Biochemical characterization of Periplaneta fuliginosa densovirus non-structural protein NS1

Biochemical and Biophysical Research Communications

Volumn 342, Issue 4, 2006, Pages 1188-1196

  Yang, Bo ^a   Zhang, Jiamin ^a   Cai, Dawei ^a   Li, Doulin ^a   Chen, Wuguo ^a   Jiang, Hong ^a   Hu, Yuanyang ^a  

^a WUHAN UNIVERSITY   (China)

Author keywords

ATPase; Far Western; Helicase; NS1; Oligomerization; Periplaneta fuliginosa densovirus; South Western; Yeast two hybrid

Indexed keywords

DNA FRAGMENT; DOUBLE STRANDED DNA; HELICASE; MAGNESIUM ION; MALTOSE BINDING PROTEIN; MANGANESE; NONSTRUCTURAL PROTEIN 1; RECOMBINANT PROTEIN; SINGLE STRANDED DNA; UNCLASSIFIED DRUG; VIRUS DNA; VIRUS PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; COMPLEX FORMATION; CONTROLLED STUDY; DENSOVIRUS; DNA BINDING; DNA REPLICATION; ENZYME ACTIVITY; ENZYME BINDING; LONG TERMINAL REPEAT; MUTAGENESIS; NONHUMAN; OLIGOMERIZATION; PARVOVIRUS; PERIPLANETA; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN EXPRESSION; PROTEIN PROTEIN INTERACTION; PROTEIN PURIFICATION; PROTEIN SYNTHESIS; TERMINAL SEQUENCE;

AMINO ACID SEQUENCE; ANIMALS; BINDING SITES; DENSOVIRUS; DNA, VIRAL; MOLECULAR SEQUENCE DATA; PERIPLANETA; PROTEIN BINDING; VIRAL NONSTRUCTURAL PROTEINS;

DENSOVIRINAE; DENSOVIRUS; DNA VIRUSES; PARVOVIRUS; PERIPLANETA; PERIPLANETA FULIGINOSA DENSOVIRUS; VERTEBRATA;

EID: 33644913102     PISSN: 0006291X     EISSN: 10902104     Source Type: Journal    
DOI: 10.1016/j.bbrc.2006.02.053     Document Type: Article

References (46)

