A proteomic analysis of Spanish broom (Spartium junceum L.) root growing on a slope condition

Plant Science

Volumn 170, Issue 5, 2006, Pages 926-935

  Di Michele, Michela ^a   Chiatante, Donato ^b   Plomion, Christophe ^c   Scippa, Gabriella Stefania ^a  

^a UNIVERSITY OF MOLISE   (Italy)

^b UNIVERSITY OF INSUBRIA   (Italy)

^c UMR 1202 BIOGECO   (France)

Author keywords

Proteomic; Roots; Slope; Spartium junceum L

Indexed keywords

CELL CULTURE; DNA SEQUENCES; GROWTH KINETICS; MASS SPECTROMETRY; PLANTS (BOTANY); TISSUE;

ROOTS; SLOPE; SPARTIUM JUNCEUM L;

PROTEINS;

TISSUE;

CYTISUS MULTIFLORUS; FABACEAE; SPARTIUM; SPARTIUM JUNCEUM;

EID: 33644849812     PISSN: 01689452     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plantsci.2005.12.020     Document Type: Article

References (67)

1. N.L. Biddington The effects of mechanically induced stress in plants - a review Plant Growth Regul. 4 1986 103 123
2. A. Stokes, and D. Guitard Tree root response to mechanical stress A. Altman Y. Waisel Biology of Root Formation and Development 1997 Plenum Press New York 227 236
3. M.J. Jaffe, and S. Forbes Thigmomorphogensis: the effect of mechanical perturbation on plants Plant Growth Regul. 12 1993 313 324
4. M.J. Jaffe, and R. Biro Thigmomorphogenesis: the effect of mechanical perturbation on the growth of plants, with special reference to anatomical changes, the role of ethylene and interaction with other environmental stresses H. Staples R.C. Staples Stress Physiology in Crop Plants Mussel 1979 Wiley New York 25 59
5. A. Di Iorio, B. Lasserre, G.S. Scippa, and D. Chiatante Root system architecture of Quercus pubescens trees growing on different sloping conditions Ann. Bot. 95 2005 351 361
6. D. Chiatante, G.S. Scippa, A. Di Iorio, and M. Sarnataro Root architecture modified by mechanical stress in seedlings of Fraxinus ornus L. and S. junceum L. growing on slopes K. Radoglou Proceedings of the International Conference Thessaloniki, Greece 2001 477 482
7. D. Chiatante, M. Sarnataro, S. Fusco, A. Di Iorio, and G.S. Scippa Modification of root morphological parameters and root architecture in seedlings of Fraxinus ornus L. and Spartium junceum L. growing on slopes Plant Biosyst. 137 1 2003 47 56
8. D. Chiatante, G.S. Scippa, A. Di Iorio, and M. Sarnataro The influence of steep slopes on root system development J. Plant Growth Regul. 21 2003 247 260
9. B.L. Gartner Root biomechanics and whole plant allocation patterns: responses of tomato to simulated wind J. Exp. Bot. 45 1994 1647 1654
10. A. Stokes, The shape of tree root systems affects root wood strength, Technical report no. 5518, Forschungszentrum Karlsruhe, Germany, 1995, p. 148.
11. M. Goodman, and R. Ennos The effects of soil bulk density on the morphology and anchorage mechanics of the root system of sunflower and maize Ann. Bot. 83 1999 293 302
12. G.H. Salekdeh, J. Siopongco, L.J. Wade, B. Ghareyazie, and J. Bennett Proteomic analysis of rice leaves during drought stress and recovery Proteomics 2 2002 1131 1145
13. T. Majoul, K. Chahed, E. Zamiti, L. Ouelhazi, and R. Ghrir Analysis by two-dimensional electrophoresis of the effect of salt stress on the polypeptide patterns in roots of a salt-tolerant and a salt-sensitive cultivar of wheat Electrophoresis 21 12 2000 2562 2565
14. T. Majoul, E. Bancel, E. Triboi, J.B. Hamida, and G. Branlard Proteomic analysis of the effect of heat stress on hexaploid wheat grain: characterization of heat-responsive protein from total endosperm Proteomics 3 2003 175 183
