sirault, C. Borries, R. Waugh, and D. This. 2002. QTLs for grain carbon isotope discrimination in field-grown barley. Theor. Appl. Genet. 106:118-126.
42. Wright, G.C., K.T. Hubick, and G.D. Farquhar. 1988. Discrimination in carbon isotopes of leaves correlates with water-use efficiency of field-grown peanut cultivars. Aust. J. Plant Physiol. 15:815-825.
43. Wright, G.C., K.T. Hubick, G.D. Farquhar, and R.C. Nageswara. 1993. Genetic and environmental variation in transpiration efficiency and its correlation with carbon isotope discrimination and specific leaf area in peanut. p. 247-267. In J.R. Ehleringer, E. Hall, and G.D. Farquhar (ed.) Stable isotopes and plant carbon-water relations. Academic Press Inc., San Diego, CA.
44. Xiao, J.H., J.M. Li, J. Ming, L.P. Yuan, and S.D. Tanksley. 1996. Identification of QTLs affecting traits of agronomic importance in a recombinant inbred population derived from a subspecific rice cross. Theor. Appl. Genet. 92:230-244.
45. Yan, J., J. Zhu, C. He, M. Benmoussa, and P. Wu. 1998. Molecular dissection of developmental behavior of plant height in rice (Oryza sativa L.). Genetics 150:1257-1265.
46. Yano, M., Y. Harushima, Y. Nagamura, N. Kurata, Y. Minobe, and T. Sasaki. 1997. Identification of quantitative trait loci controlling heading date using a high-density linkage map. Theor. Appl. Genet. 95:1025-1032.
47. Yoshida, S. 1981. Fundamentals of rice crop science. Int. Rice Res. Inst., Los Baños, Philippines.
48. Yu, S.B., J.X. Li, C.G. Xu, Y.F. Tan, X.H. Li, and Q. Zhang. 2002. Identification of quantitative trait loci and epistatic interactions for plant height and heading date in rice. Theor. Appl. Genet. 104:619-625.
49. Zhao, B.Z., M. Kondo, M. Maeda, Y. Ozaki, and J.B. Zhang. 2004. Water-use efficiency and carbon isotope discrimination in two cultivars of upland rice during different developmental stages under three water regimes. Plant Soil 261:61-75.
50. Zhuang, J.Y., H.X. Lin, J. Lu, H.R. Qian, S. Hittalmani, N. Huang, and K.L. Zheng. 1997. Analysis of QTL x environment interaction for yield components and plant height in rice. Theor. Appl. Genet. 95:799-808.