Differentiation of species combined into the Burkholderia cepacia complex and related taxa on the basis of their fatty acid patterns

Journal of Clinical Microbiology

Volumn 44, Issue 3, 2006, Pages 1159-1164

  Krejčí, Eva ^a,b   Kroppenstedt, Reiner M ^b  

^a Zdravotniho ustavu se sidlem v Ostrave   (Czech Republic)

^b LEIBNIZ INSTITUTE DSMZ GERMAN COLLECTION OF MICROORGANISMS AND CELL CULTURES   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

FATTY ACID; FATTY ACID ESTER;

ARTICLE; BACTERIAL STRAIN; BACTERIUM ISOLATE; BURKHOLDERIA AMBIFARIA; BURKHOLDERIA CEPACIA COMPLEX; BURKHOLDERIA PYRROCINIA; BURKHOLDERIA VIETNAMIENSIS; FATTY ACID ANALYSIS; HUMAN; LIPID COMPOSITION; NONHUMAN; PANDORAEA; PHENOTYPE; PRIORITY JOURNAL; RALSTONIA; RALSTONIA PICKETTII; SPECIES DIFFERENTIATION; TAXON;

BURKHOLDERIA CEPACIA COMPLEX; BURKHOLDERIA INFECTIONS; FATTY ACIDS; HUMANS; PHENOTYPE; SPECIES SPECIFICITY;

BACTERIA (MICROORGANISMS); BURKHOLDERIA AMBIFARIA; BURKHOLDERIA CEPACIA COMPLEX; BURKHOLDERIA PYRROCINIA; BURKHOLDERIA VIETNAMIENSIS; PANDORAEA; RALSTONIA; RALSTONIA PICKETTII;

EID: 33644885330     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.44.3.1159-1164.2006     Document Type: Article

References (19)