1. P. Tijssen, and M. Bergoin Densonucleosis viruses constitute an increasingly diversified subfamily among the parvoviruses Semin. Virol. 6 1995 347 355
2. B. Dumas, M. Jourdan, A.M. Pascaud, and M. Bergoin Complete nucleotide sequence of the cloned infectious genome of Junonia coenia densovirus reveals an organization unique among parvoviruses Virology 191 1992 202 222
3. F.X. Jousset, M. Jourdan, B. Compagnon, E. Mialhe, J.C. Veyrunes, and M. Bergoin Restriction maps and sequence homologies of two densovirus genomes J. Gen. Virol. 71 1990 2463 2466
4. B.N. Afanasiev, E.E. Galyov, L.P. Buchatsky, and Y.V. Kozlov Nucleotide sequence and genomic organization of Aedes densonucleosis virus Virology 185 1991 323 336
5. Y. Boublik, F.X. Jousset, and M. Bergoin Complete nucleotide sequence and genomic organization of the Aedes albopictus parvovirus (AaPV) pathogenic for Aedes aegypti larvae Virology 200 1994 752 763
6. H. Shike, A.K. Dhar, J.C. Burns, C. Shimizu, F.X. Jousset, K.R. Klimpel, and M. Bergoin Infectious hypodermal and hematopoietic necrosis virus of shrimp is related to mosquito Brevidensoviruses Virology 277 2000 167 177
7. G. Fédière, Y. Li, Z. Zádori, J. Szelei, and P. Tijssen Genome organization of Casphalia extranea densovirus, a new Iteravirus Virology 292 2002 299 308
8. Y. Li, Z. Zádori, H. Bando, R. Dubuc, G. Fédière, J. Szelei, and P. Tijssen Genome organization of the densovirus from Bombyx mori (BmDNV-1) and enzyme activity of its capsid J. Gen. Virol. 82 2001 2821 2825
9. M.A. Mayo Changes to virus taxonomy 2004 Arch. Virol. 150 2004 189 198
10. H.T. Guo, J.M. Zhang, and Y.Y. Hu Complete sequence and organization of Periplaneta fuliginosa densovirus genome Acta Virol. 44 2000 315 322
11. A. Srivastava, E. Lusby, and K. Berns Nucleotide sequence and organization of the adeno-associated virus 2 genome J. Virol. 45 1983 555 564
12. H. Bando, H. Choi, Y. Ito, and S. Kawase Terminal structure of a densovirus implies a hairpin transfer replication which is similar to the model for AAV Virology 179 1990 57 63
13. R.O. Shade, M. Blundell, S.F. Cotmore, P. Tattersall, and C.R. Astell Nucleotide sequence and genome organization of human parvovirus B19 isolated from the serum of a child during aplastic crisis J. Virol. 58 1986 921 936
14. J. Yamagishi, Y. Hu, J. Zheng, and H. Bando Genome organization and mRNA structure of Periplaneta fuliginosa densovirus imply alternative splicing involvement in viral gene expression Arch. Virol. 144 1999 2111 2124
15. K.E. Clemens, D.R. Cerutis, L.R. Burger, Q. Yang, and D.J. Pintel Cloning of minute virus of mice cDNAs and preliminary analysis of individual viral proteins expressed in murine cells J. Virol. 64 1990 3967 3973
16. S.F. Cotmore, J.P.F. Nuesch, and P. Tattersall In vitro excision and replication of 5′ telomeres of minute virus of mice DNA from cloned palindromic concatemer junctions Virology 190 1992 365 377
17. J.A. Chiorini, S.M. Wiener, R.A. Owens, S.R. Kyostio, R.M. Kotin, and B. Safer Sequence requirements for stable binding and function of Rep68 on the adeno-associated virus type 2 inverted terminal repeats J. Virol. 68 1994 7448 7457
18. S.F. Cotmore, and P. Tattersall In vivo resolution of circular plasmids containing concatemer junction fragments from minute virus of mice DNA and their subsequent replication as linear molecules J. Virol. 66 1992 420 431
19. 2-3 J. Virol. 69 1995 1652 1660
20. D.S. Im, and N. Muzyczka The AAV origin binding protein Rep68 is an ATP-dependent site-specific endonuclease with DNA helicase activity Cell 61 1990 447 457
21. R.A. Owens, M.D. Weitzman, S.R. Kyostio, and B.J. Carter Identification of a DNA-binding domain in the amino terminus of adeno-associated virus Rep protein J. Virol. 67 1993 997 1005
22. S.L. Walker, R.S. Wonderling, and R.A. Owens Mutational analysis of the adeno-associated virus Rep68 protein: identification of critical residues necessary for site-specific endonuclease activity J. Virol. 71 1997 2722 2730