15. M.S. Bae, E.J. Cho, E.-Y. Choi, and O.K. Park Analysis of the Arabidopsis nuclear proteomes and its response to cold stress Plant J. 36 2003 652 663
16. S. Shen, Y. Jing, and T. Kuang Proteomics approach to identify wound-response related proteins from rice leaf sheat Proteomics 3 2003 527 535
17. B. Futcher, G.I. Latter, P. Monardo, C.S. McLaughlin, and J.I. Garrels A sampling of the yeast proteome Mol. Cell. Biol. 19 1999 7357 7368
18. Anderson, A. Matheson, and N.L. Anderson Back to the future: the human protein index and the agenda for post-proteomic biology Proteomics 1 2001 3 12
19. K. van Wijk Challenges and prospects of plant proteomics Plant Physiol. 126 2001 501 508
20. C. Damerval, D. De Vienne, M. Zivy, and H. Thiellement Technical improvements in two-dimensional electrophoresis increase the level of genetic variation detected in wheat-seedling proteins Electrophoresis 7 1986 52 54
21. L.S. Ramagli, and L.V. Rodriguez Quantitation of microgram amounts of protein in two-dimensional polyacrylamide gel electrophoresis sample buffer Electrophoresis 6 1985 559 563
22. N. Bahrman, C. Plomion, R.J. Petit, and A. Kremer Contribution of two-dimensional electrophoresis of proteins to maritime pine genetics Ann. Sci. For. 54 1997 225 236
23. J. Eng, A.L. McCormack, and J.R. Yates III An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database J. Am. Mass Spectrom. 5 1994 976 989
24. H. Ferry-Dumazet, G. Houel, P. Montalent, L. Moreau, O. Langella, L. Negronil, D. Vincent, C. Lalanne, A. de Daruvar, C. Plomion, M. Zivy, and J. Joets PROTICdb: a web-based application to store, track, query, and compare plant proteome data Proteomics 5 2005 2069 2081
25. F. Granier Extraction of plant proteins for two-dimensional electrophoresis Electrophoresis 9 1988 712 718
26. F.M. Cánovas, E. Dumas-Gaudot, G. Recorbet, J. Jorrin, H.-P. Mock, and M. Rossignol Plant proteome analysis Proteomics 4 2004 285 298
27. U. Mathesius, G. Keijzers, S.H.A. Natera, J.J. Winman, M.A. Djordjevic, and B.G. Rolfe Establishment of a root proteome reference map for the model legume Medicago truncatula using the expressed sequence tag database for peptide mass fingerprinting Proteomics 1 2001 1424 1440
28. T. Majoul, E. Bancel, E. Triboi, J. Ben Hamida, and G. Branlard Proteomic analysis of the effect of heat stress on hexaploid wheat grain: characterization of heat-responsive proteins from non-prolamins fraction Proteomics 4 2004 505 513
29. D. Golldack, and K.-J. Dietz Developmental control and tissue-specificity of salt-induced expression of the vacuolar H+-ATPase in Mesembryanthemum crystallinum Plant Physiol. 125 2001 1643 1654
30. C.A. Hamilton, A.G. Good, and G.J. Taylor Induction of vacuolar ATPase and ATP synthase by aluminum in an aluminum resistant cultivar of Triticum aestivum L. Plant Physiol. 125 2001 2068 2077
31. J.K. Morelli, W. Zhou, J. Yu, C. Lu, and M.E. Vayda Actin deplymerization affects stress-induced translational activity of potato tuber tissue Plant Physiol. 116 1998 1227 1237
32. B.L. Orvar, V. Sangwan, F. Omann, and R. Dhindsa Early steps in cold sensing by plant cells: the role of actin cytoskeleton and membrane fluidity Plant J. 23 6 2000 785 794
33. T. Grune, T. Einheckel, M. Joshi, and K.J.A. Davies Proteolysis in cultured liver epithelial cells during oxidative stress J. Biol. Chem. 270 1995 2344 2351