1. Coenye, T., E. Falsen, B. Hoste, M. Ohlén, J. Goris, J. R. W. Govan, K. Kersters, and P. Vandamme. 2000. Description of Pandoraea gen. nov. with Pandoraea apista sp. nov., Pandoraea pulmonicola sp. nov., Pandoraea pnomenusa sp. nov., Pandoraea sputorum sp. nov. and Pandoraea norimbergensis comb. nov. Int. J. Syst. Evol. Microbiol. 50:887-899.
2. Coenye, T., E. Mahenthiralingam, D. Henry, J. J. LiPuma, S. Laevens, M. Gillis, D. P. Speert, and P. Vandamme. 2001. Burkholderia ambifaria sp. nov., a novel member of the Burkholderia cepacia complex including biocontrol and cystic fibrosis-related isolates. Int. J. Syst. Evol. Microbiol. 51:1481-1490.
3. Coenye, T., P. Vandamme, and J. LiPuma. 2003. Ralstonia respiraculi sp. nov., isolated from respiratory tract of cystic fibrosis patients. Int. J. Syst. Evol. Microbiol. 53:1339-1342.
4. Dřevínek, P., H. Hrbáčková, O. Cinek, J. Bartošová, O. Nyč, A. Nemec, and P. Pohunek. 2002. Direct PCR detection of Burkholderia cepacia complex and identification of its genomovars by using sputum as source of DNA. J. Clin. Microbiol. 40:3485-3488.
5. Goris, J., W. Dejonghe, E. Falsen, E. De Clerck, B. Geeraerts, A. Willems, E. M. Top, P. Vandamme, and P. De Vos. 2002. Diversity of transconjugants that acquired plasmid pJP4 or pEMT1 after inoculation of a donor strain in the A- and B-horizon of an agricultural soil and description of Burkholderia hospita sp. nov. and Burkholderia terricola sp. nov. Syst. Appl. Microbiol. 25:340-352.
6. Henry, D. A., E. Mahenthiralingam, P. Vandamme, T. Coenye, and D. P. Speert. 2001. Phenotypic methods for determining genomovar status of the Burkholderia cepacia complex. J. Clin. Microbiol. 39:1073-1078.
7. Lim, Y. W., K. S. Baik, K. S. Han, S. B. Kim, and K. S. Bae. 2003. Burkholderia sordidicola sp. nov., isolated from the white-rot fungus Phanerochaete sordida. Int. J. Syst. Evol. Microbiol. 53:1631-1636.
8. Mahenthiralingam, E., T. Coenye, J. W. Chung, D. P. Speert, J. R. W. Govan, P. Taylor, and P. Vandamme. 2000. Diagnostically and experimentally useful panel of strains from the Burkholderia cepacia complex. J. Clin. Microbiol. 38:910-913.
9. Speert, D. P., D. Henry, P. Vandamme, M. Corey, and E. Mahenthiralingam. 2002. Epidemiology of Burkholderia cepacia complex in patients with cystic fibrosis, Canada. Emerg. Infect. Dis. 8:181-187.
10. Storms, V., N. Van Den Vreken, T. Coenye, E. Mahenthiralingam, J. J. LiPuma, M. Gillis, and P. Vandamme. 2004. Polyphasic characterisation of Burkholderia cepacia-like isolates leading to the emended description of Burkholderia pyrrocinia. Syst. Appl. Microbiol. 27:517-526.
11. Vandamme, P., and T. Coenye. 2004. Taxonomy of the genus Cupriavidus: a tale of lost and found. Int. J. Syst. Evol. Microbiol. 54:2285-2289.
12. Vandamme, P., B. Holmes, T. Coenye, J. Goris, E. Mahethiralingam, J. J. LiPuma, and J. R. W. Govan. 2003. Burkholderia cenocepacia sp. nov.-a new twist to an old story. Res. Microbiol. 154:91-96.
13. Vandamme, P., D. Henry, T. Coenye, S. Nzula, M. Vancanneyt, J. J. LiPuma, D. P. Speert, J. R. W. Govan, and E. Mahenthiralingam. 2002. Burkholderia anthina sp. nov. and Burkholderia pyrrocinia, two additional Burkholderia cepacia complex bacteria, may confound results of new molecular diagnostic tools. FEMS Immunol. Med. Microbiol. 33:143-149.
14. Vandamme, P., E. Mahenthiralingam, B. Holmes, T. Coenye, B. Hoste, P. De Vos, D. Henry, and D. P. Speert. 2000. Identification and population structure of Burkholderia stabilis sp. nov. (formerly Burkholderia cepacia genomovar IV). J. Clin. Microbiol. 38:1042-1047.
15. Vandamme, P., B. Pot, M. Gillis, P. De Vos, K. Kersters, and J. Swings. 1996. Polyphasic taxonomy, a consensus approach to bacterial systematics. Microbiol. Rev. 60:407-438.
16. Vaneechoutte, M., P. Kämpfer, T. De Baere, E. Falsen, and G. Verschraegen. 2004. Wautersia gen. nov., a novel genus accommodating the phylogenetic lineage including Ralstonia eutropha and related species, and proposal of Raistonia [Pseudomonas] syzygii (Roberts et al. 1990) comb. nov. Int. J. Syst. Evol. Microbiol. 54:317-327.
17. Vermis, K., C. Vandekerckhove, H. J. Nelis, and P. A. R. Vandamme. 2002. Evaluation of restriction fragment length polymorphism analysis of 16S rDNA as a tool for genomovar characterization within the Burkholderia cepacia complex. FEMS Microbiol. Lett. 214:1-5.
18. Vermis, K., T. Coenye, E. Mahentbiralingam, H. J. Nelis, and P. Vandamme. 2002. Evaluation of species-specific recA-based PCR tests for genomovar level identification within the Burkholderia cepacia complex. J. Med. Microbiol. 51:937-940.
19. Yabuuchi, E., Y. Kosako, I. Yano, H. Hotta, and Y. Nishiuchi. 1995. Transfer of two Burkholderia and an Alcaligenes species to Ralstonia gen. nov.: proposal of Ralstonia pickettii (Ralston, Palleroni and Doudoroff 1973) comb, nov., Ralstonia solanacearum (Smith 1896) comb. nov. and Ralstonia eutropha (Davis 1969) comb. nov. Microbiol. Immunol. 39:897-904.