23. H.K. Jindal, C.B. Yong, G.M. Wilson, P. Tam, and C.R. Astell Mutations in the NTP-binding motif of minute virus of mice (MVM) NS1 protein uncouple ATPase and DNA helicase functions J. Biol. Chem. 269 1994 3283 3289
24. T.V. Ilyina, and E.V. Koonin Conserved sequence motifs in the initiator proteins for rolling circle DNA replication encoded by diverse replicons from eubacteria, eucaryotes, and archaebacteria Nucleic Acids Res. 20 1992 3279 3285
25. M.C. Jonathan, and B.M. David Helicase structure and mechanism Curr. Opin. Struct. Biol. 12 2002 123 133
26. S. Fields, and R. Sternglanz The two-hybrid system: an assay for protein-protein interactions Trends Genet. 10 1994 286 292
27. C. Guana, P. Lib, P.D. Riggsa, and H. Inouyeb Vectors that facilitate the expression and purification of foreign peptides in Escherichia coli by fusion to maltose-binding protein Gene 67 1988 21 30
28. J.A. Chiorini, M.D. Weitzman, R.A. Owens, E. Urcelay, B. Safer, and R.M. Kotin Biologically active Rep proteins of adeno-associated virus type 2 produced as fusion proteins in Escherichia coli J. Virol. 68 1994 797 804
29. R.D. Henkel, J.L. VandeBerg, and R.A. Walsh A microassay for ATPase Anal. Biochem. 169 1988 312 318
30. H. Liu, M.I. Boulton, and J.W. Davies Maize streak virus coat protein binds single- and double-stranded DNA in vitro J. Gen. Virol. 78 1997 1265 1270
31. D.M. McCarty, D.J. Pereira, I. Zolotukhin, X. Zhou, J.H. Ryan, and N. Muzyczka Identification of linear DNA sequences that specifically bind the adeno-associated virus Rep protein J. Virol. 68 1994 4988 4997
32. A. Kornberg, and T. Baker DNA Replication second ed. 1992 W.H. Freeman New York
33. X. Zhou, I. Zolotukhin, D.S. Im, and N. Muzyczka Biochemical characterization of adeno-associated virus Rep68 DNA helicase and ATPase activities J. Virol. 73 1999 1580 1590
34. S. Santucci, C.B. Andrea, and P. Clertant Bovine papillomavirus type 1 E1 ATPase activity does not depend on binding to DNA nor to viral E2 protein J. Gen. Virol. 76 1995 1129 1140
35. F. Preugschat, D.R. Averett, B.E. Clarke, and D.J.T. Porter A steady-state and pre-steady-state kinetic analysis of the NTPase activity associated with the hepatitis C virus NS3 helicase domain J. Biol. Chem. 271 1996 24449 24457
36. S.W. Matson, S. Tabor, and C.C. Richardson The gene 4 protein of bacteriophage T7. Characterization of helicase activity J. Biol. Chem. 258 1983 14017 14024
37. J.H. LeBowitz, and R. McMacken The Escherichia coli DnaB replication protein is a DNA helicase J. Biol. Chem. 261 1986 4738 4748
38. N. Tutejia, and R. Tutejia Unraveling DNA helicases: Motif, structure, mechanism, and function Eur. J. Biochem. 271 2004 1849 1863
39. 2-3-containing DNA Virology 251 1998 123 131
40. S.F. Cotmore, J.P. Nuesch, and P. Tattersall Asymmetric resolution of a parvovirus palindrome in vitro J. Virol. 67 1993 1579 1589
41. S.F. Cotmore, and P. Tattersall The NS-1 polypeptide of minute virus of mice is covalently attached to the 59 termini of duplex replicative form DNA and progeny single strands J. Virol. 62 1988 851 860
42. S.L. Rhode III Both excision and replication of cloned autonomous parvovirus DNA require the NS1 (rep) protein J. Virol. 63 1989 4249 4256
43. T.M. Lohman Helicase-catalyzed DNA unwinding J. Biol. Chem. 268 1993 2269 2272
44. R.H. Smith, A.J. Spano, and R.M. Kotin The Rep78 gene product of adeno-associated virus (AAV) self-associates to form a hexameric complex in the presence of AAV ori sequences J. Virol. 71 1997 4461 4471
45. J.K. Ahn, Z.W. Pitluk, and D.C. Ward The GC box and TATA transcription control elements in the P38 promoter of the minute virus of mice are necessary and sufficient for transactivation by the nonstructural protein NS1 J. Virol. 66 1992 3776 3783
46. C.E. Harris, R.A. Boden, and C.R. Astell A novel heterogeneous nuclear ribonucleoprotein-like protein interacts with NS1 of the minute virus of mice J. Virol. 73 1999 72 80