34. R.A. Creelman, and J.E. Mullet Water deficit modulates gene expression in growing zones of soybean seedlings: analysis of differentially expressed cDNAs, a new b-tubulin gene, and expression of genes encoding cell wall proteins Plant Mol. Biol. 17 1991 591 608
35. P. Nick Signaling to the microtubular cytoskeleton in plants Int. Rev. Cytol. 184 1998 33 80
36. A.C. Timmers, M.C. Auriac, F. De Billy, and G. Truchet Nod factors internalization and microtubular cytoskeleton changes occur concomitantly during nodule differentiation in alfalfa Development 125 1998 339 349
37. M.M. Sikorski, A.E. Szlagowska, and A.B. Legocki cDNA sequences encoding for two homologues of Lupinus luteus L. IPR-like proteins (Accession No. X79974 and X79975 for LlR18A and LlR18B mRNA's respectively) (PGR95-114) Plant Physiol. 110 1995 335 347
38. C. Thonat, C. Mathieu, M. Crevecoeur, C. Penel, T. Gaspar, and N. Boyer Effects of a mechanical stimulation on localization of annexin-like proteins in Bryonia dioica internodes Plant Physiol. 114 1997 981 988
39. I. Kovacs, F. Ayaydin, A. Oberschall, I. Ipacs, S. Bottka, D. Dudits, and E.C. Toth Immunolocalization of a novel annexin-like protein encode by a stress and abscisic acid responsive gene in alfalfa Plant J. 15 1998 185 197
40. G. Breton, A. Vazquez-Tello, J. Danyluk, and F. Sarhan Two novel intrinsic annexins accumulate in wheat membranes in response to low temperature Plant Cell Physiol. 41 2 2000 177 184
41. J.R. Botella, and R.N. Arteca Differential expression of two calmodulin genes in response to physical and chemical stimuli Plant Mol. Biol. 24 1994 757 766
42. J.M. Chittoor, J.E. Leach, and F.F. White Differential induction of a peroxidase gene family during infection of rice by Xanthomonas oryzae pv. Oryzae Mol. Plant-Microbe Interact. 10 1997 861 871
43. A. Moons, E. Prinsen, G. Bauw, and M. Van Montagu Antagonistic effects of abscisic acid and jasmonates on salt stress-inducible transcripts in rice roots Plant Cell 9 1997 2243 2259
44. R. Velasco, F. Salamini, and D. Bartels Dehydration and ABA increase mRNA levels and enzyme activity of cytosolic GAPDH in the resurrection plant Craterostigma plantagineum Plant Mol. Biol. 26 1994 541 546
45. C. Pinheiro, M.M. Chaves, and C.P. Ricardo Alterations in carbon and nitrogen metabolism induced by water deficit in the stems and leaves of Lupinus albus L. J. Exp. Bot. 358 2001 1063 1070
46. Y.H. Cheong, H.-S. Chang, R. Gupta, X. Wang, T. Zhu, and S. Luan Transcriptional profiling reveals novel interactions between wounding, pathogen, abiotic stress and hormonal responses in Arabidopsis Plant Physiol. 129 2002 661 677
47. M. Umeda, C. Hara, Y. Matsubayashi, H.H. Li, Q. Liu, F. Tadokoro, S. Aotsuka, and H. Uchimiya Expressed sequence tags from cultured cells of rice (Oryza sativa L.) under stressed conditions: analysis of genes engaged in ATP-generating pathways Plant Mol. Biol. 25 1994 469 478
48. F. Riccardi, P. Gazeau, D. de Vienne, and M. Zivy Protein changes in response to progressive water deficit in maize. Quantitative variation and polypeptide identification Plant Physiol. 117 1998 1253 1263
49. W.-C. Chou, Y.-W. Huang, W.-S. Tsay, T.-Y. Chiang, D.-D. Huang, and H.-J. Huang Expression of genes encoding the rice translation initiation factor, eIF5A, is involved in developmental and environmental responses Physiol. Plant 121 2004 50 57
50. D. Todaka, H. Matsushima, and Y. Morohashi Water stress enhances beta-amylase activity in cucumber cotyledons J. Exp. Bot. 51 2000 739 745
51. M. Ventelon-Debout, F. Delalande, J.-P. Brizard, H. Diemer, A.V. Dorsselaer, and C. Brugidou Proteome analysis of cultivar-specific deregulations of Oryza sativa indica and O. sativa japonica cellular suspensions undergoing Rice yellow mottle virus infection Proteomics 4 2004 216 225
52. M. Seki, M. Narusaka, J. Ishida, T. Nanjo, M. Fujita, Y. Oono, A. Kamiya, M. Nakajima, A. Enju, T. Sakurai, M. Satou, K. Akiyama, T. Taji, K. Yamaguchi-Shinozaki, P. Carninci, J. Kawai, Y. Hayazhisaki, and K. Shinozaki Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray Plant J. 31 2002 279 292
53. M. Tadege, M. Bucher, W. Stahl, M. Suter, I. Dupuis, and C. Kuhlemeier Activation of plant defense responses and sugar efflux by expression of pyruvate decarboxylase in potato leaves Plant J. 16 1998 661 671
54. D. Minhas, and A. Grover Transcript levels of genes encoding various glycolytic and fermentation enzymes change in response to abiotic stress Plant Sci. 146 1999 41 51
55. C. Potenza, S.H. Thomas, and C. Sengupta-Gopalan Genes induced during early response to Meloidogyne incognita in roots of resistant and susceptible alfalfa cultivars Plant Sci. 161 2 2001 289 299
56. K.F. McCue, and A.D. Hanson Salt-inducible betaine aldehyde dehydrogenase from sugar beet: cDNA cloning and expression Plant Mol. Biol. 8 1 1992 1 11
57. R. Sunkar, D. Bartels, and H.H. Kirch Overexpression of a stress-inducible aldehyde dehydrogenase gene from Arabidopsis thaliana in transgenic plants improves stress tolerance Plant J. 35 2003 452 464
58. E.A. Bray Classification of gene differentially expressed during water deficit stress in Arabidopsis thaliana: an analysis using microarray and differential expressed data Ann. Bot. 89 2002 803 811
59. Y.H. Cheong, H.-S. Chang, R. Gupta, X. Wang, T. Zhu, and S. Luan Transcriptional profiling reveals novel interactions between wounding, pathogen, abiotic stress and hormonal responses in Arabidopsis Plant Physiol. 129 2002 661 677
60. R. Brouquisse, J.P. Gadillere, and P. Raymond Induction of a carbon-starvation-related proteolysis in whole maize plants submitted to light/dark cycles and to extended darkness Plant Physiol. 96 1998 619 626
61. G. De Jaegher, and N. Boyer Specific inhibition of lignification in Bryonia dioica. Effects on thigmomorphogenesis Plant Physiol. 84 1987 10 11
62. N. Wang, J.P. Butler, and D.E. Ingber Mechanotransduction across the cell surface and through the cytoskeleton Science 260 1993 1124 1127
63. E.B. Blancaflor, D.L. Jones, and S. Gilroy Alterations in the cytoskeleton accompany aluminum-induced growth inhibition and morphological changes in primary roots of maize Plant Physiol. 118 1998 159 172
64. G.B. Clark, D.S. Rafati, R.J. Bolton, M. Dauwalder, and S.J. Roux Redistribution of annexin in gravistimulated pea plumules Plant Physiol. Biochem. 39 2000 937 947
65. C.E. Pankhurst, and D.R. Biggs Sensitivity of Rhizobium to selected isoflavonoids Can. J. Microbiol. 26 1980 512 545
66. N.K. Peters, and D.P.S. Verma Phenolic compounds as regulators of gene expression in plant-microbe interactions Mol. Plant-Microbe Interact. 3 1990 4 8
67. D.P. Dixon, A. Lapthorn, and R. Edwards Plant glutathione transferases Genome Biol. 3 2002 3004.1 3004.10 (reviews)